RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 AGRNO00468 2067 aa13.61□□□□□ -0.23
LINC00535-201ENST00000501400 NDUFA7O95182 113 aa13.6□□□□□ -0.23
LINC00535-201ENST00000501400 PAFAH1B2P68402 229 aa13.6□□□□□ -0.23
LINC00535-201ENST00000501400 TMEM61Q8N0U2 210 aa13.6□□□□□ -0.23
LINC00535-201ENST00000501400 RNASE4P34096 147 aaKnown RBP13.6□□□□□ -0.23
LINC00535-201ENST00000501400 TWIST1Q15672 202 aa13.6□□□□□ -0.23
LINC00535-201ENST00000501400 FAM104BQ5XKR9 115 aa13.6□□□□□ -0.23
LINC00535-201ENST00000501400 Q6ZWC4 215 aa13.6□□□□□ -0.23
LINC00535-201ENST00000501400 AMN1Q8IY45 258 aa13.6□□□□□ -0.23
LINC00535-201ENST00000501400 INAFM1C9JVW0 142 aa13.59□□□□□ -0.23
LINC00535-201ENST00000501400 ZNF324O75467 553 aaPredicted RBP13.59□□□□□ -0.23
LINC00535-201ENST00000501400 OR10AG1Q8NH19 301 aa13.59□□□□□ -0.23
LINC00535-201ENST00000501400 NAGKQ9UJ70 344 aa13.59□□□□□ -0.23
LINC00535-201ENST00000501400 TSSC4Q9Y5U2 329 aaPredicted RBP13.59□□□□□ -0.23
LINC00535-201ENST00000501400 CCL24O00175 119 aa13.58□□□□□ -0.23
LINC00535-201ENST00000501400 SNAI2O43623 268 aa13.58□□□□□ -0.23
LINC00535-201ENST00000501400 PROK1P58294 105 aa13.58□□□□□ -0.23
LINC00535-201ENST00000501400 ODF3Q96PU9 254 aa13.58□□□□□ -0.23
LINC00535-201ENST00000501400 SAMD10Q9BYL1 202 aa13.58□□□□□ -0.23
LINC00535-201ENST00000501400 RNF114Q9Y508 228 aa13.58□□□□□ -0.23
LINC00535-201ENST00000501400 FN1P02751 2386 aaKnown RBP13.58□□□□□ -0.24
LINC00535-201ENST00000501400 WNK1Q9H4A3 2382 aa13.58□□□□□ -0.24
LINC00535-201ENST00000501400 OR5AL1P0C617 328 aa13.58□□□□□ -0.24
LINC00535-201ENST00000501400 PMCHP20382 165 aa13.58□□□□□ -0.24
LINC00535-201ENST00000501400 PCP4L1A6NKN8 68 aa13.57□□□□□ -0.24
LINC00535-201ENST00000501400 H3BVH4 76 aa13.57□□□□□ -0.24
LINC00535-201ENST00000501400 AMTP48728 403 aa13.57□□□□□ -0.24
LINC00535-201ENST00000501400 ANXA2RQ3ZCQ2 193 aa13.57□□□□□ -0.24
LINC00535-201ENST00000501400 DMRTA1Q5VZB9 504 aa13.57□□□□□ -0.24
LINC00535-201ENST00000501400 JMJD8Q96S16 334 aa13.57□□□□□ -0.24
LINC00535-201ENST00000501400 TMEM191AQ9H0A3 160 aa13.57□□□□□ -0.24
LINC00535-201ENST00000501400 U3KQK5 164 aa13.57□□□□□ -0.24
LINC00535-201ENST00000501400 TRAV2A0A0B4J234 112 aa13.56□□□□□ -0.24
LINC00535-201ENST00000501400 DEFB114Q30KQ6 69 aa13.56□□□□□ -0.24
LINC00535-201ENST00000501400 MRPL51Q4U2R6 128 aaKnown RBP13.56□□□□□ -0.24
LINC00535-201ENST00000501400 DNLZQ5SXM8 178 aa13.56□□□□□ -0.24
LINC00535-201ENST00000501400 FOXI2Q6ZQN5 318 aa13.56□□□□□ -0.24
LINC00535-201ENST00000501400 FAM19A2Q8N3H0 131 aa13.56□□□□□ -0.24
LINC00535-201ENST00000501400 DYNLRB2Q8TF09 96 aa13.56□□□□□ -0.24
LINC00535-201ENST00000501400 ADARB2-AS1A8MUL3 147 aa13.56□□□□□ -0.24
LINC00535-201ENST00000501400 RNASEKQ6P5S7 137 aaKnown RBP13.56□□□□□ -0.24
LINC00535-201ENST00000501400 NIT1Q86X76 327 aa13.56□□□□□ -0.24
LINC00535-201ENST00000501400 RNF185Q96GF1 192 aa13.56□□□□□ -0.24
LINC00535-201ENST00000501400 D6R8Y8 96 aa13.55□□□□□ -0.24
LINC00535-201ENST00000501400 IGKV3-20P01619 116 aa13.55□□□□□ -0.24
LINC00535-201ENST00000501400 EBLN2Q6P2I7 272 aa13.55□□□□□ -0.24
LINC00535-201ENST00000501400 IGHV4-4A0A075B6R2 117 aa13.54□□□□□ -0.24
LINC00535-201ENST00000501400 CD300EQ496F6 205 aaPredicted RBP13.54□□□□□ -0.24
LINC00535-201ENST00000501400 AMTNQ6UX39 209 aa13.54□□□□□ -0.24
LINC00535-201ENST00000501400 LEPP41159 167 aa13.54□□□□□ -0.24
LINC00535-201ENST00000501400 DEFB131AP59861 70 aa13.54□□□□□ -0.24
LINC00535-201ENST00000501400 C7orf71A4D174 169 aa13.53□□□□□ -0.24
LINC00535-201ENST00000501400 M0R2Z0 102 aa13.53□□□□□ -0.24
LINC00535-201ENST00000501400 HSBP1O75506 76 aa13.53□□□□□ -0.24
LINC00535-201ENST00000501400 KNCNA6PVL3 124 aa13.52□□□□□ -0.24
LINC00535-201ENST00000501400 DUSP14O95147 198 aaKnown RBP13.52□□□□□ -0.24
LINC00535-201ENST00000501400 SCRT2Q9NQ03 307 aa13.52□□□□□ -0.24
LINC00535-201ENST00000501400 GSN-AS1Q9NRJ2 163 aa13.52□□□□□ -0.24
LINC00535-201ENST00000501400 TRAV12-2A0A075B6T6 113 aa13.52□□□□□ -0.25
LINC00535-201ENST00000501400 TRAV12-3A0A0B4J271 114 aa13.52□□□□□ -0.25
LINC00535-201ENST00000501400 A8MTW9 85 aa13.52□□□□□ -0.25
LINC00535-201ENST00000501400 SMKR1H3BMG3 65 aa13.52□□□□□ -0.25
LINC00535-201ENST00000501400 GNRH2O43555 120 aa13.52□□□□□ -0.25
LINC00535-201ENST00000501400 SPRY2O43597 315 aa13.52□□□□□ -0.25
LINC00535-201ENST00000501400 RNASE3P12724 160 aaKnown RBP13.52□□□□□ -0.25
LINC00535-201ENST00000501400 RAB4AP20338 218 aa13.52□□□□□ -0.25
LINC00535-201ENST00000501400 ASIPP42127 132 aa13.52□□□□□ -0.25
LINC00535-201ENST00000501400 KRTAP10-3P60369 221 aa13.52□□□□□ -0.25
LINC00535-201ENST00000501400 ZNF124Q15973 351 aa13.52□□□□□ -0.25
LINC00535-201ENST00000501400 SPINK13Q1W4C9 94 aa13.52□□□□□ -0.25
LINC00535-201ENST00000501400 ORMDL3Q8N138 153 aa13.52□□□□□ -0.25
LINC00535-201ENST00000501400 MAP6D1Q9H9H5 199 aa13.52□□□□□ -0.25
LINC00535-201ENST00000501400 ZNF256Q9Y2P7 627 aaPredicted RBP13.52□□□□□ -0.25
LINC00535-201ENST00000501400 C2CD3Q4AC94 2353 aa13.52□□□□□ -0.25
LINC00535-201ENST00000501400 NIPBLQ6KC79 2804 aaeCLIP13.51□□□□□ -0.25
LINC00535-201ENST00000501400 NCR2O95944 276 aa13.51□□□□□ -0.25
LINC00535-201ENST00000501400 MED14OSP0DP75 135 aa13.51□□□□□ -0.25
LINC00535-201ENST00000501400 FOSL1P15407 271 aa13.51□□□□□ -0.25
LINC00535-201ENST00000501400 EVI2AP22794 236 aa13.51□□□□□ -0.25
LINC00535-201ENST00000501400 CACNG7P62955 275 aa13.51□□□□□ -0.25
LINC00535-201ENST00000501400 CHCHD1Q96BP2 118 aaKnown RBP13.51□□□□□ -0.25
LINC00535-201ENST00000501400 PRELID3AQ96N28 172 aa13.51□□□□□ -0.25
LINC00535-201ENST00000501400 TIMM8BQ9Y5J9 83 aaPredicted RBP13.51□□□□□ -0.25
LINC00535-201ENST00000501400 GAS8-AS1O95177 125 aa13.51□□□□□ -0.25
LINC00535-201ENST00000501400 HLA-DRB4P13762 266 aa13.51□□□□□ -0.25
LINC00535-201ENST00000501400 CDKN1BP46527 198 aa13.51□□□□□ -0.25
LINC00535-201ENST00000501400 SPANXN1Q5VSR9 72 aa13.51□□□□□ -0.25
LINC00535-201ENST00000501400 SPAG8Q99932 426 aaPredicted RBP13.51□□□□□ -0.25
LINC00535-201ENST00000501400 SIGLEC8Q9NYZ4 499 aa13.51□□□□□ -0.25
LINC00535-201ENST00000501400 HLA-DRB4X5D2U9 266 aa13.51□□□□□ -0.25
LINC00535-201ENST00000501400 TCF21O43680 179 aa13.5□□□□□ -0.25
LINC00535-201ENST00000501400 LINC00614P0C842 121 aa13.5□□□□□ -0.25
LINC00535-201ENST00000501400 PMCHL1Q16048 86 aa13.5□□□□□ -0.25
LINC00535-201ENST00000501400 MUC4Q99102 2169 aa13.5□□□□□ -0.25
LINC00535-201ENST00000501400 IGHV1-24A0A0C4DH33 117 aa13.49□□□□□ -0.25
LINC00535-201ENST00000501400 RBMY1BA6NDE4 496 aaKnown RBP13.49□□□□□ -0.25
LINC00535-201ENST00000501400 RBMY1EA6NEQ0 496 aaKnown RBP13.49□□□□□ -0.25
LINC00535-201ENST00000501400 NPYP01303 97 aa13.49□□□□□ -0.25
LINC00535-201ENST00000501400 RBMY1DP0C7P1 496 aaKnown RBP13.49□□□□□ -0.25
LINC00535-201ENST00000501400 S100A4P26447 101 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms