RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 TMEM78Q5T7P6 136 aa5.9□□□□□ -1.47
NEDD9-208ENST00000504387 TEX36Q5VZQ5 186 aa5.9□□□□□ -1.47
NEDD9-208ENST00000504387 CFAP161Q6P656 301 aa5.9□□□□□ -1.47
NEDD9-208ENST00000504387 SPATA25Q9BR10 227 aa5.9□□□□□ -1.47
NEDD9-208ENST00000504387 SMPXQ9UHP9 88 aa5.9□□□□□ -1.47
NEDD9-208ENST00000504387 U3KQK5 164 aa5.9□□□□□ -1.47
NEDD9-208ENST00000504387 GATA4P43694 442 aa5.89□□□□□ -1.47
NEDD9-208ENST00000504387 LAGE3Q14657 143 aa5.89□□□□□ -1.47
NEDD9-208ENST00000504387 ECSCRQ19T08 205 aa5.89□□□□□ -1.47
NEDD9-208ENST00000504387 Q6ZUT4 128 aa5.89□□□□□ -1.47
NEDD9-208ENST00000504387 C14orf178Q8N769 122 aaPredicted RBP5.89□□□□□ -1.47
NEDD9-208ENST00000504387 NXT2Q9NPJ8 142 aaKnown RBP5.89□□□□□ -1.47
NEDD9-208ENST00000504387 TMEM14CQ9P0S9 112 aa5.89□□□□□ -1.47
NEDD9-208ENST00000504387 CENPEQ02224 2701 aa5.89□□□□□ -1.47
NEDD9-208ENST00000504387 BUB1B-PAK6H3BSN5 160 aa5.89□□□□□ -1.47
NEDD9-208ENST00000504387 RPL11P62913 178 aaKnown RBP5.89□□□□□ -1.47
NEDD9-208ENST00000504387 PRO0461Q9UI25 63 aa5.89□□□□□ -1.47
NEDD9-208ENST00000504387 TRAV8-2A0A0B4J237 113 aa5.89□□□□□ -1.47
NEDD9-208ENST00000504387 IGKV3D-20A0A0C4DH25 116 aa5.89□□□□□ -1.47
NEDD9-208ENST00000504387 MYMXA0A1B0GTQ4 84 aa5.89□□□□□ -1.47
NEDD9-208ENST00000504387 SCGB2A1O75556 95 aa5.89□□□□□ -1.47
NEDD9-208ENST00000504387 THBDP07204 575 aa5.89□□□□□ -1.47
NEDD9-208ENST00000504387 LGALS1P09382 135 aaKnown RBP5.89□□□□□ -1.47
NEDD9-208ENST00000504387 S100A4P26447 101 aaKnown RBP5.89□□□□□ -1.47
NEDD9-208ENST00000504387 TRPT1Q86TN4 253 aaKnown RBP5.89□□□□□ -1.47
NEDD9-208ENST00000504387 CACNA1AO00555 2505 aa5.88□□□□□ -1.47
NEDD9-208ENST00000504387 ATP5LO75964 103 aa5.88□□□□□ -1.47
NEDD9-208ENST00000504387 HOXB4P17483 251 aaPredicted RBP5.88□□□□□ -1.47
NEDD9-208ENST00000504387 CRIP2P52943 208 aaPredicted RBP5.88□□□□□ -1.47
NEDD9-208ENST00000504387 Q1RN00 199 aa5.88□□□□□ -1.47
NEDD9-208ENST00000504387 TMEM170BQ5T4T1 132 aa5.88□□□□□ -1.47
NEDD9-208ENST00000504387 Q6ZS92 163 aa5.88□□□□□ -1.47
NEDD9-208ENST00000504387 ZNF575Q86XF7 245 aa5.88□□□□□ -1.47
NEDD9-208ENST00000504387 DLX4Q92988 240 aaPredicted RBP5.88□□□□□ -1.47
NEDD9-208ENST00000504387 CARD19Q96LW7 228 aa5.88□□□□□ -1.47
NEDD9-208ENST00000504387 ZNF48Q96MX3 618 aaPredicted RBP5.88□□□□□ -1.47
NEDD9-208ENST00000504387 C1QTNF4Q9BXJ3 329 aa5.88□□□□□ -1.47
NEDD9-208ENST00000504387 C21orf62Q9NYP8 219 aa5.88□□□□□ -1.47
NEDD9-208ENST00000504387 HIGD1BQ9P298 99 aa5.88□□□□□ -1.47
NEDD9-208ENST00000504387 SMAD5-AS1Q9Y6J3 95 aa5.88□□□□□ -1.47
NEDD9-208ENST00000504387 IGHV4-39P01824 125 aa5.88□□□□□ -1.47
NEDD9-208ENST00000504387 NPC2P61916 151 aa5.88□□□□□ -1.47
NEDD9-208ENST00000504387 TMEM155Q4W5P6 130 aa5.88□□□□□ -1.47
NEDD9-208ENST00000504387 SETD2Q9BYW2 2564 aaPredicted RBP5.88□□□□□ -1.47
NEDD9-208ENST00000504387 A0A087WX48 190 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 TSPAN13O95857 204 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 TCL1BO95988 128 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 MFAP4P55083 255 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 Q6ZS46 218 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 ADARB2-AS1A8MUL3 147 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 C9JAW5 83 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 CCL21O00585 134 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 MRPS12O15235 138 aaKnown RBP5.87□□□□□ -1.47
NEDD9-208ENST00000504387 IGLC6P0CF74 106 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 SCGB1A1P11684 91 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 SMIM20Q8N5G0 67 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 Q8N8P6 123 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 AGPAT4-IT1Q9H0P7 198 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 LINC00574Q9H8X3 128 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 CSMD2Q7Z408 3487 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 TRBV7-3A0A075B6L6 115 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 INS-IGF2F8WCM5 200 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 IGHG4P01861 327 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 CLEC3BP05452 202 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 SRD5A1P18405 259 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 IGFL2Q6UWQ7 119 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 ANKRD29Q8N6D5 301 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 ZMAT4Q9H898 229 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 FAM208BQ5VWN6 2430 aa5.87□□□□□ -1.47
NEDD9-208ENST00000504387 SRSF1Q07955 248 aaKnown RBP eCLIP5.86□□□□□ -1.47
NEDD9-208ENST00000504387 CFAP126Q5VTH2 177 aa5.86□□□□□ -1.47
NEDD9-208ENST00000504387 CLEC19AQ6UXS0 136 aa5.86□□□□□ -1.47
NEDD9-208ENST00000504387 FANCD2OSQ96PS1 177 aa5.86□□□□□ -1.47
NEDD9-208ENST00000504387 F5H697 171 aa5.86□□□□□ -1.47
NEDD9-208ENST00000504387 F8VRH5 84 aa5.86□□□□□ -1.47
NEDD9-208ENST00000504387 H7C1H1 209 aa5.86□□□□□ -1.47
NEDD9-208ENST00000504387 CRLF1O75462 422 aa5.86□□□□□ -1.47
NEDD9-208ENST00000504387 DLX6P56179 175 aa5.86□□□□□ -1.47
NEDD9-208ENST00000504387 RPL39P62891 51 aaKnown RBP5.86□□□□□ -1.47
NEDD9-208ENST00000504387 PVRIGQ6DKI7 326 aa5.86□□□□□ -1.47
NEDD9-208ENST00000504387 ASCL5Q7RTU5 278 aa5.86□□□□□ -1.47
NEDD9-208ENST00000504387 TEX29Q8N6K0 151 aa5.86□□□□□ -1.47
NEDD9-208ENST00000504387 OPRPNQ99935 248 aaPredicted RBP5.86□□□□□ -1.47
NEDD9-208ENST00000504387 F6UB75 175 aa5.86□□□□□ -1.47
NEDD9-208ENST00000504387 DUSP14O95147 198 aaKnown RBP5.86□□□□□ -1.47
NEDD9-208ENST00000504387 CRYGBP07316 175 aa5.86□□□□□ -1.47
NEDD9-208ENST00000504387 AJUBAQ96IF1 538 aa5.86□□□□□ -1.47
NEDD9-208ENST00000504387 JPT2Q9H910 190 aa5.86□□□□□ -1.47
NEDD9-208ENST00000504387 TRAV2A0A0B4J234 112 aa5.85□□□□□ -1.47
NEDD9-208ENST00000504387 NBR2O15453 112 aa5.85□□□□□ -1.47
NEDD9-208ENST00000504387 FAM74A4Q5TZK3 123 aa5.85□□□□□ -1.47
NEDD9-208ENST00000504387 C2orf66Q6UXQ4 117 aa5.85□□□□□ -1.47
NEDD9-208ENST00000504387 PIP4P1Q86T03 277 aa5.85□□□□□ -1.47
NEDD9-208ENST00000504387 USP9YO00507 2555 aaPredicted RBP5.85□□□□□ -1.47
NEDD9-208ENST00000504387 TRAV4A0A0B4J268 109 aa5.85□□□□□ -1.47
NEDD9-208ENST00000504387 A8MWV9 139 aa5.85□□□□□ -1.47
NEDD9-208ENST00000504387 G3V318 75 aa5.85□□□□□ -1.47
NEDD9-208ENST00000504387 CCDC179H3BU77 68 aa5.85□□□□□ -1.47
NEDD9-208ENST00000504387 IGLV1-47P01700 117 aa5.85□□□□□ -1.47
NEDD9-208ENST00000504387 ZNF672Q499Z4 452 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms