RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 CFHR4Q92496 578 aa12.81□□□□□ -0.36
SYP-208ENST00000494396 PSMG3-AS1Q96PY0 264 aa12.81□□□□□ -0.36
SYP-208ENST00000494396 TMEM160Q9NX00 188 aa12.81□□□□□ -0.36
SYP-208ENST00000494396 CHD6Q8TD26 2715 aa12.81□□□□□ -0.36
SYP-208ENST00000494396 IGKV2-40A0A087WW87 121 aaPredicted RBP12.81□□□□□ -0.36
SYP-208ENST00000494396 TRAV40A0A0B4J280 105 aa12.81□□□□□ -0.36
SYP-208ENST00000494396 K7EMI3 77 aa12.81□□□□□ -0.36
SYP-208ENST00000494396 IGKV2D-40P01614 121 aaPredicted RBP12.81□□□□□ -0.36
SYP-208ENST00000494396 ORM1P02763 201 aa12.81□□□□□ -0.36
SYP-208ENST00000494396 C1QTNF4Q9BXJ3 329 aa12.81□□□□□ -0.36
SYP-208ENST00000494396 TTTY13Q9BZ97 58 aa12.81□□□□□ -0.36
SYP-208ENST00000494396 MRPL35Q9NZE8 188 aaKnown RBP12.81□□□□□ -0.36
SYP-208ENST00000494396 CYSLTR1Q9Y271 337 aa12.81□□□□□ -0.36
SYP-208ENST00000494396 WNK2Q9Y3S1 2297 aa12.79□□□□□ -0.36
SYP-208ENST00000494396 H7C1H1 209 aa12.79□□□□□ -0.36
SYP-208ENST00000494396 APOMO95445 188 aa12.79□□□□□ -0.36
SYP-208ENST00000494396 ZNF80P51504 273 aaPredicted RBP12.79□□□□□ -0.36
SYP-208ENST00000494396 SH2D6Q7Z4S9 175 aa12.79□□□□□ -0.36
SYP-208ENST00000494396 ZNF575Q86XF7 245 aa12.79□□□□□ -0.36
SYP-208ENST00000494396 MED13LQ71F56 2210 aa12.79□□□□□ -0.36
SYP-208ENST00000494396 F8VRH5 84 aa12.79□□□□□ -0.36
SYP-208ENST00000494396 SLC25A16P16260 332 aa12.79□□□□□ -0.36
SYP-208ENST00000494396 FOXI1Q12951 378 aa12.79□□□□□ -0.36
SYP-208ENST00000494396 MINOS1Q5TGZ0 78 aa12.79□□□□□ -0.36
SYP-208ENST00000494396 NPBQ8NG41 125 aa12.79□□□□□ -0.36
SYP-208ENST00000494396 MINOS1-NBL1R4GNA1 71 aa12.79□□□□□ -0.36
SYP-208ENST00000494396 CRYBG3Q68DQ2 2970 aa12.78□□□□□ -0.36
SYP-208ENST00000494396 MYMXA0A1B0GTQ4 84 aa12.78□□□□□ -0.36
SYP-208ENST00000494396 OOSP1A8MZH6 123 aa12.78□□□□□ -0.36
SYP-208ENST00000494396 OR11H12B2RN74 326 aa12.78□□□□□ -0.36
SYP-208ENST00000494396 HOXA3O43365 443 aaPredicted RBP12.78□□□□□ -0.36
SYP-208ENST00000494396 OR11H1Q8NG94 326 aa12.78□□□□□ -0.36
SYP-208ENST00000494396 OR11H2Q8NH07 326 aa12.78□□□□□ -0.36
SYP-208ENST00000494396 ZNF418Q8TF45 676 aaPredicted RBP12.78□□□□□ -0.36
SYP-208ENST00000494396 DLX4Q92988 240 aaPredicted RBP12.78□□□□□ -0.36
SYP-208ENST00000494396 IGLV11-55A0A075B6I3 123 aa12.77□□□□□ -0.36
SYP-208ENST00000494396 IGHV4-61A0A0C4DH41 118 aa12.77□□□□□ -0.36
SYP-208ENST00000494396 NBR2O15453 112 aa12.77□□□□□ -0.36
SYP-208ENST00000494396 NDUFA3O95167 84 aa12.77□□□□□ -0.36
SYP-208ENST00000494396 MAPKAPK5-AS1Q8N8E1 139 aa12.77□□□□□ -0.36
SYP-208ENST00000494396 MSRB1Q9NZV6 116 aa12.77□□□□□ -0.36
SYP-208ENST00000494396 IGHV4-4A0A075B6R2 117 aa12.77□□□□□ -0.37
SYP-208ENST00000494396 UBE2E1P51965 193 aa12.77□□□□□ -0.37
SYP-208ENST00000494396 KMT2BQ9UMN6 2715 aaPredicted RBP12.77□□□□□ -0.37
SYP-208ENST00000494396 DSCR9P59020 149 aa12.76□□□□□ -0.37
SYP-208ENST00000494396 CFAP126Q5VTH2 177 aa12.76□□□□□ -0.37
SYP-208ENST00000494396 NRGNQ92686 78 aa12.76□□□□□ -0.37
SYP-208ENST00000494396 CENPEQ02224 2701 aa12.76□□□□□ -0.37
SYP-208ENST00000494396 IGHV4-30-2A0A087WSY4 118 aa12.76□□□□□ -0.37
SYP-208ENST00000494396 C21orf62Q9NYP8 219 aa12.76□□□□□ -0.37
SYP-208ENST00000494396 USP9YO00507 2555 aaPredicted RBP12.75□□□□□ -0.37
SYP-208ENST00000494396 ORMDL2Q53FV1 153 aa12.75□□□□□ -0.37
SYP-208ENST00000494396 C8orf86Q6ZUL3 223 aa12.75□□□□□ -0.37
SYP-208ENST00000494396 DYNAPQ8N1N2 210 aa12.75□□□□□ -0.37
SYP-208ENST00000494396 NRACQ8N912 160 aa12.75□□□□□ -0.37
SYP-208ENST00000494396 SLC50A1Q9BRV3 221 aa12.75□□□□□ -0.37
SYP-208ENST00000494396 HIF1ANQ9NWT6 349 aa12.75□□□□□ -0.37
SYP-208ENST00000494396 IGHG4P01861 327 aa12.74□□□□□ -0.37
SYP-208ENST00000494396 CRYBA4P53673 196 aa12.74□□□□□ -0.37
SYP-208ENST00000494396 HES1Q14469 280 aa12.74□□□□□ -0.37
SYP-208ENST00000494396 Q8TAT8 98 aa12.74□□□□□ -0.37
SYP-208ENST00000494396 GEMIN7Q9H840 131 aaKnown RBP12.74□□□□□ -0.37
SYP-208ENST00000494396 CLUHP3Q96NS8 147 aa12.74□□□□□ -0.37
SYP-208ENST00000494396 FANCD2OSQ96PS1 177 aa12.74□□□□□ -0.37
SYP-208ENST00000494396 LINC01549A6NIU2 74 aa12.73□□□□□ -0.37
SYP-208ENST00000494396 MORN3Q6PF18 240 aaPredicted RBP12.73□□□□□ -0.37
SYP-208ENST00000494396 AMTNQ6UX39 209 aa12.73□□□□□ -0.37
SYP-208ENST00000494396 MRPL53Q96EL3 112 aaKnown RBP12.73□□□□□ -0.37
SYP-208ENST00000494396 F8W735 103 aaPredicted RBP12.73□□□□□ -0.37
SYP-208ENST00000494396 C5orf64Q2M2E5 130 aa12.73□□□□□ -0.37
SYP-208ENST00000494396 ABCA1O95477 2261 aa12.72□□□□□ -0.37
SYP-208ENST00000494396 AGRNO00468 2067 aa12.72□□□□□ -0.37
SYP-208ENST00000494396 TRBV20-1A0A075B6N2 111 aa12.72□□□□□ -0.37
SYP-208ENST00000494396 GAS8-AS1O95177 125 aa12.72□□□□□ -0.37
SYP-208ENST00000494396 Q8N6K4 173 aa12.72□□□□□ -0.37
SYP-208ENST00000494396 PPDPFLQ8WWR9 84 aa12.72□□□□□ -0.37
SYP-208ENST00000494396 SAA4P35542 130 aa12.71□□□□□ -0.37
SYP-208ENST00000494396 EBI3Q14213 229 aa12.71□□□□□ -0.37
SYP-208ENST00000494396 C20orf78Q9BR46 151 aa12.71□□□□□ -0.37
SYP-208ENST00000494396 PGPEP1Q9NXJ5 209 aa12.71□□□□□ -0.37
SYP-208ENST00000494396 SMAD5-AS1Q9Y6J3 95 aa12.71□□□□□ -0.37
SYP-208ENST00000494396 UBE2D1P51668 147 aa12.71□□□□□ -0.38
SYP-208ENST00000494396 SYT8Q8NBV8 401 aa12.71□□□□□ -0.38
SYP-208ENST00000494396 TOMM6Q96B49 74 aa12.71□□□□□ -0.38
SYP-208ENST00000494396 SMIM2Q9BVW6 85 aa12.71□□□□□ -0.38
SYP-208ENST00000494396 CDIP1Q9H305 208 aa12.71□□□□□ -0.38
SYP-208ENST00000494396 MAP1AP78559 2803 aaPredicted RBP12.71□□□□□ -0.38
SYP-208ENST00000494396 ABCA2Q9BZC7 2435 aa12.71□□□□□ -0.38
SYP-208ENST00000494396 TRAV26-1A0A087WT03 109 aa12.7□□□□□ -0.38
SYP-208ENST00000494396 NPFFO15130 113 aa12.7□□□□□ -0.38
SYP-208ENST00000494396 SPINK8P0C7L1 97 aa12.7□□□□□ -0.38
SYP-208ENST00000494396 GATA1P15976 413 aaPredicted RBP12.7□□□□□ -0.38
SYP-208ENST00000494396 PTPN13Q12923 2485 aa12.7□□□□□ -0.38
SYP-208ENST00000494396 ANKRD17O75179 2603 aaKnown RBP12.7□□□□□ -0.38
SYP-208ENST00000494396 CENPVL3A0A0U1RRI6 287 aa12.69□□□□□ -0.38
SYP-208ENST00000494396 TMEM262E9PQX1 116 aa12.69□□□□□ -0.38
SYP-208ENST00000494396 UBE2D3P61077 147 aa12.69□□□□□ -0.38
SYP-208ENST00000494396 UBE2D2P62837 147 aa12.69□□□□□ -0.38
SYP-208ENST00000494396 ATP5G2Q06055 141 aa12.69□□□□□ -0.38
SYP-208ENST00000494396 NEXN-AS1Q8NBZ9 246 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms