RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 KRBOX1C9JBD0 128 aa10.25□□□□□ -0.77
RNF4-208ENST00000507247 ORM1P02763 201 aa10.25□□□□□ -0.77
RNF4-208ENST00000507247 HTN1P15515 57 aa10.25□□□□□ -0.77
RNF4-208ENST00000507247 AZU1P20160 251 aa10.25□□□□□ -0.77
RNF4-208ENST00000507247 PNRC1Q12796 327 aaPredicted RBP10.25□□□□□ -0.77
RNF4-208ENST00000507247 TDRG1Q3Y452 100 aa10.25□□□□□ -0.77
RNF4-208ENST00000507247 IBA57Q5T440 356 aaKnown RBP10.25□□□□□ -0.77
RNF4-208ENST00000507247 FAM159AQ6UWV7 190 aa10.25□□□□□ -0.77
RNF4-208ENST00000507247 FAM231DQ6ZW35 169 aa10.25□□□□□ -0.77
RNF4-208ENST00000507247 ZNF575Q86XF7 245 aa10.25□□□□□ -0.77
RNF4-208ENST00000507247 DAZAP1Q96EP5 407 aaKnown RBP10.25□□□□□ -0.77
RNF4-208ENST00000507247 LINC00467Q9BRT7 94 aa10.25□□□□□ -0.77
RNF4-208ENST00000507247 TP53TG1Q9Y2A0 90 aa10.25□□□□□ -0.77
RNF4-208ENST00000507247 TMSB15BA0A087X1C1 80 aa10.24□□□□□ -0.77
RNF4-208ENST00000507247 B4DEV8 164 aa10.24□□□□□ -0.77
RNF4-208ENST00000507247 GNRH2O43555 120 aa10.24□□□□□ -0.77
RNF4-208ENST00000507247 P01737 135 aa10.24□□□□□ -0.77
RNF4-208ENST00000507247 TYMSP04818 313 aa10.24□□□□□ -0.77
RNF4-208ENST00000507247 ERVFC1-1P60608 527 aa10.24□□□□□ -0.77
RNF4-208ENST00000507247 OR11H2Q8NH07 326 aa10.24□□□□□ -0.77
RNF4-208ENST00000507247 SFRP2Q96HF1 295 aa10.24□□□□□ -0.77
RNF4-208ENST00000507247 NEU1Q99519 415 aa10.24□□□□□ -0.77
RNF4-208ENST00000507247 OSTCQ9NRP0 149 aa10.24□□□□□ -0.77
RNF4-208ENST00000507247 TMEM189A5PLL7 270 aa10.23□□□□□ -0.77
RNF4-208ENST00000507247 GATCO43716 136 aaKnown RBP10.23□□□□□ -0.77
RNF4-208ENST00000507247 APOC3P02656 99 aa10.23□□□□□ -0.77
RNF4-208ENST00000507247 OR2D3Q8NGH3 330 aa10.23□□□□□ -0.77
RNF4-208ENST00000507247 SPATA25Q9BR10 227 aa10.23□□□□□ -0.77
RNF4-208ENST00000507247 RPP21Q9H633 154 aaKnown RBP10.23□□□□□ -0.77
RNF4-208ENST00000507247 GRIFINA4D1Z8 144 aa10.22□□□□□ -0.77
RNF4-208ENST00000507247 CBY3A6NI87 242 aa10.22□□□□□ -0.77
RNF4-208ENST00000507247 RRN3P1Q2M238 152 aa10.22□□□□□ -0.77
RNF4-208ENST00000507247 OR10G8Q8NGN5 311 aa10.22□□□□□ -0.77
RNF4-208ENST00000507247 RNASE8Q8TDE3 154 aaKnown RBP10.22□□□□□ -0.77
RNF4-208ENST00000507247 KCNS1Q96KK3 526 aa10.22□□□□□ -0.77
RNF4-208ENST00000507247 V9GYV3 84 aa10.22□□□□□ -0.77
RNF4-208ENST00000507247 IGHV3-16A0A0C4DH30 117 aa10.21□□□□□ -0.77
RNF4-208ENST00000507247 PLAC8L1A1L4L8 177 aa10.21□□□□□ -0.77
RNF4-208ENST00000507247 GZMBP10144 247 aa10.21□□□□□ -0.77
RNF4-208ENST00000507247 RNF212Q495C1 297 aa10.21□□□□□ -0.77
RNF4-208ENST00000507247 C15orf54Q8N8G6 183 aa10.21□□□□□ -0.77
RNF4-208ENST00000507247 Q8NAQ8 132 aa10.21□□□□□ -0.77
RNF4-208ENST00000507247 C11orf72Q8NBR9 251 aa10.21□□□□□ -0.77
RNF4-208ENST00000507247 CLRN3Q8NCR9 226 aa10.21□□□□□ -0.77
RNF4-208ENST00000507247 MDFICQ9P1T7 246 aa10.21□□□□□ -0.77
RNF4-208ENST00000507247 TRGV11A0A075B6L2 103 aa10.2□□□□□ -0.78
RNF4-208ENST00000507247 IGHV4-28A0A0C4DH34 117 aa10.2□□□□□ -0.78
RNF4-208ENST00000507247 SMIM9A6NGZ8 99 aa10.2□□□□□ -0.78
RNF4-208ENST00000507247 RNASE3P12724 160 aaKnown RBP10.2□□□□□ -0.78
RNF4-208ENST00000507247 TMEM263Q8WUH6 116 aaKnown RBP10.2□□□□□ -0.78
RNF4-208ENST00000507247 DEFB4AO15263 64 aa10.19□□□□□ -0.78
RNF4-208ENST00000507247 CXCL1P09341 107 aa10.19□□□□□ -0.78
RNF4-208ENST00000507247 MIFP14174 115 aa10.19□□□□□ -0.78
RNF4-208ENST00000507247 ASIPP42127 132 aa10.19□□□□□ -0.78
RNF4-208ENST00000507247 CT83Q5H943 113 aa10.19□□□□□ -0.78
RNF4-208ENST00000507247 DNLZQ5SXM8 178 aa10.19□□□□□ -0.78
RNF4-208ENST00000507247 SVBPQ8N300 66 aa10.19□□□□□ -0.78
RNF4-208ENST00000507247 IL17DQ8TAD2 202 aa10.19□□□□□ -0.78
RNF4-208ENST00000507247 C16orf74Q96GX8 76 aa10.19□□□□□ -0.78
RNF4-208ENST00000507247 GSN-AS1Q9NRJ2 163 aa10.19□□□□□ -0.78
RNF4-208ENST00000507247 MUC4Q99102 2169 aa10.19□□□□□ -0.78
RNF4-208ENST00000507247 C7orf77A4D0Y5 90 aa10.18□□□□□ -0.78
RNF4-208ENST00000507247 H3BVH4 76 aa10.18□□□□□ -0.78
RNF4-208ENST00000507247 ATP6V1G1O75348 118 aa10.18□□□□□ -0.78
RNF4-208ENST00000507247 IGLC6P0CF74 106 aa10.18□□□□□ -0.78
RNF4-208ENST00000507247 RPS20P60866 119 aaKnown RBP10.18□□□□□ -0.78
RNF4-208ENST00000507247 ZNF415Q09FC8 603 aa10.18□□□□□ -0.78
RNF4-208ENST00000507247 ZNF493Q6ZR52 646 aa10.18□□□□□ -0.78
RNF4-208ENST00000507247 GTSF1Q8WW33 167 aa10.18□□□□□ -0.78
RNF4-208ENST00000507247 ANAPC16Q96DE5 110 aa10.18□□□□□ -0.78
RNF4-208ENST00000507247 C9orf85Q96MD7 179 aa10.18□□□□□ -0.78
RNF4-208ENST00000507247 ZMAT4Q9H898 229 aa10.18□□□□□ -0.78
RNF4-208ENST00000507247 A8MWL6 223 aa10.17□□□□□ -0.78
RNF4-208ENST00000507247 PPP1R2P9O14990 202 aa10.17□□□□□ -0.78
RNF4-208ENST00000507247 SNAPINO95295 136 aa10.17□□□□□ -0.78
RNF4-208ENST00000507247 MT-ND4LP03901 98 aa10.17□□□□□ -0.78
RNF4-208ENST00000507247 ARMS2P0C7Q2 107 aa10.17□□□□□ -0.78
RNF4-208ENST00000507247 S100A4P26447 101 aaKnown RBP10.17□□□□□ -0.78
RNF4-208ENST00000507247 TCL1AP56279 114 aa10.17□□□□□ -0.78
RNF4-208ENST00000507247 RHEBQ15382 184 aa10.17□□□□□ -0.78
RNF4-208ENST00000507247 ATRAIDQ6UW56 229 aa10.17□□□□□ -0.78
RNF4-208ENST00000507247 TIMM8BQ9Y5J9 83 aaPredicted RBP10.17□□□□□ -0.78
RNF4-208ENST00000507247 XKRY2A2RUG3 117 aa10.16□□□□□ -0.78
RNF4-208ENST00000507247 SNAI2O43623 268 aa10.16□□□□□ -0.78
RNF4-208ENST00000507247 EMP1P54849 157 aa10.16□□□□□ -0.78
RNF4-208ENST00000507247 TSKUQ8WUA8 353 aa10.16□□□□□ -0.78
RNF4-208ENST00000507247 RPS10P5Q9NQ39 176 aa10.16□□□□□ -0.78
RNF4-208ENST00000507247 IL36BQ9NZH7 164 aa10.16□□□□□ -0.78
RNF4-208ENST00000507247 SNURFLB1AK76 121 aa10.15□□□□□ -0.78
RNF4-208ENST00000507247 NHLRC4P0CG21 123 aaPredicted RBP10.15□□□□□ -0.78
RNF4-208ENST00000507247 MED14OSP0DP75 135 aa10.15□□□□□ -0.78
RNF4-208ENST00000507247 FER1L6-AS1Q8NA97 138 aa10.15□□□□□ -0.78
RNF4-208ENST00000507247 SSBP4Q9BWG4 385 aaPredicted RBP10.15□□□□□ -0.78
RNF4-208ENST00000507247 C11orf68Q9H3H3 251 aaKnown RBP10.15□□□□□ -0.78
RNF4-208ENST00000507247 NOP10Q9NPE3 64 aaKnown RBP10.15□□□□□ -0.78
RNF4-208ENST00000507247 SCRT2Q9NQ03 307 aa10.15□□□□□ -0.78
RNF4-208ENST00000507247 A0A087WWC5 75 aa10.14□□□□□ -0.79
RNF4-208ENST00000507247 MUC21A0A0G2JKD1 596 aa10.14□□□□□ -0.79
RNF4-208ENST00000507247 A0A0J9YWU9 116 aa10.14□□□□□ -0.79
RNF4-208ENST00000507247 MUC21A0A140T8X8 626 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms