RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 HERVK_113P61574 105 aa6.92□□□□□ -1.3
SNF8-210ENST00000511214 WFDC2Q14508 124 aa6.92□□□□□ -1.3
SNF8-210ENST00000511214 ZFAND2AQ8N6M9 145 aa6.92□□□□□ -1.3
SNF8-210ENST00000511214 BAALCQ8WXS3 180 aa6.92□□□□□ -1.3
SNF8-210ENST00000511214 SPOCK3Q9BQ16 436 aa6.92□□□□□ -1.3
SNF8-210ENST00000511214 TSSC4Q9Y5U2 329 aaPredicted RBP6.92□□□□□ -1.3
SNF8-210ENST00000511214 FRYLO94915 3013 aa6.91□□□□□ -1.3
SNF8-210ENST00000511214 IGHV3-35A0A0C4DH35 117 aa6.91□□□□□ -1.3
SNF8-210ENST00000511214 A0A1B0GV72 72 aa6.91□□□□□ -1.3
SNF8-210ENST00000511214 H3BMG7 143 aa6.91□□□□□ -1.3
SNF8-210ENST00000511214 SOCS3O14543 225 aa6.91□□□□□ -1.3
SNF8-210ENST00000511214 ZFP36P26651 326 aaKnown RBP6.91□□□□□ -1.3
SNF8-210ENST00000511214 SMCPP49901 116 aaPredicted RBP6.91□□□□□ -1.3
SNF8-210ENST00000511214 UBE2D1P51668 147 aa6.91□□□□□ -1.3
SNF8-210ENST00000511214 C2orf66Q6UXQ4 117 aa6.91□□□□□ -1.3
SNF8-210ENST00000511214 C5orf56Q8N8D9 126 aa6.91□□□□□ -1.3
SNF8-210ENST00000511214 DLX4Q92988 240 aaPredicted RBP6.91□□□□□ -1.3
SNF8-210ENST00000511214 TMEM141Q96I45 108 aa6.91□□□□□ -1.3
SNF8-210ENST00000511214 SPAG8Q99932 426 aaPredicted RBP6.91□□□□□ -1.3
SNF8-210ENST00000511214 PRADC1Q9BSG0 188 aa6.91□□□□□ -1.3
SNF8-210ENST00000511214 ABCA1O95477 2261 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 FREM2Q5SZK8 3169 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 IGHV3OR16-8A0A075B7F1 116 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 TRAV41A0A0B4J266 112 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 PRSS29PA6NIE9 313 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 CCL21O00585 134 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 LY6HO94772 140 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 COX6B1P14854 86 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 S100A4P26447 101 aaKnown RBP6.9□□□□□ -1.3
SNF8-210ENST00000511214 SCGB2A2Q13296 93 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 TCTEX1D4Q5JR98 221 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 PRR9Q5T870 116 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 MORN3Q6PF18 240 aaPredicted RBP6.9□□□□□ -1.3
SNF8-210ENST00000511214 USMG5Q96IX5 58 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 TIMM17AQ99595 171 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 CYSLTR1Q9Y271 337 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 MOB4Q9Y3A3 225 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 PHLDA3Q9Y5J5 127 aa6.9□□□□□ -1.3
SNF8-210ENST00000511214 MUC3AQ02505 3323 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 TRBV20-1A0A075B6N2 111 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 IGHV3-66A0A0C4DH42 116 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 ZNF815PA8K554 130 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 G3V318 75 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 M0QXV9 152 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 NPFFO15130 113 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 GRNP28799 593 aaKnown RBP6.89□□□□□ -1.31
SNF8-210ENST00000511214 SAA4P35542 130 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 ARL3P36405 182 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 NBL1P41271 181 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 ADORA2A-AS1P86434 159 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 ETDBQ3ZM63 59 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 CFAP126Q5VTH2 177 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 MTURNQ8N3F0 131 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 C20orf173Q96LM9 149 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 C1QTNF4Q9BXJ3 329 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 PGPEP1Q9NXJ5 209 aa6.89□□□□□ -1.31
SNF8-210ENST00000511214 TRBV6-5A0A0K0K1A5 114 aa6.88□□□□□ -1.31
SNF8-210ENST00000511214 C11orf86A6NJI1 115 aa6.88□□□□□ -1.31
SNF8-210ENST00000511214 VCYO14598 125 aa6.88□□□□□ -1.31
SNF8-210ENST00000511214 IGF1P05019 195 aa6.88□□□□□ -1.31
SNF8-210ENST00000511214 UBE2D3P61077 147 aa6.88□□□□□ -1.31
SNF8-210ENST00000511214 UBE2D2P62837 147 aa6.88□□□□□ -1.31
SNF8-210ENST00000511214 TCF15Q12870 199 aa6.88□□□□□ -1.31
SNF8-210ENST00000511214 PMVKQ15126 192 aa6.88□□□□□ -1.31
SNF8-210ENST00000511214 ANXA2RQ3ZCQ2 193 aa6.88□□□□□ -1.31
SNF8-210ENST00000511214 GPHB5Q86YW7 130 aa6.88□□□□□ -1.31
SNF8-210ENST00000511214 SBSPONQ8IVN8 264 aa6.88□□□□□ -1.31
SNF8-210ENST00000511214 GTSF1LQ9H1H1 148 aa6.88□□□□□ -1.31
SNF8-210ENST00000511214 MRPL16Q9NX20 251 aaKnown RBP6.88□□□□□ -1.31
SNF8-210ENST00000511214 SELENOKQ9Y6D0 94 aa6.88□□□□□ -1.31
SNF8-210ENST00000511214 KIF25-AS1Q9Y6Z4 181 aa6.88□□□□□ -1.31
SNF8-210ENST00000511214 PKDREJQ9NTG1 2253 aa6.88□□□□□ -1.31
SNF8-210ENST00000511214 IGIPA6NJ69 53 aa6.87□□□□□ -1.31
SNF8-210ENST00000511214 APOMO95445 188 aa6.87□□□□□ -1.31
SNF8-210ENST00000511214 CD7P09564 240 aa6.87□□□□□ -1.31
SNF8-210ENST00000511214 RNASE3P12724 160 aaKnown RBP6.87□□□□□ -1.31
SNF8-210ENST00000511214 POLR2KP53803 58 aaKnown RBP6.87□□□□□ -1.31
SNF8-210ENST00000511214 UCNP55089 124 aa6.87□□□□□ -1.31
SNF8-210ENST00000511214 KLRB1Q12918 225 aa6.87□□□□□ -1.31
SNF8-210ENST00000511214 FOXI1Q12951 378 aa6.87□□□□□ -1.31
SNF8-210ENST00000511214 SCGB1D4Q6XE38 83 aa6.87□□□□□ -1.31
SNF8-210ENST00000511214 SH2D6Q7Z4S9 175 aa6.87□□□□□ -1.31
SNF8-210ENST00000511214 C14orf178Q8N769 122 aaPredicted RBP6.87□□□□□ -1.31
SNF8-210ENST00000511214 RPL39LQ96EH5 51 aaKnown RBP6.87□□□□□ -1.31
SNF8-210ENST00000511214 ROS1P08922 2347 aa6.86□□□□□ -1.31
SNF8-210ENST00000511214 IGLV4-69A0A075B6H9 119 aa6.86□□□□□ -1.31
SNF8-210ENST00000511214 IGHV3OR16-13A0A075B7E8 117 aa6.86□□□□□ -1.31
SNF8-210ENST00000511214 IGHV3-49A0A0A0MS15 119 aa6.86□□□□□ -1.31
SNF8-210ENST00000511214 IGHV3-74A0A0B4J1X5 117 aa6.86□□□□□ -1.31
SNF8-210ENST00000511214 A0A0J9YY99 117 aa6.86□□□□□ -1.31
SNF8-210ENST00000511214 KLLNB2CW77 178 aa6.86□□□□□ -1.31
SNF8-210ENST00000511214 TSPAN13O95857 204 aa6.86□□□□□ -1.31
SNF8-210ENST00000511214 MGPP08493 103 aa6.86□□□□□ -1.31
SNF8-210ENST00000511214 LINC00315P59091 139 aa6.86□□□□□ -1.31
SNF8-210ENST00000511214 LMO4P61968 165 aa6.86□□□□□ -1.31
SNF8-210ENST00000511214 SMAGPQ0VAQ4 97 aa6.86□□□□□ -1.31
SNF8-210ENST00000511214 SRSF9Q13242 221 aaKnown RBP eCLIP6.86□□□□□ -1.31
SNF8-210ENST00000511214 RHOHQ15669 191 aa6.86□□□□□ -1.31
SNF8-210ENST00000511214 AMTNQ6UX39 209 aa6.86□□□□□ -1.31
SNF8-210ENST00000511214 PPDPFLQ8WWR9 84 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms