RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 SNRPEP62304 92 aaKnown RBP3.9□□□□□ -1.79
PHF3-210ENST00000509876 LINC01559Q495D7 138 aa3.9□□□□□ -1.79
PHF3-210ENST00000509876 ZC2HC1AQ96GY0 325 aa3.9□□□□□ -1.79
PHF3-210ENST00000509876 K7EQD1 137 aa3.9□□□□□ -1.79
PHF3-210ENST00000509876 BRWD1-AS2P59051 145 aa3.9□□□□□ -1.79
PHF3-210ENST00000509876 ZNF726P1Q15940 193 aa3.9□□□□□ -1.79
PHF3-210ENST00000509876 PATE2Q6UY27 113 aa3.9□□□□□ -1.79
PHF3-210ENST00000509876 ADAMTSL5Q6ZMM2 481 aa3.9□□□□□ -1.79
PHF3-210ENST00000509876 NDUFAF3Q9BU61 184 aa3.9□□□□□ -1.79
PHF3-210ENST00000509876 TMEM242Q9NWH2 141 aa3.9□□□□□ -1.79
PHF3-210ENST00000509876 A0A096LPF7 62 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 KIR2DL5BA0A0G2JN68 375 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 KIR2DL5BA0A0G2JPC4 375 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 K7EQG2 157 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 KIR2DL5AQ8N109 375 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 KIR2DL5BQ8NHK3 375 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 NCR2O95944 276 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 PSMB2P49721 201 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 RAB37Q96AX2 223 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 DNAJC30Q96LL9 226 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 NDUFS6O75380 124 aaKnown RBP3.89□□□□□ -1.79
PHF3-210ENST00000509876 CHCHD1Q96BP2 118 aaKnown RBP3.89□□□□□ -1.79
PHF3-210ENST00000509876 DMRT1Q9Y5R6 373 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 ZNF561-AS1K7EIQ3 104 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 BRI3O95415 125 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 GYPEP15421 78 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 PMCHL1Q16048 86 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 FAM231DQ6ZW35 169 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 IGKV3D-20A0A0C4DH25 116 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 TMEM238LA0A1B0GVL6 79 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 A6NJY4 79 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 GNRH2O43555 120 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 SRSF3P84103 164 aaKnown RBP3.89□□□□□ -1.79
PHF3-210ENST00000509876 OXLD1Q5BKU9 147 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 GFI1BQ5VTD9 330 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 LINC00469Q8N7U9 141 aa3.89□□□□□ -1.79
PHF3-210ENST00000509876 MRPL36Q9P0J6 103 aaKnown RBP3.89□□□□□ -1.79
PHF3-210ENST00000509876 DEFB4AO15263 64 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 EGR2P11161 476 aaPredicted RBP3.88□□□□□ -1.79
PHF3-210ENST00000509876 RPL13AP40429 203 aaKnown RBP3.88□□□□□ -1.79
PHF3-210ENST00000509876 IFITM2Q01629 132 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 JOSD1Q15040 202 aaPredicted RBP3.88□□□□□ -1.79
PHF3-210ENST00000509876 Q8N2B8 174 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 LINC00482Q8N8I6 264 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 CACNA1AO00555 2505 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 RASL10AQ92737 203 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 C11orf52Q96A22 123 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 RNF183Q96D59 192 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 CHTOPQ9Y3Y2 248 aaKnown RBP3.88□□□□□ -1.79
PHF3-210ENST00000509876 TRBV7-9A0A0J9YWB2 115 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 LINC00587B1AMM8 73 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 TYMSP04818 313 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 GAGE6Q13070 117 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 HIST2H2BDQ6DRA6 164 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 TM2D2Q9BX73 214 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 ZFAND3Q9H8U3 227 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 HHLA3Q9XRX5 114 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 IGLC2P0DOY2 106 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 ATP6V0E2Q8NHE4 81 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 ESM1Q9NQ30 184 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 IGKV1D-37A0A075B6S9 117 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 TRAV10A0A0B4J240 114 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 H3BMM0 161 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 LINC00614P0C842 121 aa3.88□□□□□ -1.79
PHF3-210ENST00000509876 DEFA6Q01524 100 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 CBY1Q9Y3M2 126 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 WNK2Q9Y3S1 2297 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 IGKV2D-24A0A075B6R9 120 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 ANGP03950 147 aaKnown RBP3.87□□□□□ -1.79
PHF3-210ENST00000509876 KRTAP24-1Q3LI83 254 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 OR13C6PQ8NH95 151 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 M0R143 59 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 PHOX2AO14813 284 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 MED14OSP0DP75 135 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 PROK1P58294 105 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 AMN1Q8IY45 258 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 FAM110AQ9BQ89 295 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 DOPEY2Q9Y3R5 2298 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 NCOA6Q14686 2063 aaPredicted RBP3.87□□□□□ -1.79
PHF3-210ENST00000509876 TRAV4A0A0B4J268 109 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 TNFRSF6BO95407 300 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 NHLRC4P0CG21 123 aaPredicted RBP3.87□□□□□ -1.79
PHF3-210ENST00000509876 TCTAP57738 103 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 NIT2Q9NQR4 276 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 AKAP6Q13023 2319 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 TRAV13-1A0A0B4J241 112 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 IGHV3-38A0A0C4DH36 116 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 DAZ2Q13117 558 aaKnown RBP3.87□□□□□ -1.79
PHF3-210ENST00000509876 DAZ4Q86SG3 579 aaKnown RBP3.87□□□□□ -1.79
PHF3-210ENST00000509876 Q8N1Y9 231 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 TMEM141Q96I45 108 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 C11orf68Q9H3H3 251 aaKnown RBP3.87□□□□□ -1.79
PHF3-210ENST00000509876 DAZ3Q9NR90 486 aaKnown RBP3.87□□□□□ -1.79
PHF3-210ENST00000509876 IGKV1OR2-108A0A075B7D4 117 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 RBMY1BA6NDE4 496 aaKnown RBP3.87□□□□□ -1.79
PHF3-210ENST00000509876 RBMY1EA6NEQ0 496 aaKnown RBP3.87□□□□□ -1.79
PHF3-210ENST00000509876 PRAC2D3DTV9 90 aa3.87□□□□□ -1.79
PHF3-210ENST00000509876 RBMY1DP0C7P1 496 aaKnown RBP3.87□□□□□ -1.79
PHF3-210ENST00000509876 RBMY1A1P0DJD3 496 aaKnown RBP3.87□□□□□ -1.79
PHF3-210ENST00000509876 RBMY1CP0DJD4 496 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms