RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 RPL24P83731 157 aaKnown RBP12.59□□□□□ -0.39
COL6A1-206ENST00000498614 RNF182Q8N6D2 247 aa12.59□□□□□ -0.39
COL6A1-206ENST00000498614 ZNF502Q8TBZ5 544 aa12.59□□□□□ -0.39
COL6A1-206ENST00000498614 NHP2Q9NX24 153 aaKnown RBP12.59□□□□□ -0.39
COL6A1-206ENST00000498614 PTPN13Q12923 2485 aa12.59□□□□□ -0.39
COL6A1-206ENST00000498614 IGHV3-66A0A0C4DH42 116 aa12.58□□□□□ -0.4
COL6A1-206ENST00000498614 TEX48A0A1B0GUV7 120 aa12.58□□□□□ -0.4
COL6A1-206ENST00000498614 SMIM17P0DL12 118 aa12.58□□□□□ -0.4
COL6A1-206ENST00000498614 IL17RELQ6ZVW7 336 aa12.58□□□□□ -0.4
COL6A1-206ENST00000498614 IGLV2-18A0A075B6J9 118 aa12.58□□□□□ -0.4
COL6A1-206ENST00000498614 TRGV3P03979 118 aa12.58□□□□□ -0.4
COL6A1-206ENST00000498614 LINC01559Q495D7 138 aa12.58□□□□□ -0.4
COL6A1-206ENST00000498614 PSMG4Q5JS54 123 aa12.58□□□□□ -0.4
COL6A1-206ENST00000498614 Q8N8P6 123 aa12.58□□□□□ -0.4
COL6A1-206ENST00000498614 TMEM160Q9NX00 188 aa12.58□□□□□ -0.4
COL6A1-206ENST00000498614 CEND1Q8N111 149 aa12.57□□□□□ -0.4
COL6A1-206ENST00000498614 MAPKAPK5-AS1Q8N8E1 139 aa12.57□□□□□ -0.4
COL6A1-206ENST00000498614 C11orf21Q9P2W6 132 aa12.57□□□□□ -0.4
COL6A1-206ENST00000498614 IGHV3OR16-13A0A075B7E8 117 aa12.57□□□□□ -0.4
COL6A1-206ENST00000498614 IGHV3-74A0A0B4J1X5 117 aa12.57□□□□□ -0.4
COL6A1-206ENST00000498614 TRAV40A0A0B4J280 105 aa12.57□□□□□ -0.4
COL6A1-206ENST00000498614 ATP5LO75964 103 aa12.57□□□□□ -0.4
COL6A1-206ENST00000498614 COX6B1P14854 86 aa12.57□□□□□ -0.4
COL6A1-206ENST00000498614 CLEC19AQ6UXS0 136 aa12.57□□□□□ -0.4
COL6A1-206ENST00000498614 TM2D2Q9BX73 214 aa12.57□□□□□ -0.4
COL6A1-206ENST00000498614 ZFAND3Q9H8U3 227 aa12.57□□□□□ -0.4
COL6A1-206ENST00000498614 MRPL35Q9NZE8 188 aaKnown RBP12.57□□□□□ -0.4
COL6A1-206ENST00000498614 IGHV3OR16-10A0A075B7F0 116 aa12.56□□□□□ -0.4
COL6A1-206ENST00000498614 IGKV3D-20A0A0C4DH25 116 aa12.56□□□□□ -0.4
COL6A1-206ENST00000498614 NPFFO15130 113 aa12.56□□□□□ -0.4
COL6A1-206ENST00000498614 CCDC140Q96MF4 163 aa12.56□□□□□ -0.4
COL6A1-206ENST00000498614 SMPXQ9UHP9 88 aa12.56□□□□□ -0.4
COL6A1-206ENST00000498614 TRAV26-2A0A0B4J265 109 aa12.55□□□□□ -0.4
COL6A1-206ENST00000498614 CENPVL3A0A0U1RRI6 287 aa12.55□□□□□ -0.4
COL6A1-206ENST00000498614 TMEM219Q86XT9 240 aa12.55□□□□□ -0.4
COL6A1-206ENST00000498614 IGHV3-49A0A0A0MS15 119 aa12.55□□□□□ -0.4
COL6A1-206ENST00000498614 ZNF207O43670 478 aaKnown RBP12.54□□□□□ -0.4
COL6A1-206ENST00000498614 BUB3O43684 328 aa12.54□□□□□ -0.4
COL6A1-206ENST00000498614 NRACQ8N912 160 aa12.54□□□□□ -0.4
COL6A1-206ENST00000498614 GOSR1O95249 250 aa12.54□□□□□ -0.4
COL6A1-206ENST00000498614 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.54□□□□□ -0.4
COL6A1-206ENST00000498614 CLPSL1A2RUU4 121 aa12.53□□□□□ -0.4
COL6A1-206ENST00000498614 E9PLD3 99 aa12.53□□□□□ -0.4
COL6A1-206ENST00000498614 KRTAP10-9P60411 292 aa12.53□□□□□ -0.4
COL6A1-206ENST00000498614 AGPAT4-IT1Q9H0P7 198 aa12.53□□□□□ -0.4
COL6A1-206ENST00000498614 LINC00527Q9UJ94 153 aa12.53□□□□□ -0.4
COL6A1-206ENST00000498614 IGLL5B9A064 214 aa12.52□□□□□ -0.4
COL6A1-206ENST00000498614 HLA-DRB4P13762 266 aa12.52□□□□□ -0.4
COL6A1-206ENST00000498614 Q6ZQT7 251 aa12.52□□□□□ -0.4
COL6A1-206ENST00000498614 C5orf56Q8N8D9 126 aa12.52□□□□□ -0.4
COL6A1-206ENST00000498614 HLA-DRB4X5D2U9 266 aa12.52□□□□□ -0.4
COL6A1-206ENST00000498614 CELSR1Q9NYQ6 3014 aa12.52□□□□□ -0.41
COL6A1-206ENST00000498614 WFDC2Q14508 124 aa12.52□□□□□ -0.41
COL6A1-206ENST00000498614 LAGE3Q14657 143 aa12.52□□□□□ -0.41
COL6A1-206ENST00000498614 MYOZ3Q8TDC0 251 aa12.52□□□□□ -0.41
COL6A1-206ENST00000498614 UFC1Q9Y3C8 167 aa12.52□□□□□ -0.41
COL6A1-206ENST00000498614 APCP25054 2843 aa12.52□□□□□ -0.41
COL6A1-206ENST00000498614 IGHV4-39P01824 125 aa12.51□□□□□ -0.41
COL6A1-206ENST00000498614 EEF1AKMT3Q96AZ1 226 aa12.51□□□□□ -0.41
COL6A1-206ENST00000498614 A0A087WX48 190 aa12.51□□□□□ -0.41
COL6A1-206ENST00000498614 IGHV7-4-1A0A0J9YVY3 117 aa12.51□□□□□ -0.41
COL6A1-206ENST00000498614 RBAKDNA6NC62 111 aa12.51□□□□□ -0.41
COL6A1-206ENST00000498614 SAMD13Q5VXD3 122 aa12.51□□□□□ -0.41
COL6A1-206ENST00000498614 CCL19Q99731 98 aa12.51□□□□□ -0.41
COL6A1-206ENST00000498614 KLK9Q2XQG4 91 aa12.5□□□□□ -0.41
COL6A1-206ENST00000498614 C12orf74Q32Q52 190 aa12.5□□□□□ -0.41
COL6A1-206ENST00000498614 BRD3OSQ6XYD6 125 aa12.5□□□□□ -0.41
COL6A1-206ENST00000498614 FOXI2Q6ZQN5 318 aa12.5□□□□□ -0.41
COL6A1-206ENST00000498614 KLK9Q9UKQ9 250 aa12.5□□□□□ -0.41
COL6A1-206ENST00000498614 ABCA2Q9BZC7 2435 aa12.5□□□□□ -0.41
COL6A1-206ENST00000498614 RAB9AP51151 201 aa12.5□□□□□ -0.41
COL6A1-206ENST00000498614 ZNF479Q96JC4 524 aa12.5□□□□□ -0.41
COL6A1-206ENST00000498614 SPANXB1Q9NS25 103 aaPredicted RBP12.5□□□□□ -0.41
COL6A1-206ENST00000498614 GTSF1LQ9H1H1 148 aa12.49□□□□□ -0.41
COL6A1-206ENST00000498614 HECTD1Q9ULT8 2610 aa12.49□□□□□ -0.41
COL6A1-206ENST00000498614 TRAV8-2A0A0B4J237 113 aa12.49□□□□□ -0.41
COL6A1-206ENST00000498614 PRSS47A8MTI9 375 aa12.49□□□□□ -0.41
COL6A1-206ENST00000498614 H3BMG7 143 aa12.49□□□□□ -0.41
COL6A1-206ENST00000498614 AZU1P20160 251 aa12.48□□□□□ -0.41
COL6A1-206ENST00000498614 METTL26Q96S19 204 aa12.48□□□□□ -0.41
COL6A1-206ENST00000498614 HIST1H4GQ99525 98 aa12.48□□□□□ -0.41
COL6A1-206ENST00000498614 SLC50A1Q9BRV3 221 aa12.48□□□□□ -0.41
COL6A1-206ENST00000498614 TRBV7-1A0A0A6YYK4 115 aa12.48□□□□□ -0.41
COL6A1-206ENST00000498614 ATP5G2Q06055 141 aa12.48□□□□□ -0.41
COL6A1-206ENST00000498614 TAL2Q16559 108 aa12.48□□□□□ -0.41
COL6A1-206ENST00000498614 AMTNQ6UX39 209 aa12.48□□□□□ -0.41
COL6A1-206ENST00000498614 TSSC4Q9Y5U2 329 aaPredicted RBP12.48□□□□□ -0.41
COL6A1-206ENST00000498614 ANKRD17O75179 2603 aaKnown RBP12.47□□□□□ -0.41
COL6A1-206ENST00000498614 F8W1H4 67 aa12.47□□□□□ -0.41
COL6A1-206ENST00000498614 TMEM78Q5T7P6 136 aa12.47□□□□□ -0.41
COL6A1-206ENST00000498614 SH2D6Q7Z4S9 175 aa12.47□□□□□ -0.41
COL6A1-206ENST00000498614 MOB4Q9Y3A3 225 aa12.47□□□□□ -0.41
COL6A1-206ENST00000498614 TRAV41A0A0B4J266 112 aa12.47□□□□□ -0.41
COL6A1-206ENST00000498614 PLNP26678 52 aa12.47□□□□□ -0.41
COL6A1-206ENST00000498614 SPANXN1Q5VSR9 72 aa12.47□□□□□ -0.41
COL6A1-206ENST00000498614 MTURNQ8N3F0 131 aa12.47□□□□□ -0.41
COL6A1-206ENST00000498614 ZNF469Q96JG9 3925 aaPredicted RBP12.47□□□□□ -0.41
COL6A1-206ENST00000498614 C8orf86Q6ZUL3 223 aa12.46□□□□□ -0.41
COL6A1-206ENST00000498614 TRBV7-3A0A075B6L6 115 aa12.45□□□□□ -0.42
COL6A1-206ENST00000498614 IGHV4-61A0A0C4DH41 118 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms