RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 HIST1H2BAQ96A08 127 aa17.74■□□□□ 0.43
PVT1-201ENST00000504719 C8orf49Q96NF6 230 aa17.74■□□□□ 0.43
PVT1-201ENST00000504719 ARL2-SNX15V9GYD0 113 aa17.74■□□□□ 0.43
PVT1-201ENST00000504719 FBLL1A6NHQ2 334 aaKnown RBP17.73■□□□□ 0.43
PVT1-201ENST00000504719 SULT1A2P50226 295 aa17.73■□□□□ 0.43
PVT1-201ENST00000504719 FAM3BP58499 235 aaPredicted RBP17.73■□□□□ 0.43
PVT1-201ENST00000504719 FAT2Q9NYQ8 4349 aa17.72■□□□□ 0.43
PVT1-201ENST00000504719 TRAV21A0A0B4J279 112 aa17.72■□□□□ 0.43
PVT1-201ENST00000504719 FAM159AQ6UWV7 190 aa17.72■□□□□ 0.43
PVT1-201ENST00000504719 NAGKQ9UJ70 344 aa17.72■□□□□ 0.43
PVT1-201ENST00000504719 RTL8CO15255 209 aa17.71■□□□□ 0.43
PVT1-201ENST00000504719 PPT1P50897 306 aa17.71■□□□□ 0.43
PVT1-201ENST00000504719 NKX2-5P52952 324 aaPredicted RBP17.71■□□□□ 0.43
PVT1-201ENST00000504719 IBA57Q5T440 356 aaKnown RBP17.71■□□□□ 0.43
PVT1-201ENST00000504719 KLF12Q9Y4X4 402 aa17.71■□□□□ 0.43
PVT1-201ENST00000504719 TCL1AP56279 114 aa17.7■□□□□ 0.42
PVT1-201ENST00000504719 OR5I1Q13606 314 aa17.7■□□□□ 0.42
PVT1-201ENST00000504719 Q6ZTI0 123 aa17.7■□□□□ 0.42
PVT1-201ENST00000504719 TCEAL7Q9BRU2 100 aa17.7■□□□□ 0.42
PVT1-201ENST00000504719 GCGP01275 180 aa17.69■□□□□ 0.42
PVT1-201ENST00000504719 HOXA5P20719 270 aa17.69■□□□□ 0.42
PVT1-201ENST00000504719 ZNF80P51504 273 aaPredicted RBP17.69■□□□□ 0.42
PVT1-201ENST00000504719 CCL20P78556 96 aa17.69■□□□□ 0.42
PVT1-201ENST00000504719 SAPCD1Q5SSQ6 148 aa17.69■□□□□ 0.42
PVT1-201ENST00000504719 TRAV1-1A0A0B4J248 108 aa17.68■□□□□ 0.42
PVT1-201ENST00000504719 ZNF415Q09FC8 603 aa17.68■□□□□ 0.42
PVT1-201ENST00000504719 TMEM183BQ1AE95 376 aa17.68■□□□□ 0.42
PVT1-201ENST00000504719 SMUG1Q53HV7 270 aa17.68■□□□□ 0.42
PVT1-201ENST00000504719 Q86TA4 180 aa17.68■□□□□ 0.42
PVT1-201ENST00000504719 TMEM183AQ8IXX5 376 aa17.68■□□□□ 0.42
PVT1-201ENST00000504719 TRAV26-1A0A087WT03 109 aa17.67■□□□□ 0.42
PVT1-201ENST00000504719 TDRG1Q3Y452 100 aa17.67■□□□□ 0.42
PVT1-201ENST00000504719 MDFICQ9P1T7 246 aa17.67■□□□□ 0.42
PVT1-201ENST00000504719 TRGV11A0A075B6L2 103 aa17.66■□□□□ 0.42
PVT1-201ENST00000504719 TRGV1A0A0A0MS02 117 aa17.66■□□□□ 0.42
PVT1-201ENST00000504719 A0A1B0GVY2 172 aa17.66■□□□□ 0.42
PVT1-201ENST00000504719 PRSS29PA6NIE9 313 aa17.66■□□□□ 0.42
PVT1-201ENST00000504719 TEX46H3BTG2 121 aa17.66■□□□□ 0.42
PVT1-201ENST00000504719 SPINK4O60575 86 aa17.66■□□□□ 0.42
PVT1-201ENST00000504719 CCL18P55774 89 aa17.66■□□□□ 0.42
PVT1-201ENST00000504719 FMC1Q96HJ9 113 aa17.66■□□□□ 0.42
PVT1-201ENST00000504719 C18orf15Q96N68 181 aa17.66■□□□□ 0.42
PVT1-201ENST00000504719 GNG13Q9P2W3 67 aa17.66■□□□□ 0.42
PVT1-201ENST00000504719 LINC00588Q9Y4M8 146 aa17.66■□□□□ 0.42
PVT1-201ENST00000504719 GNRH2O43555 120 aa17.65■□□□□ 0.42
PVT1-201ENST00000504719 PFN1P07737 140 aaKnown RBP17.65■□□□□ 0.42
PVT1-201ENST00000504719 UBE2G1P62253 170 aa17.65■□□□□ 0.42
PVT1-201ENST00000504719 ZNRF2Q8NHG8 242 aa17.65■□□□□ 0.42
PVT1-201ENST00000504719 A0A0J9YY99 117 aa17.64■□□□□ 0.41
PVT1-201ENST00000504719 AKR1C3P42330 323 aa17.64■□□□□ 0.41
PVT1-201ENST00000504719 MANBALQ9NQG1 85 aa17.64■□□□□ 0.41
PVT1-201ENST00000504719 BOLA1Q9Y3E2 137 aa17.64■□□□□ 0.41
PVT1-201ENST00000504719 TRGV2A0A075B6R0 118 aa17.63■□□□□ 0.41
PVT1-201ENST00000504719 SCO2A0A1W2PP80 73 aa17.63■□□□□ 0.41
PVT1-201ENST00000504719 H3BNG1 76 aa17.63■□□□□ 0.41
PVT1-201ENST00000504719 ALKAL2Q6UX46 152 aa17.63■□□□□ 0.41
PVT1-201ENST00000504719 KCNS1Q96KK3 526 aa17.63■□□□□ 0.41
PVT1-201ENST00000504719 SDF2L1Q9HCN8 221 aa17.63■□□□□ 0.41
PVT1-201ENST00000504719 MRPL16Q9NX20 251 aaKnown RBP17.63■□□□□ 0.41
PVT1-201ENST00000504719 C11orf21Q9P2W6 132 aa17.63■□□□□ 0.41
PVT1-201ENST00000504719 MUC4Q99102 2169 aa17.63■□□□□ 0.41
PVT1-201ENST00000504719 TYMSP04818 313 aa17.62■□□□□ 0.41
PVT1-201ENST00000504719 ZFP30Q9Y2G7 519 aa17.62■□□□□ 0.41
PVT1-201ENST00000504719 IGHV3-16A0A0C4DH30 117 aa17.61■□□□□ 0.41
PVT1-201ENST00000504719 TRBV6-1A0A0K0K1D8 114 aa17.6■□□□□ 0.41
PVT1-201ENST00000504719 C1orf134Q5TEV5 83 aa17.6■□□□□ 0.41
PVT1-201ENST00000504719 SPXQ9BT56 116 aa17.6■□□□□ 0.41
PVT1-201ENST00000504719 NBDYA0A0U1RRE5 68 aa17.59■□□□□ 0.41
PVT1-201ENST00000504719 LTAP01374 205 aa17.59■□□□□ 0.41
PVT1-201ENST00000504719 SOHLH1Q5JUK2 328 aa17.59■□□□□ 0.41
PVT1-201ENST00000504719 ZC2HC1AQ96GY0 325 aa17.59■□□□□ 0.41
PVT1-201ENST00000504719 FABP5P3A8MUU1 101 aa17.58■□□□□ 0.4
PVT1-201ENST00000504719 COX8CQ7Z4L0 72 aa17.58■□□□□ 0.4
PVT1-201ENST00000504719 VSIG2Q96IQ7 327 aa17.58■□□□□ 0.4
PVT1-201ENST00000504719 S100A9P06702 114 aaKnown RBP17.57■□□□□ 0.4
PVT1-201ENST00000504719 CRIP1P50238 77 aa17.57■□□□□ 0.4
PVT1-201ENST00000504719 IFNA1P01562 189 aa17.56■□□□□ 0.4
PVT1-201ENST00000504719 ESRGQ1W209 222 aa17.56■□□□□ 0.4
PVT1-201ENST00000504719 NHLRC2Q8NBF2 726 aa17.55■□□□□ 0.4
PVT1-201ENST00000504719 TXNDC17Q9BRA2 123 aa17.55■□□□□ 0.4
PVT1-201ENST00000504719 Q9H8V8 135 aa17.55■□□□□ 0.4
PVT1-201ENST00000504719 PKD1P98161 4303 aa17.55■□□□□ 0.4
PVT1-201ENST00000504719 A0A096LPF7 62 aa17.54■□□□□ 0.4
PVT1-201ENST00000504719 IGKV3D-20A0A0C4DH25 116 aa17.54■□□□□ 0.4
PVT1-201ENST00000504719 M0R2P5 195 aa17.54■□□□□ 0.4
PVT1-201ENST00000504719 IGHV3-53P01767 116 aa17.54■□□□□ 0.4
PVT1-201ENST00000504719 RASL10AQ92737 203 aa17.54■□□□□ 0.4
PVT1-201ENST00000504719 PKHD1P08F94 4074 aa17.54■□□□□ 0.4
PVT1-201ENST00000504719 SH2D1AO60880 128 aa17.53■□□□□ 0.4
PVT1-201ENST00000504719 BCL2P10415 239 aa17.53■□□□□ 0.4
PVT1-201ENST00000504719 BLOC1S1P78537 153 aa17.53■□□□□ 0.4
PVT1-201ENST00000504719 MEF2BQ02080 365 aaPredicted RBP17.53■□□□□ 0.4
PVT1-201ENST00000504719 FAM162BQ5T6X4 162 aa17.53■□□□□ 0.4
PVT1-201ENST00000504719 C11orf52Q96A22 123 aa17.53■□□□□ 0.4
PVT1-201ENST00000504719 UPK3BQ9BT76 320 aa17.53■□□□□ 0.4
PVT1-201ENST00000504719 ORM1P02763 201 aa17.52■□□□□ 0.4
PVT1-201ENST00000504719 RPL35P42766 123 aaKnown RBP17.52■□□□□ 0.4
PVT1-201ENST00000504719 ZNF674Q2M3X9 581 aa17.52■□□□□ 0.4
PVT1-201ENST00000504719 BAGE2Q86Y30 109 aa17.52■□□□□ 0.4
PVT1-201ENST00000504719 HERC2O95714 4834 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms