RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 PRSS1P07477 247 aa12.54□□□□□ -0.4
VCAN-204ENST00000502527 SLC25A16P16260 332 aa12.54□□□□□ -0.4
VCAN-204ENST00000502527 ASIPP42127 132 aa12.54□□□□□ -0.4
VCAN-204ENST00000502527 SMPXQ9UHP9 88 aa12.54□□□□□ -0.4
VCAN-204ENST00000502527 DOPEY1Q5JWR5 2465 aa12.54□□□□□ -0.4
VCAN-204ENST00000502527 CACNA1AO00555 2505 aa12.53□□□□□ -0.4
VCAN-204ENST00000502527 CCL25O15444 150 aa12.53□□□□□ -0.4
VCAN-204ENST00000502527 CD5LO43866 347 aa12.53□□□□□ -0.4
VCAN-204ENST00000502527 S100A4P26447 101 aaKnown RBP12.53□□□□□ -0.4
VCAN-204ENST00000502527 LAGE3Q14657 143 aa12.53□□□□□ -0.4
VCAN-204ENST00000502527 ATP5LO75964 103 aa12.53□□□□□ -0.4
VCAN-204ENST00000502527 MED14OSP0DP75 135 aa12.53□□□□□ -0.4
VCAN-204ENST00000502527 FOSL1P15407 271 aa12.53□□□□□ -0.4
VCAN-204ENST00000502527 ODF1Q14990 250 aa12.53□□□□□ -0.4
VCAN-204ENST00000502527 TMEM95Q3KNT9 176 aa12.53□□□□□ -0.4
VCAN-204ENST00000502527 TMEM97Q5BJF2 176 aa12.53□□□□□ -0.4
VCAN-204ENST00000502527 APRG1Q8IVJ8 170 aa12.53□□□□□ -0.4
VCAN-204ENST00000502527 OR9G4Q8NGQ1 327 aa12.53□□□□□ -0.4
VCAN-204ENST00000502527 ZMAT4Q9H898 229 aa12.53□□□□□ -0.4
VCAN-204ENST00000502527 IGKV3-7A0A075B6H7 116 aa12.52□□□□□ -0.4
VCAN-204ENST00000502527 SIVA1O15304 175 aa12.52□□□□□ -0.4
VCAN-204ENST00000502527 SMIM17P0DL12 118 aa12.52□□□□□ -0.4
VCAN-204ENST00000502527 RNASE4P34096 147 aaKnown RBP12.52□□□□□ -0.4
VCAN-204ENST00000502527 DEFB1P60022 68 aa12.52□□□□□ -0.4
VCAN-204ENST00000502527 SAMD13Q5VXD3 122 aa12.52□□□□□ -0.4
VCAN-204ENST00000502527 LINC01356Q8N9X3 169 aa12.52□□□□□ -0.4
VCAN-204ENST00000502527 F6UB75 175 aa12.52□□□□□ -0.41
VCAN-204ENST00000502527 SEC11AP67812 179 aa12.52□□□□□ -0.41
VCAN-204ENST00000502527 SRSF1Q07955 248 aaKnown RBP eCLIP12.52□□□□□ -0.41
VCAN-204ENST00000502527 ANXA2RQ3ZCQ2 193 aa12.52□□□□□ -0.41
VCAN-204ENST00000502527 PHLDA3Q9Y5J5 127 aa12.52□□□□□ -0.41
VCAN-204ENST00000502527 COL12A1Q99715 3063 aa12.51□□□□□ -0.41
VCAN-204ENST00000502527 A1L4Q6 167 aa12.51□□□□□ -0.41
VCAN-204ENST00000502527 M0R381 172 aa12.51□□□□□ -0.41
VCAN-204ENST00000502527 ID1P41134 155 aa12.51□□□□□ -0.41
VCAN-204ENST00000502527 VAMP3Q15836 100 aa12.51□□□□□ -0.41
VCAN-204ENST00000502527 MYOZ3Q8TDC0 251 aa12.51□□□□□ -0.41
VCAN-204ENST00000502527 PSMB8P28062 276 aa12.5□□□□□ -0.41
VCAN-204ENST00000502527 DEFB112Q30KQ8 113 aa12.5□□□□□ -0.41
VCAN-204ENST00000502527 NRGNQ92686 78 aa12.5□□□□□ -0.41
VCAN-204ENST00000502527 FOXC2Q99958 501 aa12.5□□□□□ -0.41
VCAN-204ENST00000502527 IGHV4-59P01825 116 aa12.5□□□□□ -0.41
VCAN-204ENST00000502527 NMUP48645 174 aa12.5□□□□□ -0.41
VCAN-204ENST00000502527 TCTAP57738 103 aa12.5□□□□□ -0.41
VCAN-204ENST00000502527 DPH3P1Q9H4G8 78 aa12.5□□□□□ -0.41
VCAN-204ENST00000502527 IGKCP01834 107 aa12.49□□□□□ -0.41
VCAN-204ENST00000502527 SPG11Q96JI7 2443 aa12.49□□□□□ -0.41
VCAN-204ENST00000502527 TMEM89A2RUT3 159 aa12.49□□□□□ -0.41
VCAN-204ENST00000502527 A6NJY4 79 aa12.49□□□□□ -0.41
VCAN-204ENST00000502527 J3QLI3 93 aa12.49□□□□□ -0.41
VCAN-204ENST00000502527 SMIM2Q9BVW6 85 aa12.49□□□□□ -0.41
VCAN-204ENST00000502527 CBY3A6NI87 242 aa12.48□□□□□ -0.41
VCAN-204ENST00000502527 DPM2O94777 84 aa12.48□□□□□ -0.41
VCAN-204ENST00000502527 SRD5A1P18405 259 aa12.48□□□□□ -0.41
VCAN-204ENST00000502527 HSD52Q0P140 79 aa12.48□□□□□ -0.41
VCAN-204ENST00000502527 C20orf78Q9BR46 151 aa12.48□□□□□ -0.41
VCAN-204ENST00000502527 HHLA3Q9XRX5 114 aa12.48□□□□□ -0.41
VCAN-204ENST00000502527 CELSR1Q9NYQ6 3014 aa12.48□□□□□ -0.41
VCAN-204ENST00000502527 IGSF10Q6WRI0 2623 aa12.48□□□□□ -0.41
VCAN-204ENST00000502527 FLNCQ14315 2725 aa12.47□□□□□ -0.41
VCAN-204ENST00000502527 PCP2Q8IVA1 136 aa12.47□□□□□ -0.41
VCAN-204ENST00000502527 C14orf178Q8N769 122 aaPredicted RBP12.47□□□□□ -0.41
VCAN-204ENST00000502527 VPS13CQ709C8 3753 aa12.47□□□□□ -0.41
VCAN-204ENST00000502527 GNRH2O43555 120 aa12.47□□□□□ -0.41
VCAN-204ENST00000502527 KIR3DS1Q14943 382 aa12.47□□□□□ -0.41
VCAN-204ENST00000502527 DCANP1Q8TF63 244 aa12.47□□□□□ -0.41
VCAN-204ENST00000502527 USP9XQ93008 2570 aaPredicted RBP12.46□□□□□ -0.41
VCAN-204ENST00000502527 A6NDN8 102 aa12.46□□□□□ -0.41
VCAN-204ENST00000502527 KLLNB2CW77 178 aa12.46□□□□□ -0.41
VCAN-204ENST00000502527 SPRY2O43597 315 aa12.46□□□□□ -0.41
VCAN-204ENST00000502527 RNASE3P12724 160 aaKnown RBP12.46□□□□□ -0.41
VCAN-204ENST00000502527 SUMO2P61956 95 aaKnown RBP12.46□□□□□ -0.41
VCAN-204ENST00000502527 ORMDL2Q53FV1 153 aa12.46□□□□□ -0.41
VCAN-204ENST00000502527 RASL10AQ92737 203 aa12.46□□□□□ -0.41
VCAN-204ENST00000502527 AP1S3Q96PC3 154 aa12.46□□□□□ -0.41
VCAN-204ENST00000502527 SELENOKQ9Y6D0 94 aa12.46□□□□□ -0.41
VCAN-204ENST00000502527 C7orf71A4D174 169 aa12.46□□□□□ -0.42
VCAN-204ENST00000502527 K7EMI3 77 aa12.46□□□□□ -0.42
VCAN-204ENST00000502527 EDN2P20800 178 aa12.46□□□□□ -0.42
VCAN-204ENST00000502527 ADAMTSL5Q6ZMM2 481 aa12.46□□□□□ -0.42
VCAN-204ENST00000502527 OR4C5Q8NGB2 326 aa12.46□□□□□ -0.42
VCAN-204ENST00000502527 A0A096LNT2 108 aa12.45□□□□□ -0.42
VCAN-204ENST00000502527 TMEM238LA0A1B0GVL6 79 aa12.45□□□□□ -0.42
VCAN-204ENST00000502527 PPP1R17O96001 155 aa12.45□□□□□ -0.42
VCAN-204ENST00000502527 TGFAP01135 160 aa12.45□□□□□ -0.42
VCAN-204ENST00000502527 ERASQ7Z444 233 aa12.45□□□□□ -0.42
VCAN-204ENST00000502527 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.44□□□□□ -0.42
VCAN-204ENST00000502527 NXPH4O95158 308 aa12.44□□□□□ -0.42
VCAN-204ENST00000502527 MGPP08493 103 aa12.44□□□□□ -0.42
VCAN-204ENST00000502527 FAM159AQ6UWV7 190 aa12.44□□□□□ -0.42
VCAN-204ENST00000502527 ZFHX3Q15911 3703 aa12.44□□□□□ -0.42
VCAN-204ENST00000502527 A0A087WX48 190 aa12.44□□□□□ -0.42
VCAN-204ENST00000502527 MRPL35Q9NZE8 188 aaKnown RBP12.44□□□□□ -0.42
VCAN-204ENST00000502527 IGKV2D-26A0A0A0MRZ7 120 aa12.43□□□□□ -0.42
VCAN-204ENST00000502527 COX6B1P14854 86 aa12.43□□□□□ -0.42
VCAN-204ENST00000502527 ZC2HC1BQ5TFG8 222 aa12.43□□□□□ -0.42
VCAN-204ENST00000502527 TMEM160Q9NX00 188 aa12.43□□□□□ -0.42
VCAN-204ENST00000502527 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.43□□□□□ -0.424e-13■■■■□ 26.6
VCAN-204ENST00000502527 PLNP26678 52 aa12.42□□□□□ -0.42
VCAN-204ENST00000502527 AMMECR1LQ6DCA0 310 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms