RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 XCL1P47992 114 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 BRWD1-AS2P59051 145 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 RPS21P63220 83 aaKnown RBP2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 KIAA0087Q14695 138 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 ATXN8Q156A1 80 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 LINC01554Q52M75 96 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 LYPD5Q6UWN5 251 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 IGFL3Q6UXB1 125 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 FAM223AQ8IWN6 122 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 SLC25A29Q8N8R3 303 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 TAS2R4Q9NYW5 299 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 SPRR3Q9UBC9 169 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 XCL2Q9UBD3 114 aa2.28□□□□□ -2.04
SNRNP48-202ENST00000496946 ARHGAP21Q5T5U3 1957 aa2.28□□□□□ -2.05
SNRNP48-202ENST00000496946 OBSL1O75147 1896 aa2.28□□□□□ -2.05
SNRNP48-202ENST00000496946 TRPM6Q9BX84 2022 aa2.28□□□□□ -2.05
SNRNP48-202ENST00000496946 IGLV3-10A0A075B6K4 115 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 TRBV7-3A0A075B6L6 115 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 IGKV2D-30A0A075B6S6 120 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 IGHV6-1A0A0B4J1U7 121 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 TRAV3A0A0B4J244 114 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 IGHV1-69DA0A0B4J2H0 117 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 TEX49A0A1B0GTD5 131 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 IQCF6A8MYZ5 107 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 C9JCJ5 164 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 C11orf94C9JXX5 98 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 BCE1O60756 84 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 FBXL19-AS1Q494R0 122 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 CLLU1OSQ5K130 101 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 MPLKIPQ8TAP9 179 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 URB1-AS1Q96HZ7 61 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 OSTCQ9NRP0 149 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 DOT1LQ8TEK3 1739 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 PTPRDP23468 1912 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 ANAPC1Q9H1A4 1944 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 TRAV13-2A0A0B4J235 113 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 PIN1P1O15428 100 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 WISP3O95389 354 aaPredicted RBP2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 IGLV3-27P01718 113 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 UBE2D1P51668 147 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 CRYBA2P53672 197 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 GNB1P62873 340 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 TWIST1Q15672 202 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 ATP11AUNQ6ZP68 121 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 TIMM9Q9Y5J7 89 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 V9GYV3 84 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 SCN7AQ01118 1682 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 LMO7Q8WWI1 1683 aa2.27□□□□□ -2.05
SNRNP48-202ENST00000496946 LRRC37A3O60309 1634 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 SMIM27A0A1W2PRY6 76 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 PIRTP0C851 137 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 FCER1GP30273 86 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 RNASE4P34096 147 aaKnown RBP2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 KRTAP10-9P60411 292 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 LMO4P61968 165 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 RPL38P63173 70 aaKnown RBP2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 KISS1Q15726 138 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 Q1T7F1 81 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 ESRGQ1W209 222 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 C1orf100Q5SVJ3 147 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 C2orf82Q6UX34 121 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 NOTCH2NLQ7Z3S9 236 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 CHCHD10Q8WYQ3 142 aaPredicted RBP2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 C11orf52Q96A22 123 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 ZNF414Q96IQ9 312 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 C11orf1Q9H5F2 150 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 ZNF71Q9NQZ8 489 aaPredicted RBP2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 MRPL35Q9NZE8 188 aaKnown RBP2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 IGHV4-28A0A0C4DH34 117 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 IGKV1-8A0A0C4DH67 115 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 C17orf51A8MQB3 221 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 PRM2P04554 102 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 FRMD6-AS1P0C7T7 363 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 ZNF22P17026 224 aaPredicted RBP2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 NPPCP23582 126 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 IFI27P40305 119 aaPredicted RBP2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 KLKP1Q107X0 134 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 NDUFA11Q86Y39 141 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 ITLN1Q8WWA0 313 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 ITLN2Q8WWU7 325 aaPredicted RBP2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 ZNF524Q96C55 264 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 PROK2Q9HC23 129 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 EML6Q6ZMW3 1958 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 SHROOM3Q8TF72 1996 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 SIP14410 1827 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 RALGAPA2Q2PPJ7 1873 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 MYO9BQ13459 2157 aa2.26□□□□□ -2.05
SNRNP48-202ENST00000496946 IGKV1D-17A0A075B6S4 117 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 IGKV1-27A0A075B6S5 117 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 IGHV3OR16-13A0A075B7E8 117 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 FAM223BA6NKX1 122 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 A6NN06 94 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 E7EQL1 145 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 IGHV4-30-4P0DP06 118 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 SLC48A1Q6P1K1 146 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 C20orf197Q8N268 126 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 RPRMLQ8N4K4 120 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 CLEC2BQ92478 149 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 DOCK11Q5JSL3 2073 aa2.25□□□□□ -2.05
SNRNP48-202ENST00000496946 FGF12P61328 243 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms