RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 PLA2G2AP14555 144 aa6.5□□□□□ -1.37
EPHA4-213ENST00000495693 IGFL4Q6B9Z1 124 aa6.5□□□□□ -1.37
EPHA4-213ENST00000495693 ZNF705AQ6ZN79 300 aaPredicted RBP6.5□□□□□ -1.37
EPHA4-213ENST00000495693 SPATA12Q7Z6I5 190 aa6.5□□□□□ -1.37
EPHA4-213ENST00000495693 DEFB125Q8N687 156 aa6.5□□□□□ -1.37
EPHA4-213ENST00000495693 C4orf3Q8WVX3 66 aa6.5□□□□□ -1.37
EPHA4-213ENST00000495693 DPF1Q92782 380 aa6.5□□□□□ -1.37
EPHA4-213ENST00000495693 FAM19A4Q96LR4 140 aa6.5□□□□□ -1.37
EPHA4-213ENST00000495693 MIEN1Q9BRT3 115 aa6.5□□□□□ -1.37
EPHA4-213ENST00000495693 UQCR10Q9UDW1 63 aa6.5□□□□□ -1.37
EPHA4-213ENST00000495693 WNK2Q9Y3S1 2297 aa6.5□□□□□ -1.37
EPHA4-213ENST00000495693 TRAV9-2A0A087WT02 112 aa6.49□□□□□ -1.37
EPHA4-213ENST00000495693 IGKV3D-20A0A0C4DH25 116 aa6.49□□□□□ -1.37
EPHA4-213ENST00000495693 TMEM213A2RRL7 107 aa6.49□□□□□ -1.37
EPHA4-213ENST00000495693 PRSS47A8MTI9 375 aa6.49□□□□□ -1.37
EPHA4-213ENST00000495693 LINC01619G3V211 115 aa6.49□□□□□ -1.37
EPHA4-213ENST00000495693 MRPL51Q4U2R6 128 aaKnown RBP6.49□□□□□ -1.37
EPHA4-213ENST00000495693 FAM159AQ6UWV7 190 aa6.49□□□□□ -1.37
EPHA4-213ENST00000495693 AMN1Q8IY45 258 aa6.49□□□□□ -1.37
EPHA4-213ENST00000495693 FAM19A2Q8N3H0 131 aa6.49□□□□□ -1.37
EPHA4-213ENST00000495693 DCANP1Q8TF63 244 aa6.49□□□□□ -1.37
EPHA4-213ENST00000495693 AP1S3Q96PC3 154 aa6.49□□□□□ -1.37
EPHA4-213ENST00000495693 MS4A6AQ9H2W1 248 aa6.49□□□□□ -1.37
EPHA4-213ENST00000495693 PRO1933Q9H354 126 aa6.49□□□□□ -1.37
EPHA4-213ENST00000495693 TMEM160Q9NX00 188 aa6.49□□□□□ -1.37
EPHA4-213ENST00000495693 HRNRQ86YZ3 2850 aaPredicted RBP6.49□□□□□ -1.37
EPHA4-213ENST00000495693 KALRNO60229 2985 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 LINC01546A6NGU7 62 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 C2orf70A6NJV1 201 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 KLLNB2CW77 178 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 SYS1-DBNDD2H3BUS1 97 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 K7EQG2 157 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 M0R143 59 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 M0R381 172 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 CD5LO43866 347 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 HOXD3P31249 432 aaPredicted RBP6.48□□□□□ -1.37
EPHA4-213ENST00000495693 KRTAP10-9P60411 292 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 SPATA45Q537H7 98 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 FOXI2Q6ZQN5 318 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 ZFAND2AQ8N6M9 145 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 MAPK1IP1LQ8NDC0 245 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 C14orf144Q96I85 54 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 KRTAP4-5Q9BYR2 181 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 DPH3P1Q9H4G8 78 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 ST20Q9HBF5 79 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 PAM16Q9Y3D7 125 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 PHLDA3Q9Y5J5 127 aa6.48□□□□□ -1.37
EPHA4-213ENST00000495693 PRRC2AP48634 2157 aaKnown RBP6.48□□□□□ -1.37
EPHA4-213ENST00000495693 NBEAQ8NFP9 2946 aa6.47□□□□□ -1.37
EPHA4-213ENST00000495693 CHD8Q9HCK8 2581 aa6.47□□□□□ -1.37
EPHA4-213ENST00000495693 SMG1Q96Q15 3661 aaKnown RBP6.47□□□□□ -1.37
EPHA4-213ENST00000495693 TRAV25A0A0B4J276 109 aa6.47□□□□□ -1.37
EPHA4-213ENST00000495693 CSN3P07498 182 aa6.47□□□□□ -1.37
EPHA4-213ENST00000495693 SMIM17P0DL12 118 aa6.47□□□□□ -1.37
EPHA4-213ENST00000495693 CMC4P56277 68 aaPredicted RBP6.47□□□□□ -1.37
EPHA4-213ENST00000495693 SYNJ2BPP57105 145 aa6.47□□□□□ -1.37
EPHA4-213ENST00000495693 TMEM95Q3KNT9 176 aa6.47□□□□□ -1.37
EPHA4-213ENST00000495693 URB1-AS1Q96HZ7 61 aa6.47□□□□□ -1.37
EPHA4-213ENST00000495693 PMCHL2Q9BQD1 86 aa6.47□□□□□ -1.37
EPHA4-213ENST00000495693 SIGLEC8Q9NYZ4 499 aa6.47□□□□□ -1.37
EPHA4-213ENST00000495693 ABCA2Q9BZC7 2435 aa6.47□□□□□ -1.37
EPHA4-213ENST00000495693 CACNA1BQ00975 2339 aa6.47□□□□□ -1.37
EPHA4-213ENST00000495693 IGHV4OR15-8A0A075B7B6 117 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 A0A087WW49 117 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 C7orf71A4D174 169 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 OR4C46A6NHA9 309 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 ATP5LO75964 103 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 CDKN1BP46527 198 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 LGALS9BQ3B8N2 356 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 TDRG1Q3Y452 100 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 ORMDL2Q53FV1 153 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 LGALS9CQ6DKI2 356 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 Q8N8P6 123 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 Q8N976 141 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 OR2K2Q8NGT1 345 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 ZNF418Q8TF45 676 aaPredicted RBP6.46□□□□□ -1.38
EPHA4-213ENST00000495693 RNF185Q96GF1 192 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 C20orf78Q9BR46 151 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 C2orf88Q9BSF0 95 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 SCRT2Q9NQ03 307 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 ITPR1Q14643 2758 aa6.46□□□□□ -1.38
EPHA4-213ENST00000495693 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.45□□□□□ -1.38
EPHA4-213ENST00000495693 TRGV11A0A075B6L2 103 aa6.45□□□□□ -1.38
EPHA4-213ENST00000495693 A0A0J9YX75 114 aa6.45□□□□□ -1.38
EPHA4-213ENST00000495693 H3BVH4 76 aa6.45□□□□□ -1.38
EPHA4-213ENST00000495693 TCAPO15273 167 aa6.45□□□□□ -1.38
EPHA4-213ENST00000495693 NXPH4O95158 308 aa6.45□□□□□ -1.38
EPHA4-213ENST00000495693 TNFRSF6BO95407 300 aa6.45□□□□□ -1.38
EPHA4-213ENST00000495693 RNASE4P34096 147 aaKnown RBP6.45□□□□□ -1.38
EPHA4-213ENST00000495693 IFI27P40305 119 aaPredicted RBP6.45□□□□□ -1.38
EPHA4-213ENST00000495693 HNRNPA3P51991 378 aaKnown RBP6.45□□□□□ -1.38
EPHA4-213ENST00000495693 LINC01545Q5VT33 79 aa6.45□□□□□ -1.38
EPHA4-213ENST00000495693 LURAP1LQ8IV03 231 aa6.45□□□□□ -1.38
EPHA4-213ENST00000495693 OR9G4Q8NGQ1 327 aa6.45□□□□□ -1.38
EPHA4-213ENST00000495693 OR1N2Q8NGR9 330 aa6.45□□□□□ -1.38
EPHA4-213ENST00000495693 DYNLRB2Q8TF09 96 aa6.45□□□□□ -1.38
EPHA4-213ENST00000495693 RELNP78509 3460 aa6.44□□□□□ -1.38
EPHA4-213ENST00000495693 IGKV3-7A0A075B6H7 116 aa6.44□□□□□ -1.38
EPHA4-213ENST00000495693 B5MCH6 92 aa6.44□□□□□ -1.38
EPHA4-213ENST00000495693 NPYP01303 97 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms