RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 GAGE12IP0CL82 117 aa14.29□□□□□ -0.12
HERC6-205ENST00000504905 ZNF80P51504 273 aaPredicted RBP14.29□□□□□ -0.12
HERC6-205ENST00000504905 TMEM183BQ1AE95 376 aa14.29□□□□□ -0.12
HERC6-205ENST00000504905 TMEM183AQ8IXX5 376 aa14.29□□□□□ -0.12
HERC6-205ENST00000504905 LINC00612Q8N6U2 182 aa14.29□□□□□ -0.12
HERC6-205ENST00000504905 KLF12Q9Y4X4 402 aa14.29□□□□□ -0.12
HERC6-205ENST00000504905 PFN1P07737 140 aaKnown RBP14.28□□□□□ -0.12
HERC6-205ENST00000504905 TDRG1Q3Y452 100 aa14.28□□□□□ -0.12
HERC6-205ENST00000504905 APLNQ9ULZ1 77 aa14.28□□□□□ -0.12
HERC6-205ENST00000504905 TRGV1A0A0A0MS02 117 aa14.27□□□□□ -0.13
HERC6-205ENST00000504905 SCO2A0A1W2PP80 73 aa14.27□□□□□ -0.13
HERC6-205ENST00000504905 Q6ZTI0 123 aa14.27□□□□□ -0.13
HERC6-205ENST00000504905 KCNS1Q96KK3 526 aa14.27□□□□□ -0.13
HERC6-205ENST00000504905 FAM210BQ96KR6 192 aa14.27□□□□□ -0.13
HERC6-205ENST00000504905 NDUFAF3Q9BU61 184 aa14.27□□□□□ -0.13
HERC6-205ENST00000504905 SDF2L1Q9HCN8 221 aa14.27□□□□□ -0.13
HERC6-205ENST00000504905 ZFP30Q9Y2G7 519 aa14.27□□□□□ -0.13
HERC6-205ENST00000504905 HERC2O95714 4834 aa14.27□□□□□ -0.13
HERC6-205ENST00000504905 TRBV6-1A0A0K0K1D8 114 aa14.26□□□□□ -0.13
HERC6-205ENST00000504905 F5H768 121 aa14.26□□□□□ -0.13
HERC6-205ENST00000504905 LY6G6CO95867 125 aa14.26□□□□□ -0.13
HERC6-205ENST00000504905 IFNA1P01562 189 aa14.26□□□□□ -0.13
HERC6-205ENST00000504905 MDFICQ9P1T7 246 aa14.26□□□□□ -0.13
HERC6-205ENST00000504905 GNRH2O43555 120 aa14.25□□□□□ -0.13
HERC6-205ENST00000504905 SPINK4O60575 86 aa14.25□□□□□ -0.13
HERC6-205ENST00000504905 S100A9P06702 114 aaKnown RBP14.25□□□□□ -0.13
HERC6-205ENST00000504905 TXNDC17Q9BRA2 123 aa14.25□□□□□ -0.13
HERC6-205ENST00000504905 TRGV2A0A075B6R0 118 aa14.24□□□□□ -0.13
HERC6-205ENST00000504905 LTAP01374 205 aa14.24□□□□□ -0.13
HERC6-205ENST00000504905 TYMSP04818 313 aa14.24□□□□□ -0.13
HERC6-205ENST00000504905 BLOC1S1P78537 153 aa14.24□□□□□ -0.13
HERC6-205ENST00000504905 LGALS9BQ3B8N2 356 aa14.24□□□□□ -0.13
HERC6-205ENST00000504905 TMEM88Q6PEY1 159 aa14.24□□□□□ -0.13
HERC6-205ENST00000504905 IGHV3-16A0A0C4DH30 117 aa14.23□□□□□ -0.13
HERC6-205ENST00000504905 FABP5P3A8MUU1 101 aa14.23□□□□□ -0.13
HERC6-205ENST00000504905 ZC2HC1AQ96GY0 325 aa14.23□□□□□ -0.13
HERC6-205ENST00000504905 SPXQ9BT56 116 aa14.23□□□□□ -0.13
HERC6-205ENST00000504905 MRPL16Q9NX20 251 aaKnown RBP14.23□□□□□ -0.13
HERC6-205ENST00000504905 C11orf21Q9P2W6 132 aa14.23□□□□□ -0.13
HERC6-205ENST00000504905 LGALS9CQ6DKI2 356 aa14.22□□□□□ -0.13
HERC6-205ENST00000504905 BCL2P10415 239 aa14.21□□□□□ -0.13
HERC6-205ENST00000504905 MEF2BQ02080 365 aaPredicted RBP14.21□□□□□ -0.13
HERC6-205ENST00000504905 COX8CQ7Z4L0 72 aa14.21□□□□□ -0.13
HERC6-205ENST00000504905 C18orf15Q96N68 181 aa14.21□□□□□ -0.13
HERC6-205ENST00000504905 TAGLN2P37802 199 aaKnown RBP14.2□□□□□ -0.14
HERC6-205ENST00000504905 OR5I1Q13606 314 aa14.2□□□□□ -0.14
HERC6-205ENST00000504905 FAM162BQ5T6X4 162 aa14.2□□□□□ -0.14
HERC6-205ENST00000504905 TEX261Q6UWH6 196 aa14.2□□□□□ -0.14
HERC6-205ENST00000504905 C11orf52Q96A22 123 aa14.2□□□□□ -0.14
HERC6-205ENST00000504905 VAX2Q9UIW0 290 aa14.2□□□□□ -0.14
HERC6-205ENST00000504905 PCLOQ9Y6V0 5065 aa14.19□□□□□ -0.14
HERC6-205ENST00000504905 PDE6DO43924 150 aa14.19□□□□□ -0.14
HERC6-205ENST00000504905 RPL35P42766 123 aaKnown RBP14.19□□□□□ -0.14
HERC6-205ENST00000504905 BAGE2Q86Y30 109 aa14.19□□□□□ -0.14
HERC6-205ENST00000504905 C15orf53Q8NAA6 179 aa14.19□□□□□ -0.14
HERC6-205ENST00000504905 NHLRC2Q8NBF2 726 aa14.19□□□□□ -0.14
HERC6-205ENST00000504905 KMT2AQ03164 3969 aa14.18□□□□□ -0.14
HERC6-205ENST00000504905 M0R2P5 195 aa14.18□□□□□ -0.14
HERC6-205ENST00000504905 SH2D1AO60880 128 aa14.18□□□□□ -0.14
HERC6-205ENST00000504905 ORM1P02763 201 aa14.18□□□□□ -0.14
HERC6-205ENST00000504905 HOXA5P20719 270 aa14.18□□□□□ -0.14
HERC6-205ENST00000504905 CRIP1P50238 77 aa14.18□□□□□ -0.14
HERC6-205ENST00000504905 IGKV3D-20A0A0C4DH25 116 aa14.17□□□□□ -0.14
HERC6-205ENST00000504905 B4DEV8 164 aa14.17□□□□□ -0.14
HERC6-205ENST00000504905 ZNF674Q2M3X9 581 aa14.17□□□□□ -0.14
HERC6-205ENST00000504905 RASL10AQ92737 203 aa14.17□□□□□ -0.14
HERC6-205ENST00000504905 DERL1Q9BUN8 251 aa14.17□□□□□ -0.14
HERC6-205ENST00000504905 MUC4Q99102 2169 aa14.17□□□□□ -0.14
HERC6-205ENST00000504905 IGHV3-53P01767 116 aa14.16□□□□□ -0.14
HERC6-205ENST00000504905 P0DMU3 169 aa14.16□□□□□ -0.14
HERC6-205ENST00000504905 FAM231AP0DMU4 169 aa14.16□□□□□ -0.14
HERC6-205ENST00000504905 FAM231CP0DMU5 169 aa14.16□□□□□ -0.14
HERC6-205ENST00000504905 LYPD6BQ8NI32 183 aa14.16□□□□□ -0.14
HERC6-205ENST00000504905 TRAV26-1A0A087WT03 109 aa14.15□□□□□ -0.14
HERC6-205ENST00000504905 M0R036 132 aa14.15□□□□□ -0.14
HERC6-205ENST00000504905 NUDT3O95989 172 aa14.15□□□□□ -0.14
HERC6-205ENST00000504905 S100A4P26447 101 aaKnown RBP14.15□□□□□ -0.14
HERC6-205ENST00000504905 MLST8Q9BVC4 326 aa14.15□□□□□ -0.14
HERC6-205ENST00000504905 MED9Q9NWA0 146 aa14.15□□□□□ -0.14
HERC6-205ENST00000504905 DNAH10Q8IVF4 4471 aa14.14□□□□□ -0.15
HERC6-205ENST00000504905 KRBOX1C9JBD0 128 aa14.14□□□□□ -0.15
HERC6-205ENST00000504905 ASIPP42127 132 aa14.14□□□□□ -0.15
HERC6-205ENST00000504905 C9orf85Q96MD7 179 aa14.14□□□□□ -0.15
HERC6-205ENST00000504905 A0A0J9YY99 117 aa14.13□□□□□ -0.15
HERC6-205ENST00000504905 RBFOX3A6NFN3 312 aa14.13□□□□□ -0.15
HERC6-205ENST00000504905 RNASE3P12724 160 aaKnown RBP14.13□□□□□ -0.15
HERC6-205ENST00000504905 CENPWQ5EE01 88 aa14.13□□□□□ -0.15
HERC6-205ENST00000504905 C9JCJ5 164 aa14.12□□□□□ -0.15
HERC6-205ENST00000504905 GNG4P50150 75 aa14.12□□□□□ -0.15
HERC6-205ENST00000504905 LINC01559Q495D7 138 aa14.12□□□□□ -0.15
HERC6-205ENST00000504905 ZNF876PQ49A33 203 aa14.12□□□□□ -0.15
HERC6-205ENST00000504905 PRR27Q6MZM9 219 aa14.12□□□□□ -0.15
HERC6-205ENST00000504905 UBE2DNLQ8IWF7 75 aa14.12□□□□□ -0.15
HERC6-205ENST00000504905 TMSB15BA0A087X1C1 80 aa14.11□□□□□ -0.15
HERC6-205ENST00000504905 TRAV4A0A0B4J268 109 aa14.11□□□□□ -0.15
HERC6-205ENST00000504905 RAB19A4D1S5 217 aa14.11□□□□□ -0.15
HERC6-205ENST00000504905 SFTA3P0C7M3 94 aa14.11□□□□□ -0.15
HERC6-205ENST00000504905 OR4C5Q8NGB2 326 aa14.11□□□□□ -0.15
HERC6-205ENST00000504905 TRGV4A0A0C4DH28 118 aa14.1□□□□□ -0.15
HERC6-205ENST00000504905 GRIFINA4D1Z8 144 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms