RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	TMSB15B	A0A087X1C1	80 aa		10.89	□□□□□ -0.67
COPS7B-222	ENST00000492423	AMBP	P02760	352 aa		10.89	□□□□□ -0.67
COPS7B-222	ENST00000492423	ORM1	P02763	201 aa		10.89	□□□□□ -0.67
COPS7B-222	ENST00000492423	GZMB	P10144	247 aa		10.89	□□□□□ -0.67
COPS7B-222	ENST00000492423	ELOB	Q15370	118 aa		10.89	□□□□□ -0.67
COPS7B-222	ENST00000492423	GTSF1	Q8WW33	167 aa		10.89	□□□□□ -0.67
COPS7B-222	ENST00000492423	URGCP-MRPS24	S4R325	110 aa		10.89	□□□□□ -0.67
COPS7B-222	ENST00000492423		A8MWL6	223 aa		10.88	□□□□□ -0.67
COPS7B-222	ENST00000492423	TCL1A	P56279	114 aa		10.88	□□□□□ -0.67
COPS7B-222	ENST00000492423	FAM3B	P58499	235 aa	Predicted RBP	10.88	□□□□□ -0.67
COPS7B-222	ENST00000492423	ANXA2R	Q3ZCQ2	193 aa		10.88	□□□□□ -0.67
COPS7B-222	ENST00000492423	MUC21	Q5SSG8	566 aa		10.88	□□□□□ -0.67
COPS7B-222	ENST00000492423	MORN3	Q6PF18	240 aa	Predicted RBP	10.88	□□□□□ -0.67
COPS7B-222	ENST00000492423	NEU1	Q99519	415 aa		10.88	□□□□□ -0.67
COPS7B-222	ENST00000492423	VWF	P04275	2813 aa		10.87	□□□□□ -0.67
COPS7B-222	ENST00000492423	INS	P01308	110 aa		10.87	□□□□□ -0.67
COPS7B-222	ENST00000492423	CXCL1	P09341	107 aa		10.87	□□□□□ -0.67
COPS7B-222	ENST00000492423	IGLC6	P0CF74	106 aa		10.87	□□□□□ -0.67
COPS7B-222	ENST00000492423	RPS20	P60866	119 aa	Known RBP	10.87	□□□□□ -0.67
COPS7B-222	ENST00000492423	C20orf144	Q9BQM9	153 aa		10.87	□□□□□ -0.67
COPS7B-222	ENST00000492423	PYGO2	Q9BRQ0	406 aa		10.87	□□□□□ -0.67
COPS7B-222	ENST00000492423	GFRA4	Q9GZZ7	299 aa		10.87	□□□□□ -0.67
COPS7B-222	ENST00000492423	XCL2	Q9UBD3	114 aa		10.87	□□□□□ -0.67
COPS7B-222	ENST00000492423	NAGK	Q9UJ70	344 aa		10.87	□□□□□ -0.67
COPS7B-222	ENST00000492423	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.86	□□□□□ -0.67
COPS7B-222	ENST00000492423		A0A1W2PPQ1	181 aa		10.86	□□□□□ -0.67
COPS7B-222	ENST00000492423	GRIFIN	A4D1Z8	144 aa		10.86	□□□□□ -0.67
COPS7B-222	ENST00000492423	FAM231B	A6NCW3	169 aa		10.86	□□□□□ -0.67
COPS7B-222	ENST00000492423	COLCA2	A8K830	154 aa		10.86	□□□□□ -0.67
COPS7B-222	ENST00000492423	TYMS	P04818	313 aa		10.86	□□□□□ -0.67
COPS7B-222	ENST00000492423	S100P	P25815	95 aa		10.86	□□□□□ -0.67
COPS7B-222	ENST00000492423	NUTF2	P61970	127 aa	Known RBP	10.86	□□□□□ -0.67
COPS7B-222	ENST00000492423	KCNIP4	Q6PIL6	250 aa		10.86	□□□□□ -0.67
COPS7B-222	ENST00000492423	C1orf158	Q8N1D5	194 aa		10.86	□□□□□ -0.67
COPS7B-222	ENST00000492423	TRAV9-1	A0A075B6T8	112 aa		10.85	□□□□□ -0.67
COPS7B-222	ENST00000492423	IGHV1OR15-1	A0A075B7D0	117 aa		10.85	□□□□□ -0.67
COPS7B-222	ENST00000492423	HIGD1C	A8MV81	97 aa		10.85	□□□□□ -0.67
COPS7B-222	ENST00000492423	FOXA3	P55318	350 aa	Predicted RBP	10.85	□□□□□ -0.67
COPS7B-222	ENST00000492423	TDRG1	Q3Y452	100 aa		10.85	□□□□□ -0.67
COPS7B-222	ENST00000492423	DNLZ	Q5SXM8	178 aa		10.85	□□□□□ -0.67
COPS7B-222	ENST00000492423	NUP35	Q8NFH5	326 aa		10.85	□□□□□ -0.67
COPS7B-222	ENST00000492423	ZMAT5	Q9UDW3	170 aa	Known RBP	10.85	□□□□□ -0.67
COPS7B-222	ENST00000492423	NAT8B	Q9UHF3	227 aa		10.85	□□□□□ -0.67
COPS7B-222	ENST00000492423	TRBV24-1	A0A075B6N3	115 aa		10.84	□□□□□ -0.67
COPS7B-222	ENST00000492423	XKRY2	A2RUG3	117 aa		10.84	□□□□□ -0.67
COPS7B-222	ENST00000492423	IGHV4-30-4	P0DP06	118 aa		10.84	□□□□□ -0.67
COPS7B-222	ENST00000492423	CTRL	P40313	264 aa		10.84	□□□□□ -0.67
COPS7B-222	ENST00000492423	KPRP	Q5T749	579 aa	Predicted RBP	10.84	□□□□□ -0.67
COPS7B-222	ENST00000492423	FAM159A	Q6UWV7	190 aa		10.84	□□□□□ -0.67
COPS7B-222	ENST00000492423	CSNK1G2-AS1	Q8NCQ2	148 aa		10.84	□□□□□ -0.67
COPS7B-222	ENST00000492423	LINC00467	Q9BRT7	94 aa		10.84	□□□□□ -0.67
COPS7B-222	ENST00000492423	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.83	□□□□□ -0.68
COPS7B-222	ENST00000492423	GNRH2	O43555	120 aa		10.83	□□□□□ -0.68
COPS7B-222	ENST00000492423	XP32	Q5T750	250 aa		10.83	□□□□□ -0.68
COPS7B-222	ENST00000492423	FER1L6-AS1	Q8NA97	138 aa		10.83	□□□□□ -0.68
COPS7B-222	ENST00000492423	KCNS1	Q96KK3	526 aa		10.83	□□□□□ -0.68
COPS7B-222	ENST00000492423	PGLYRP4	Q96LB8	373 aa		10.83	□□□□□ -0.68
COPS7B-222	ENST00000492423	TP53TG3	Q9ULZ0	132 aa		10.83	□□□□□ -0.68
COPS7B-222	ENST00000492423	CMYA5	Q8N3K9	4069 aa		10.83	□□□□□ -0.68
COPS7B-222	ENST00000492423	MUC4	Q99102	2169 aa		10.82	□□□□□ -0.68
COPS7B-222	ENST00000492423		H3BVH4	76 aa		10.82	□□□□□ -0.68
COPS7B-222	ENST00000492423	SNAI2	O43623	268 aa		10.82	□□□□□ -0.68
COPS7B-222	ENST00000492423	FRMD6-AS1	P0C7T7	363 aa		10.82	□□□□□ -0.68
COPS7B-222	ENST00000492423	RNASE3	P12724	160 aa	Known RBP	10.82	□□□□□ -0.68
COPS7B-222	ENST00000492423	LYZL1	Q6UWQ5	148 aa		10.82	□□□□□ -0.68
COPS7B-222	ENST00000492423	BTF3L4	Q96K17	158 aa		10.82	□□□□□ -0.68
COPS7B-222	ENST00000492423	C1QTNF4	Q9BXJ3	329 aa		10.82	□□□□□ -0.68
COPS7B-222	ENST00000492423	CSTL1	Q9H114	145 aa		10.82	□□□□□ -0.68
COPS7B-222	ENST00000492423	TRRAP	Q9Y4A5	3859 aa		10.82	□□□□□ -0.68
COPS7B-222	ENST00000492423	IGHV3-16	A0A0C4DH30	117 aa		10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423	KIR2DL5B	A0A0G2JN68	375 aa		10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423	KIR2DL5B	A0A0G2JPC4	375 aa		10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423		A0A1B0GXF2	115 aa		10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423		A8MZ25	164 aa		10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423	SPINK4	O60575	86 aa		10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423	ARMS2	P0C7Q2	107 aa		10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423	MED14OS	P0DP75	135 aa		10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423	ASIP	P42127	132 aa		10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423	MRPL54	Q6P161	138 aa	Known RBP	10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423	KIR2DL5A	Q8N109	375 aa		10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423	TMEM256	Q8N2U0	113 aa		10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423	KIR2DL5B	Q8NHK3	375 aa		10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423	FAM210B	Q96KR6	192 aa		10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423	LINC01587	Q99440	93 aa		10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.81	□□□□□ -0.68
COPS7B-222	ENST00000492423	PRM2	P04554	102 aa		10.8	□□□□□ -0.68
COPS7B-222	ENST00000492423	OR5AL1	P0C617	328 aa		10.8	□□□□□ -0.68
COPS7B-222	ENST00000492423	C9orf85	Q96MD7	179 aa		10.8	□□□□□ -0.68
COPS7B-222	ENST00000492423	SCRT2	Q9NQ03	307 aa		10.8	□□□□□ -0.68
COPS7B-222	ENST00000492423	TRGV11	A0A075B6L2	103 aa		10.79	□□□□□ -0.68
COPS7B-222	ENST00000492423	APOC4	P55056	127 aa		10.79	□□□□□ -0.68
COPS7B-222	ENST00000492423	ZNF705A	Q6ZN79	300 aa	Predicted RBP	10.79	□□□□□ -0.68
COPS7B-222	ENST00000492423	ATP5L2	Q7Z4Y8	100 aa		10.79	□□□□□ -0.68
COPS7B-222	ENST00000492423	TPPP3	Q9BW30	176 aa		10.79	□□□□□ -0.68
COPS7B-222	ENST00000492423	CNFN	Q9BYD5	112 aa		10.79	□□□□□ -0.68
COPS7B-222	ENST00000492423	MDFIC	Q9P1T7	246 aa		10.79	□□□□□ -0.68
COPS7B-222	ENST00000492423	GOLT1B	Q9Y3E0	138 aa		10.79	□□□□□ -0.68
COPS7B-222	ENST00000492423	IGHV3OR16-12	A0A075B7B8	117 aa		10.78	□□□□□ -0.68
COPS7B-222	ENST00000492423	MUC21	A0A0G2JKD1	596 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms