RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 DNAH14Q0VDD8 3507 aa5.19□□□□□ -1.58
EWSR1-220ENST00000493426 IGLV11-55A0A075B6I3 123 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 IGKV3D-20A0A0C4DH25 116 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 IGHV7-4-1A0A0J9YVY3 117 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 A0A0J9YX75 114 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 TRBV30A0A0K0K1B3 111 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 C11orf86A6NJI1 115 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 LY6LH3BQJ8 138 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 TMEM178BH3BS89 294 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 IGHV3-33P01772 117 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 ORM1P02763 201 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 GATA1P15976 413 aaPredicted RBP5.18□□□□□ -1.58
EWSR1-220ENST00000493426 PRTN3P24158 256 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 Q8N1Y9 231 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 CNEP1R1Q8N9A8 125 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 NPBQ8NG41 125 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 BAALCQ8WXS3 180 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 ODF3Q96PU9 254 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 ARRDC1-AS1Q9H2J1 176 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 SMAD5-AS1Q9Y6J3 95 aa5.18□□□□□ -1.58
EWSR1-220ENST00000493426 DNAJC13O75165 2243 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 IGHV4OR15-8A0A075B7B6 117 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 A0A087WW49 117 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 IGKV2-40A0A087WW87 121 aaPredicted RBP5.17□□□□□ -1.58
EWSR1-220ENST00000493426 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.17□□□□□ -1.58
EWSR1-220ENST00000493426 TRAV4A0A0B4J268 109 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 IGHV1-3A0A0C4DH29 117 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 TRBV10-2A0A0K0K1G8 114 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 F8W735 103 aaPredicted RBP5.17□□□□□ -1.58
EWSR1-220ENST00000493426 CCDC179H3BU77 68 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 LGALS9O00182 355 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 CDX4O14627 284 aaPredicted RBP5.17□□□□□ -1.58
EWSR1-220ENST00000493426 ENSAO43768 121 aaKnown RBP5.17□□□□□ -1.58
EWSR1-220ENST00000493426 SCGB2A1O75556 95 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 IGKV2D-40P01614 121 aaPredicted RBP5.17□□□□□ -1.58
EWSR1-220ENST00000493426 CLEC3BP05452 202 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 LOXP28300 417 aaPredicted RBP5.17□□□□□ -1.58
EWSR1-220ENST00000493426 SUMO2P61956 95 aaKnown RBP5.17□□□□□ -1.58
EWSR1-220ENST00000493426 GFRALQ6UXV0 394 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 C9orf47Q6ZRZ4 202 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 SMIM20Q8N5G0 67 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 TMEM263Q8WUH6 116 aaKnown RBP5.17□□□□□ -1.58
EWSR1-220ENST00000493426 PLEKHB2Q96CS7 222 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 TIMD4Q96H15 378 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 TMEM141Q96I45 108 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 DNAJC30Q96LL9 226 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 AMELXQ99217 191 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 CACNA1GO43497 2377 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 CEP295Q9C0D2 2601 aa5.17□□□□□ -1.58
EWSR1-220ENST00000493426 PRR14LQ5THK1 2151 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 IGHV3-21A0A0B4J1V1 117 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 TRAV8-2A0A0B4J237 113 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 TRAV8-4A0A0B4J246 113 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 IGIPA6NJ69 53 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 LINC01548A6NM66 108 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 C17orf100A8MU93 164 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 BUB1B-PAK6H3BSN5 160 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 H3BT86 120 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 BRI3O95415 125 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 ACYP1P07311 99 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 CRYGDP07320 174 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 LORP23490 312 aaPredicted RBP5.16□□□□□ -1.58
EWSR1-220ENST00000493426 ARL3P36405 182 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 EFNA4P52798 201 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 RPS28P62857 69 aaKnown RBP5.16□□□□□ -1.58
EWSR1-220ENST00000493426 HES1Q14469 280 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 ATXN8Q156A1 80 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 LINC01620Q4KN68 170 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 C2orf66Q6UXQ4 117 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 SCGB1D4Q6XE38 83 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 CFHR4Q92496 578 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 FANCD2OSQ96PS1 177 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 LINC01587Q99440 93 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 KIR2DL4Q99706 377 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 NCOR2Q9Y618 2525 aa5.16□□□□□ -1.58
EWSR1-220ENST00000493426 IGLV4-69A0A075B6H9 119 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 A0A1B0GX51 115 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 A0A1W2PNU3 283 aaPredicted RBP5.15□□□□□ -1.59
EWSR1-220ENST00000493426 C9JAW5 83 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 M0R1B8 84 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 M0R2P5 195 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 CRLF1O75462 422 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 DUSP14O95147 198 aaKnown RBP5.15□□□□□ -1.59
EWSR1-220ENST00000493426 ATP5G1P05496 136 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 EBI3Q14213 229 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 PMVKQ15126 192 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 FAM159AQ6UWV7 190 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 SEM1Q6ZVN7 128 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 DYNAPQ8N1N2 210 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 C15orf53Q8NAA6 179 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 NRGNQ92686 78 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 TIMM17AQ99595 171 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 VKORC1Q9BQB6 163 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 C21orf62Q9NYP8 219 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 C11orf21Q9P2W6 132 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 ONECUT1Q9UBC0 465 aa5.15□□□□□ -1.59
EWSR1-220ENST00000493426 INTS1Q8N201 2190 aaKnown RBP5.14□□□□□ -1.59
EWSR1-220ENST00000493426 TRAV17A0A0B4J275 112 aa5.14□□□□□ -1.59
EWSR1-220ENST00000493426 SDHAF1A6NFY7 115 aa5.14□□□□□ -1.59
EWSR1-220ENST00000493426 TIMM23O14925 209 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms