RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 C21orf62-AS1Q17RA5 79 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 NIT1Q86X76 327 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 NUP35Q8NFH5 326 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 RPL36ALQ969Q0 106 aaKnown RBP6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 ZNF492Q9P255 531 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 TSSC4Q9Y5U2 329 aaPredicted RBP6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 ADARB2-AS1A8MUL3 147 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 C16orf54Q6UWD8 224 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 OR9G4Q8NGQ1 327 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 FLNCQ14315 2725 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 SMIM27A0A1W2PRY6 76 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 H3BRN7 92 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 K7EIM0 57 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 DEFB130BP0DP73 79 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 DEFB130AP0DP74 79 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 PAX2Q02962 417 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 CT83Q5H943 113 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 MORN3Q6PF18 240 aaPredicted RBP6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 TRBV19A0A075B6N1 114 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 CCL24O00175 119 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 CRLF1O75462 422 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 IGKV1-17P01599 117 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 HOXB4P17483 251 aaPredicted RBP6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 ZNF415Q09FC8 603 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 LAMTOR2Q9Y2Q5 125 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 TRAV9-2A0A087WT02 112 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 LY6LH3BQJ8 138 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 NDUFB8O95169 186 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 GZMBP10144 247 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 C11orf71Q6IPW1 123 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 ZNF491Q8N8L2 437 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 CHCHD1Q96BP2 118 aaKnown RBP6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 LINC00477Q96M19 166 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 Q86TA4 180 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 LINC00469Q8N7U9 141 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 IGF2BP2-AS1Q96M15 143 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 RCHY1Q96PM5 261 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 NHP2Q9NX24 153 aaKnown RBP6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 SMPXQ9UHP9 88 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 TRAV8-1A0A0A6YYK1 113 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 FAM231BA6NCW3 169 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 FCN3O75636 299 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 GP9P14770 177 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 SEC11AP67812 179 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 HIST2H2BDQ6DRA6 164 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 SMAD5-AS1Q9Y6J3 95 aa6.28□□□□□ -1.4
HLA-DMB-262ENST00000498020 A0A1B0GV90 55 aa6.27□□□□□ -1.41
HLA-DMB-262ENST00000498020 ZNF815PA8K554 130 aa6.27□□□□□ -1.41
HLA-DMB-262ENST00000498020 ODF3BA8MYP8 253 aa6.27□□□□□ -1.41
HLA-DMB-262ENST00000498020 PRB4P10163 310 aaPredicted RBP6.27□□□□□ -1.41
HLA-DMB-262ENST00000498020 ZNF876PQ49A33 203 aa6.27□□□□□ -1.41
HLA-DMB-262ENST00000498020 MRPL27Q9P0M9 148 aaKnown RBP6.27□□□□□ -1.41
HLA-DMB-262ENST00000498020 IGKV2-40A0A087WW87 121 aaPredicted RBP6.27□□□□□ -1.41
HLA-DMB-262ENST00000498020 IGKV2D-40P01614 121 aaPredicted RBP6.27□□□□□ -1.41
HLA-DMB-262ENST00000498020 CITED2Q99967 270 aaPredicted RBP6.27□□□□□ -1.41
HLA-DMB-262ENST00000498020 GFRA4Q9GZZ7 299 aa6.27□□□□□ -1.41
HLA-DMB-262ENST00000498020 CHTOPQ9Y3Y2 248 aaKnown RBP6.27□□□□□ -1.41
HLA-DMB-262ENST00000498020 EVI2AP22794 236 aa6.27□□□□□ -1.41
HLA-DMB-262ENST00000498020 PSG3Q16557 428 aa6.27□□□□□ -1.41
HLA-DMB-262ENST00000498020 IGLV11-55A0A075B6I3 123 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 NDPQ00604 133 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 LCN12Q6JVE5 192 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 CFHR4Q92496 578 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 MYO15AQ9UKN7 3530 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 TRGV1A0A0A0MS02 117 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 IGKCP01834 107 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 FXYD7P58549 80 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 TMEM75Q8N9X5 138 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 KLF12Q9Y4X4 402 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 TRAV2A0A0B4J234 112 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 CENPVL3A0A0U1RRI6 287 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 LINC01619G3V211 115 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 H3BUT2 72 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 CKS1BP61024 79 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 JPT2Q9H910 190 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 USP34Q70CQ2 3546 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 FAM223BA6NKX1 122 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 ATP6V0E1O15342 81 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 LINC00158P58513 81 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 CD300EQ496F6 205 aaPredicted RBP6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 FAM223AQ8IWN6 122 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 NDUFAF3Q9BU61 184 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 RHPN1-AS1Q9BWJ2 59 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 SIRPDQ9H106 197 aa6.26□□□□□ -1.41
HLA-DMB-262ENST00000498020 A0A0U1RRA0 63 aa6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 LTAP01374 205 aa6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 LAGE3Q14657 143 aa6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 DAZ1Q9NQZ3 744 aaKnown RBP6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 TMEM238C9JI98 176 aa6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 VCYO14598 125 aa6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 S100A7L2Q5SY68 101 aa6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 PRR25Q96S07 402 aa6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 IGHV7-81A0A0B4J1V7 117 aa6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 TRAV12-3A0A0B4J271 114 aa6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 INSP01308 110 aa6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 IGLV2-8P01709 118 aa6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 OR5A1Q8NGJ0 315 aa6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 WIPF2Q8TF74 440 aaPredicted RBP6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 PLXNB1O43157 2135 aa6.25□□□□□ -1.41
HLA-DMB-262ENST00000498020 SFTA2Q6UW10 78 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms