RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 TMEM263Q8WUH6 116 aaKnown RBP12.89□□□□□ -0.35
PRKCB-209ENST00000498058 LINC00477Q96M19 166 aa12.89□□□□□ -0.35
PRKCB-209ENST00000498058 KRTAP1-5Q9BYS1 174 aa12.89□□□□□ -0.35
PRKCB-209ENST00000498058 APOBP04114 4563 aaKnown RBP12.88□□□□□ -0.35
PRKCB-209ENST00000498058 IGKV2-40A0A087WW87 121 aaPredicted RBP12.88□□□□□ -0.35
PRKCB-209ENST00000498058 IGKV2D-40P01614 121 aaPredicted RBP12.88□□□□□ -0.35
PRKCB-209ENST00000498058 S100A9P06702 114 aaKnown RBP12.88□□□□□ -0.35
PRKCB-209ENST00000498058 PEA15Q15121 130 aa12.88□□□□□ -0.35
PRKCB-209ENST00000498058 C9orf47Q6ZRZ4 202 aa12.88□□□□□ -0.35
PRKCB-209ENST00000498058 SMDT1Q9H4I9 107 aa12.88□□□□□ -0.35
PRKCB-209ENST00000498058 C16orf90A8MZG2 172 aa12.87□□□□□ -0.35
PRKCB-209ENST00000498058 H7BYZ3 331 aa12.87□□□□□ -0.35
PRKCB-209ENST00000498058 HOXA5P20719 270 aa12.87□□□□□ -0.35
PRKCB-209ENST00000498058 AKR1C3P42330 323 aa12.87□□□□□ -0.35
PRKCB-209ENST00000498058 CCL18P55774 89 aa12.87□□□□□ -0.35
PRKCB-209ENST00000498058 UBE2G1P62253 170 aa12.87□□□□□ -0.35
PRKCB-209ENST00000498058 ZNF493Q6ZR52 646 aa12.87□□□□□ -0.35
PRKCB-209ENST00000498058 TMEM75Q8N9X5 138 aa12.87□□□□□ -0.35
PRKCB-209ENST00000498058 RAB19A4D1S5 217 aa12.86□□□□□ -0.35
PRKCB-209ENST00000498058 TMEM250H0YL14 139 aa12.86□□□□□ -0.35
PRKCB-209ENST00000498058 J3KRW8 73 aa12.86□□□□□ -0.35
PRKCB-209ENST00000498058 CT45A10P0DMU9 189 aa12.86□□□□□ -0.35
PRKCB-209ENST00000498058 ZNF138P52744 262 aa12.86□□□□□ -0.35
PRKCB-209ENST00000498058 C11orf52Q96A22 123 aa12.86□□□□□ -0.35
PRKCB-209ENST00000498058 FMC1Q96HJ9 113 aa12.86□□□□□ -0.35
PRKCB-209ENST00000498058 ODF3Q96PU9 254 aa12.86□□□□□ -0.35
PRKCB-209ENST00000498058 NDFIP1Q9BT67 221 aa12.86□□□□□ -0.35
PRKCB-209ENST00000498058 TRAV26-1A0A087WT03 109 aa12.85□□□□□ -0.35
PRKCB-209ENST00000498058 SCO2A0A1W2PP80 73 aa12.85□□□□□ -0.35
PRKCB-209ENST00000498058 LEPP41159 167 aa12.85□□□□□ -0.35
PRKCB-209ENST00000498058 OR5I1Q13606 314 aa12.85□□□□□ -0.35
PRKCB-209ENST00000498058 VGLL1Q99990 258 aa12.85□□□□□ -0.35
PRKCB-209ENST00000498058 C20orf144Q9BQM9 153 aa12.85□□□□□ -0.35
PRKCB-209ENST00000498058 AGPAT4-IT1Q9H0P7 198 aa12.85□□□□□ -0.35
PRKCB-209ENST00000498058 MED9Q9NWA0 146 aa12.85□□□□□ -0.35
PRKCB-209ENST00000498058 LENEPQ9Y5L5 61 aa12.85□□□□□ -0.35
PRKCB-209ENST00000498058 TRBV7-9A0A0J9YWB2 115 aa12.84□□□□□ -0.35
PRKCB-209ENST00000498058 A0A0J9YY99 117 aa12.84□□□□□ -0.35
PRKCB-209ENST00000498058 GAGE12BA1L429 117 aa12.84□□□□□ -0.35
PRKCB-209ENST00000498058 GAGE7O76087 117 aa12.84□□□□□ -0.35
PRKCB-209ENST00000498058 GAGE12FP0CL80 117 aa12.84□□□□□ -0.35
PRKCB-209ENST00000498058 GAGE12GP0CL81 117 aa12.84□□□□□ -0.35
PRKCB-209ENST00000498058 GAGE12IP0CL82 117 aa12.84□□□□□ -0.35
PRKCB-209ENST00000498058 FLI1Q01543 452 aaPredicted RBP12.84□□□□□ -0.35
PRKCB-209ENST00000498058 ERCC8Q13216 396 aa12.84□□□□□ -0.35
PRKCB-209ENST00000498058 Q9H8V8 135 aa12.84□□□□□ -0.35
PRKCB-209ENST00000498058 ZNF492Q9P255 531 aa12.84□□□□□ -0.35
PRKCB-209ENST00000498058 KLF12Q9Y4X4 402 aa12.84□□□□□ -0.35
PRKCB-209ENST00000498058 TMEM183BQ1AE95 376 aa12.83□□□□□ -0.36
PRKCB-209ENST00000498058 ESRGQ1W209 222 aa12.83□□□□□ -0.36
PRKCB-209ENST00000498058 SAPCD1Q5SSQ6 148 aa12.83□□□□□ -0.36
PRKCB-209ENST00000498058 PSG8Q9UQ74 426 aa12.83□□□□□ -0.36
PRKCB-209ENST00000498058 DNAH5Q8TE73 4624 aa12.83□□□□□ -0.36
PRKCB-209ENST00000498058 TRAV12-3A0A0B4J271 114 aa12.82□□□□□ -0.36
PRKCB-209ENST00000498058 TRBV6-1A0A0K0K1D8 114 aa12.82□□□□□ -0.36
PRKCB-209ENST00000498058 PRNTQ86SH4 94 aa12.82□□□□□ -0.36
PRKCB-209ENST00000498058 TREM1Q9NP99 234 aa12.82□□□□□ -0.36
PRKCB-209ENST00000498058 ZFP30Q9Y2G7 519 aa12.82□□□□□ -0.36
PRKCB-209ENST00000498058 TRAV8-1A0A0A6YYK1 113 aa12.81□□□□□ -0.36
PRKCB-209ENST00000498058 TRAV34A0A0B4J273 112 aa12.81□□□□□ -0.36
PRKCB-209ENST00000498058 LINC00862A6NCI5 91 aa12.81□□□□□ -0.36
PRKCB-209ENST00000498058 CDK2AP2O75956 126 aa12.81□□□□□ -0.36
PRKCB-209ENST00000498058 RPL35P42766 123 aaKnown RBP12.81□□□□□ -0.36
PRKCB-209ENST00000498058 UQCC3Q6UW78 93 aa12.81□□□□□ -0.36
PRKCB-209ENST00000498058 Q6ZTI0 123 aa12.81□□□□□ -0.36
PRKCB-209ENST00000498058 IGLV2-11P01706 119 aa12.8□□□□□ -0.36
PRKCB-209ENST00000498058 CEBPGP53567 150 aa12.8□□□□□ -0.36
PRKCB-209ENST00000498058 Q86TA4 180 aa12.8□□□□□ -0.36
PRKCB-209ENST00000498058 COMMD7Q86VX2 200 aa12.8□□□□□ -0.36
PRKCB-209ENST00000498058 Q8TAT8 98 aa12.8□□□□□ -0.36
PRKCB-209ENST00000498058 LINC00479Q96M42 142 aa12.8□□□□□ -0.36
PRKCB-209ENST00000498058 GPX1P07203 203 aa12.79□□□□□ -0.36
PRKCB-209ENST00000498058 SRP19P09132 144 aaKnown RBP12.79□□□□□ -0.36
PRKCB-209ENST00000498058 CRISP2P16562 243 aa12.79□□□□□ -0.36
PRKCB-209ENST00000498058 SPATA12Q7Z6I5 190 aa12.79□□□□□ -0.36
PRKCB-209ENST00000498058 C11orf72Q8NBR9 251 aa12.79□□□□□ -0.36
PRKCB-209ENST00000498058 VSIG2Q96IQ7 327 aa12.79□□□□□ -0.36
PRKCB-209ENST00000498058 FAM19A4Q96LR4 140 aa12.79□□□□□ -0.36
PRKCB-209ENST00000498058 SGK494Q96LW2 274 aa12.79□□□□□ -0.36
PRKCB-209ENST00000498058 UPK3BQ9BT76 320 aa12.79□□□□□ -0.36
PRKCB-209ENST00000498058 SNURFLB1AK76 121 aa12.78□□□□□ -0.36
PRKCB-209ENST00000498058 LTAP01374 205 aa12.78□□□□□ -0.36
PRKCB-209ENST00000498058 GNG4P50150 75 aa12.78□□□□□ -0.36
PRKCB-209ENST00000498058 KRTAP10-2P60368 255 aa12.78□□□□□ -0.36
PRKCB-209ENST00000498058 ZNF674Q2M3X9 581 aa12.78□□□□□ -0.36
PRKCB-209ENST00000498058 FAM74A3Q4VXF1 159 aa12.78□□□□□ -0.36
PRKCB-209ENST00000498058 BAGE2Q86Y30 109 aa12.78□□□□□ -0.36
PRKCB-209ENST00000498058 MAPKAPK5-AS1Q8N8E1 139 aa12.78□□□□□ -0.36
PRKCB-209ENST00000498058 SRSF3P84103 164 aaKnown RBP12.77□□□□□ -0.37
PRKCB-209ENST00000498058 DAZ2Q13117 558 aaKnown RBP12.77□□□□□ -0.37
PRKCB-209ENST00000498058 SMUG1Q53HV7 270 aa12.77□□□□□ -0.37
PRKCB-209ENST00000498058 Q6ZQT7 251 aa12.77□□□□□ -0.37
PRKCB-209ENST00000498058 EIF4E3Q8N5X7 224 aaKnown RBP12.77□□□□□ -0.37
PRKCB-209ENST00000498058 SMIM12Q96EX1 92 aa12.77□□□□□ -0.37
PRKCB-209ENST00000498058 PYGO2Q9BRQ0 406 aa12.77□□□□□ -0.37
PRKCB-209ENST00000498058 DERL1Q9BUN8 251 aa12.77□□□□□ -0.37
PRKCB-209ENST00000498058 PARLQ9H300 379 aa12.77□□□□□ -0.37
PRKCB-209ENST00000498058 GSN-AS1Q9NRJ2 163 aa12.77□□□□□ -0.37
PRKCB-209ENST00000498058 MRPS16Q9Y3D3 137 aaKnown RBP12.77□□□□□ -0.37
PRKCB-209ENST00000498058 A0A096LPF7 62 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms