RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 RPL19P84098 196 aaKnown RBP13.24□□□□□ -0.29
RGP1-202ENST00000496906 OSTCQ9NRP0 149 aa13.24□□□□□ -0.29
RGP1-202ENST00000496906 MEGF8Q7Z7M0 2845 aa13.23□□□□□ -0.29
RGP1-202ENST00000496906 TP53TG1Q9Y2A0 90 aa13.23□□□□□ -0.29
RGP1-202ENST00000496906 B4DEV8 164 aa13.22□□□□□ -0.29
RGP1-202ENST00000496906 SPRY2O43597 315 aa13.22□□□□□ -0.29
RGP1-202ENST00000496906 PRM2P04554 102 aa13.22□□□□□ -0.29
RGP1-202ENST00000496906 ZNF575Q86XF7 245 aa13.22□□□□□ -0.29
RGP1-202ENST00000496906 KCNS1Q96KK3 526 aa13.22□□□□□ -0.29
RGP1-202ENST00000496906 OVOL2Q9BRP0 275 aa13.22□□□□□ -0.29
RGP1-202ENST00000496906 X6R8D5 127 aa13.22□□□□□ -0.29
RGP1-202ENST00000496906 TMEM189A5PLL7 270 aa13.21□□□□□ -0.29
RGP1-202ENST00000496906 ZNF705GA8MUZ8 300 aaPredicted RBP13.21□□□□□ -0.29
RGP1-202ENST00000496906 GATCO43716 136 aaKnown RBP13.21□□□□□ -0.29
RGP1-202ENST00000496906 HTN1P15515 57 aa13.21□□□□□ -0.29
RGP1-202ENST00000496906 SVBPQ8N300 66 aa13.21□□□□□ -0.29
RGP1-202ENST00000496906 C15orf54Q8N8G6 183 aa13.21□□□□□ -0.29
RGP1-202ENST00000496906 OR2D3Q8NGH3 330 aa13.21□□□□□ -0.29
RGP1-202ENST00000496906 OR10G8Q8NGN5 311 aa13.21□□□□□ -0.29
RGP1-202ENST00000496906 NEU1Q99519 415 aa13.21□□□□□ -0.29
RGP1-202ENST00000496906 B9D2Q9BPU9 175 aa13.21□□□□□ -0.29
RGP1-202ENST00000496906 TM2D3Q9BRN9 247 aa13.21□□□□□ -0.29
RGP1-202ENST00000496906 RPP21Q9H633 154 aaKnown RBP13.21□□□□□ -0.29
RGP1-202ENST00000496906 RETNQ9HD89 108 aa13.21□□□□□ -0.29
RGP1-202ENST00000496906 TP53TG3Q9ULZ0 132 aa13.21□□□□□ -0.29
RGP1-202ENST00000496906 TMSB15BA0A087X1C1 80 aa13.2□□□□□ -0.3
RGP1-202ENST00000496906 CBY3A6NI87 242 aa13.2□□□□□ -0.3
RGP1-202ENST00000496906 TYMSP04818 313 aa13.2□□□□□ -0.3
RGP1-202ENST00000496906 RNF212Q495C1 297 aa13.2□□□□□ -0.3
RGP1-202ENST00000496906 CLRN3Q8NCR9 226 aa13.2□□□□□ -0.3
RGP1-202ENST00000496906 OR11H2Q8NH07 326 aa13.2□□□□□ -0.3
RGP1-202ENST00000496906 V9GYV3 84 aa13.2□□□□□ -0.3
RGP1-202ENST00000496906 PRKDCP78527 4128 aaKnown RBP13.2□□□□□ -0.3
RGP1-202ENST00000496906 GNRH2O43555 120 aa13.2□□□□□ -0.3
RGP1-202ENST00000496906 CT83Q5H943 113 aa13.2□□□□□ -0.3
RGP1-202ENST00000496906 DNAH9Q9NYC9 4486 aa13.19□□□□□ -0.3
RGP1-202ENST00000496906 NBEAL2Q6ZNJ1 2754 aa13.19□□□□□ -0.3
RGP1-202ENST00000496906 ATP6V1G1O75348 118 aa13.19□□□□□ -0.3
RGP1-202ENST00000496906 AZU1P20160 251 aa13.19□□□□□ -0.3
RGP1-202ENST00000496906 RRN3P1Q2M238 152 aa13.19□□□□□ -0.3
RGP1-202ENST00000496906 SPATA25Q9BR10 227 aa13.19□□□□□ -0.3
RGP1-202ENST00000496906 TRGV11A0A075B6L2 103 aa13.18□□□□□ -0.3
RGP1-202ENST00000496906 GRIFINA4D1Z8 144 aa13.18□□□□□ -0.3
RGP1-202ENST00000496906 SMIM9A6NGZ8 99 aa13.18□□□□□ -0.3
RGP1-202ENST00000496906 SNAPINO95295 136 aa13.18□□□□□ -0.3
RGP1-202ENST00000496906 MT-ND4LP03901 98 aa13.18□□□□□ -0.3
RGP1-202ENST00000496906 CXCL1P09341 107 aa13.18□□□□□ -0.3
RGP1-202ENST00000496906 RPS20P60866 119 aaKnown RBP13.18□□□□□ -0.3
RGP1-202ENST00000496906 RHEBQ15382 184 aa13.18□□□□□ -0.3
RGP1-202ENST00000496906 RNASE8Q8TDE3 154 aaKnown RBP13.18□□□□□ -0.3
RGP1-202ENST00000496906 ANAPC16Q96DE5 110 aa13.18□□□□□ -0.3
RGP1-202ENST00000496906 HUWE1Q7Z6Z7 4374 aaKnown RBP13.17□□□□□ -0.3
RGP1-202ENST00000496906 IGHV3-16A0A0C4DH30 117 aa13.17□□□□□ -0.3
RGP1-202ENST00000496906 PPP1R2P9O14990 202 aa13.17□□□□□ -0.3
RGP1-202ENST00000496906 GZMBP10144 247 aa13.17□□□□□ -0.3
RGP1-202ENST00000496906 DNLZQ5SXM8 178 aa13.17□□□□□ -0.3
RGP1-202ENST00000496906 TMEM263Q8WUH6 116 aaKnown RBP13.17□□□□□ -0.3
RGP1-202ENST00000496906 XKRY2A2RUG3 117 aa13.16□□□□□ -0.3
RGP1-202ENST00000496906 C7orf77A4D0Y5 90 aa13.16□□□□□ -0.3
RGP1-202ENST00000496906 ASIPP42127 132 aa13.16□□□□□ -0.3
RGP1-202ENST00000496906 C11orf72Q8NBR9 251 aa13.16□□□□□ -0.3
RGP1-202ENST00000496906 MDFICQ9P1T7 246 aa13.16□□□□□ -0.3
RGP1-202ENST00000496906 A8MWL6 223 aa13.15□□□□□ -0.3
RGP1-202ENST00000496906 MIFP14174 115 aa13.15□□□□□ -0.3
RGP1-202ENST00000496906 ZNF493Q6ZR52 646 aa13.15□□□□□ -0.3
RGP1-202ENST00000496906 Q8NAQ8 132 aa13.15□□□□□ -0.3
RGP1-202ENST00000496906 C16orf74Q96GX8 76 aa13.15□□□□□ -0.3
RGP1-202ENST00000496906 PLAC8L1A1L4L8 177 aa13.15□□□□□ -0.3
RGP1-202ENST00000496906 RNASE3P12724 160 aaKnown RBP13.15□□□□□ -0.3
RGP1-202ENST00000496906 TSKUQ8WUA8 353 aa13.15□□□□□ -0.3
RGP1-202ENST00000496906 A0A087WWC5 75 aa13.14□□□□□ -0.31
RGP1-202ENST00000496906 IGHV4-28A0A0C4DH34 117 aa13.14□□□□□ -0.31
RGP1-202ENST00000496906 IGLC6P0CF74 106 aa13.14□□□□□ -0.31
RGP1-202ENST00000496906 S100A4P26447 101 aaKnown RBP13.14□□□□□ -0.31
RGP1-202ENST00000496906 ZNF415Q09FC8 603 aa13.14□□□□□ -0.31
RGP1-202ENST00000496906 IL17DQ8TAD2 202 aa13.14□□□□□ -0.31
RGP1-202ENST00000496906 GTSF1Q8WW33 167 aa13.14□□□□□ -0.31
RGP1-202ENST00000496906 CTDSP1Q9GZU7 261 aa13.14□□□□□ -0.31
RGP1-202ENST00000496906 RPS10P5Q9NQ39 176 aa13.14□□□□□ -0.31
RGP1-202ENST00000496906 GSN-AS1Q9NRJ2 163 aa13.14□□□□□ -0.31
RGP1-202ENST00000496906 IL36BQ9NZH7 164 aa13.14□□□□□ -0.31
RGP1-202ENST00000496906 H3BVH4 76 aa13.13□□□□□ -0.31
RGP1-202ENST00000496906 TCL1AP56279 114 aa13.13□□□□□ -0.31
RGP1-202ENST00000496906 ATRAIDQ6UW56 229 aa13.13□□□□□ -0.31
RGP1-202ENST00000496906 C9orf85Q96MD7 179 aa13.13□□□□□ -0.31
RGP1-202ENST00000496906 GFRA4Q9GZZ7 299 aa13.13□□□□□ -0.31
RGP1-202ENST00000496906 ZMAT4Q9H898 229 aa13.13□□□□□ -0.31
RGP1-202ENST00000496906 FAM231BA6NCW3 169 aa13.12□□□□□ -0.31
RGP1-202ENST00000496906 ARMS2P0C7Q2 107 aa13.12□□□□□ -0.31
RGP1-202ENST00000496906 MED14OSP0DP75 135 aa13.12□□□□□ -0.31
RGP1-202ENST00000496906 S100A1P23297 94 aa13.12□□□□□ -0.31
RGP1-202ENST00000496906 FER1L6-AS1Q8NA97 138 aa13.12□□□□□ -0.31
RGP1-202ENST00000496906 SCRT2Q9NQ03 307 aa13.12□□□□□ -0.31
RGP1-202ENST00000496906 TMEM242Q9NWH2 141 aa13.12□□□□□ -0.31
RGP1-202ENST00000496906 A0A1W2PPQ1 181 aa13.11□□□□□ -0.31
RGP1-202ENST00000496906 SMIM27A0A1W2PRY6 76 aa13.11□□□□□ -0.31
RGP1-202ENST00000496906 SNAI2O43623 268 aa13.11□□□□□ -0.31
RGP1-202ENST00000496906 FOXA3P55318 350 aaPredicted RBP13.11□□□□□ -0.31
RGP1-202ENST00000496906 SSBP4Q9BWG4 385 aaPredicted RBP13.11□□□□□ -0.31
RGP1-202ENST00000496906 TENM3Q9P273 2699 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms