RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 MYO9AB2RTY4 2548 aa10.51□□□□□ -0.73
PTPN7-216ENST00000492977 KLLNB2CW77 178 aa10.51□□□□□ -0.73
PTPN7-216ENST00000492977 ZNF324O75467 553 aaPredicted RBP10.51□□□□□ -0.73
PTPN7-216ENST00000492977 CSN3P07498 182 aa10.51□□□□□ -0.73
PTPN7-216ENST00000492977 OR5AL1P0C617 328 aa10.51□□□□□ -0.73
PTPN7-216ENST00000492977 CD28P10747 220 aa10.51□□□□□ -0.73
PTPN7-216ENST00000492977 RNASE4P34096 147 aaKnown RBP10.51□□□□□ -0.73
PTPN7-216ENST00000492977 PRR31Q5SQ13 230 aa10.51□□□□□ -0.73
PTPN7-216ENST00000492977 EBLN2Q6P2I7 272 aa10.51□□□□□ -0.73
PTPN7-216ENST00000492977 RAX2Q96IS3 184 aa10.51□□□□□ -0.73
PTPN7-216ENST00000492977 DUX3Q96PT4 197 aa10.51□□□□□ -0.73
PTPN7-216ENST00000492977 TMEM191AQ9H0A3 160 aa10.51□□□□□ -0.73
PTPN7-216ENST00000492977 MUC21A0A0G2JKD1 596 aa10.5□□□□□ -0.73
PTPN7-216ENST00000492977 MUC21A0A140T8X8 626 aa10.5□□□□□ -0.73
PTPN7-216ENST00000492977 SNAI2O43623 268 aa10.5□□□□□ -0.73
PTPN7-216ENST00000492977 DUSP14O95147 198 aaKnown RBP10.5□□□□□ -0.73
PTPN7-216ENST00000492977 LEPP41159 167 aa10.5□□□□□ -0.73
PTPN7-216ENST00000492977 SSTP61278 116 aa10.5□□□□□ -0.73
PTPN7-216ENST00000492977 FHL3Q13643 280 aa10.5□□□□□ -0.73
PTPN7-216ENST00000492977 MUC21Q5SSG8 566 aa10.5□□□□□ -0.73
PTPN7-216ENST00000492977 Q6ZQT7 251 aa10.5□□□□□ -0.73
PTPN7-216ENST00000492977 NIT1Q86X76 327 aa10.5□□□□□ -0.73
PTPN7-216ENST00000492977 U3KQK5 164 aa10.5□□□□□ -0.73
PTPN7-216ENST00000492977 IGHV4-4A0A075B6R2 117 aa10.49□□□□□ -0.73
PTPN7-216ENST00000492977 J3KRW8 73 aa10.49□□□□□ -0.73
PTPN7-216ENST00000492977 CCL24O00175 119 aa10.49□□□□□ -0.73
PTPN7-216ENST00000492977 AMTP48728 403 aa10.49□□□□□ -0.73
PTPN7-216ENST00000492977 CACNG7P62955 275 aa10.49□□□□□ -0.73
PTPN7-216ENST00000492977 FOXI2Q6ZQN5 318 aa10.49□□□□□ -0.73
PTPN7-216ENST00000492977 CHCHD1Q96BP2 118 aaKnown RBP10.49□□□□□ -0.73
PTPN7-216ENST00000492977 HECTD1Q9ULT8 2610 aa10.49□□□□□ -0.73
PTPN7-216ENST00000492977 HSBP1O75506 76 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 Q6ZWC4 215 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 LURAP1LQ8IV03 231 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 AMN1Q8IY45 258 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 DYNLRB2Q8TF09 96 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 CITED2Q99967 270 aaPredicted RBP10.48□□□□□ -0.73
PTPN7-216ENST00000492977 HIVEP2P31629 2446 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 MED14OSP0DP75 135 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 FOSL1P15407 271 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 PMCHP20382 165 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 TSPOP30536 169 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 DEFB114Q30KQ6 69 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 MRPL51Q4U2R6 128 aaKnown RBP10.48□□□□□ -0.73
PTPN7-216ENST00000492977 RNASEKQ6P5S7 137 aaKnown RBP10.48□□□□□ -0.73
PTPN7-216ENST00000492977 ORMDL3Q8N138 153 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 C11orf44Q8N8P7 122 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 MSRB1Q9NZV6 116 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 NAGKQ9UJ70 344 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 RNF114Q9Y508 228 aa10.48□□□□□ -0.73
PTPN7-216ENST00000492977 A0A1W2PRX2 142 aa10.47□□□□□ -0.73
PTPN7-216ENST00000492977 LINC00614P0C842 121 aa10.47□□□□□ -0.73
PTPN7-216ENST00000492977 ASIPP42127 132 aa10.47□□□□□ -0.73
PTPN7-216ENST00000492977 ANXA2RQ3ZCQ2 193 aa10.47□□□□□ -0.73
PTPN7-216ENST00000492977 CDPF1Q6NVV7 123 aa10.47□□□□□ -0.73
PTPN7-216ENST00000492977 TMEM61Q8N0U2 210 aa10.47□□□□□ -0.73
PTPN7-216ENST00000492977 URB1-AS1Q96HZ7 61 aa10.47□□□□□ -0.73
PTPN7-216ENST00000492977 ZMAT5Q9UDW3 170 aaKnown RBP10.47□□□□□ -0.73
PTPN7-216ENST00000492977 TRAV25A0A0B4J276 109 aa10.46□□□□□ -0.74
PTPN7-216ENST00000492977 D6R8Y8 96 aa10.46□□□□□ -0.74
PTPN7-216ENST00000492977 PPBPP02775 128 aa10.46□□□□□ -0.74
PTPN7-216ENST00000492977 KIR3DS1Q14943 382 aa10.46□□□□□ -0.74
PTPN7-216ENST00000492977 SPANXN1Q5VSR9 72 aa10.46□□□□□ -0.74
PTPN7-216ENST00000492977 SMIM15Q7Z3B0 74 aa10.46□□□□□ -0.74
PTPN7-216ENST00000492977 FAM19A2Q8N3H0 131 aa10.46□□□□□ -0.74
PTPN7-216ENST00000492977 OR10AG1Q8NH19 301 aa10.46□□□□□ -0.74
PTPN7-216ENST00000492977 GSN-AS1Q9NRJ2 163 aa10.46□□□□□ -0.74
PTPN7-216ENST00000492977 SIGLEC8Q9NYZ4 499 aa10.46□□□□□ -0.74
PTPN7-216ENST00000492977 C7orf71A4D174 169 aa10.45□□□□□ -0.74
PTPN7-216ENST00000492977 H3BVH4 76 aa10.45□□□□□ -0.74
PTPN7-216ENST00000492977 SCGB1D1O95968 90 aa10.45□□□□□ -0.74
PTPN7-216ENST00000492977 RAB4AP20338 218 aa10.45□□□□□ -0.74
PTPN7-216ENST00000492977 S100A4P26447 101 aaKnown RBP10.45□□□□□ -0.74
PTPN7-216ENST00000492977 PROK1P58294 105 aa10.45□□□□□ -0.74
PTPN7-216ENST00000492977 HIST2H2BDQ6DRA6 164 aa10.45□□□□□ -0.74
PTPN7-216ENST00000492977 RNF185Q96GF1 192 aa10.45□□□□□ -0.74
PTPN7-216ENST00000492977 PRELID3AQ96N28 172 aa10.45□□□□□ -0.74
PTPN7-216ENST00000492977 M0R2Z0 102 aa10.44□□□□□ -0.74
PTPN7-216ENST00000492977 CKS2P33552 79 aa10.44□□□□□ -0.74
PTPN7-216ENST00000492977 CDKN1BP46527 198 aa10.44□□□□□ -0.74
PTPN7-216ENST00000492977 FAM159AQ6UWV7 190 aa10.44□□□□□ -0.74
PTPN7-216ENST00000492977 SPAG8Q99932 426 aaPredicted RBP10.44□□□□□ -0.74
PTPN7-216ENST00000492977 SCRT2Q9NQ03 307 aa10.44□□□□□ -0.74
PTPN7-216ENST00000492977 OR4C46A6NHA9 309 aa10.43□□□□□ -0.74
PTPN7-216ENST00000492977 A8MTW9 85 aa10.43□□□□□ -0.74
PTPN7-216ENST00000492977 TCF21O43680 179 aa10.43□□□□□ -0.74
PTPN7-216ENST00000492977 DEFB131AP59861 70 aa10.43□□□□□ -0.74
PTPN7-216ENST00000492977 CD300EQ496F6 205 aaPredicted RBP10.43□□□□□ -0.74
PTPN7-216ENST00000492977 LAMTOR2Q9Y2Q5 125 aa10.43□□□□□ -0.74
PTPN7-216ENST00000492977 ANK3Q12955 4377 aaKnown RBP10.43□□□□□ -0.74
PTPN7-216ENST00000492977 MTORP42345 2549 aa10.43□□□□□ -0.74
PTPN7-216ENST00000492977 TRAV12-3A0A0B4J271 114 aa10.43□□□□□ -0.74
PTPN7-216ENST00000492977 INAFM1C9JVW0 142 aa10.43□□□□□ -0.74
PTPN7-216ENST00000492977 GNRH2O43555 120 aa10.43□□□□□ -0.74
PTPN7-216ENST00000492977 HLA-DRB4P13762 266 aa10.43□□□□□ -0.74
PTPN7-216ENST00000492977 TDRG1Q3Y452 100 aa10.43□□□□□ -0.74
PTPN7-216ENST00000492977 AMTNQ6UX39 209 aa10.43□□□□□ -0.74
PTPN7-216ENST00000492977 PRSS3P2Q8NHM4 247 aa10.43□□□□□ -0.74
PTPN7-216ENST00000492977 HLA-DRB4X5D2U9 266 aa10.43□□□□□ -0.74
PTPN7-216ENST00000492977 IGKV3-20P01619 116 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms