RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 PTH2Q96A98 100 aa7.96□□□□□ -1.14
SREBF2-208ENST00000491541 SPTBN4Q9H254 2564 aa7.96□□□□□ -1.14
SREBF2-208ENST00000491541 IGKV3-7A0A075B6H7 116 aa7.96□□□□□ -1.14
SREBF2-208ENST00000491541 TEX29Q8N6K0 151 aa7.96□□□□□ -1.14
SREBF2-208ENST00000491541 TOMM6Q96B49 74 aa7.96□□□□□ -1.14
SREBF2-208ENST00000491541 IGHV7-4-1A0A0J9YVY3 117 aa7.95□□□□□ -1.14
SREBF2-208ENST00000491541 GATA3P23771 443 aa7.95□□□□□ -1.14
SREBF2-208ENST00000491541 C8orf49Q96NF6 230 aa7.95□□□□□ -1.14
SREBF2-208ENST00000491541 FAM110AQ9BQ89 295 aa7.95□□□□□ -1.14
SREBF2-208ENST00000491541 H7C2G1 150 aa7.95□□□□□ -1.14
SREBF2-208ENST00000491541 ZNF491Q8N8L2 437 aa7.95□□□□□ -1.14
SREBF2-208ENST00000491541 CHD8Q9HCK8 2581 aa7.95□□□□□ -1.14
SREBF2-208ENST00000491541 CCL3L1P16619 93 aa7.95□□□□□ -1.14
SREBF2-208ENST00000491541 ODF3BA8MYP8 253 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 ZNF580Q9UK33 172 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 IGLV11-55A0A075B6I3 123 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 IGHV1-69DA0A0B4J2H0 117 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 HOXA3O43365 443 aaPredicted RBP7.94□□□□□ -1.14
SREBF2-208ENST00000491541 NHLRC4P0CG21 123 aaPredicted RBP7.94□□□□□ -1.14
SREBF2-208ENST00000491541 PRTN3P24158 256 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 CFAP161Q6P656 301 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 CFHR4Q92496 578 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 RAX2Q96IS3 184 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 RAB1BQ9H0U4 201 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 TRBV20-1A0A075B6N2 111 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 PRSS29PA6NIE9 313 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 ZFAND6Q6FIF0 208 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 IGHV4OR15-8A0A075B7B6 117 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 A0A087WW49 117 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 IGHV1-46P01743 117 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 ASIPP42127 132 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 RPL27AP46776 148 aaKnown RBP7.94□□□□□ -1.14
SREBF2-208ENST00000491541 TTC32Q5I0X7 151 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 SMIM20Q8N5G0 67 aa7.94□□□□□ -1.14
SREBF2-208ENST00000491541 TECTAO75443 2155 aa7.93□□□□□ -1.14
SREBF2-208ENST00000491541 Q8TAT8 98 aa7.93□□□□□ -1.14
SREBF2-208ENST00000491541 SCNM1Q9BWG6 230 aa7.93□□□□□ -1.14
SREBF2-208ENST00000491541 MRPL35Q9NZE8 188 aaKnown RBP7.93□□□□□ -1.14
SREBF2-208ENST00000491541 MDFICQ9P1T7 246 aa7.93□□□□□ -1.14
SREBF2-208ENST00000491541 ERCC8Q13216 396 aa7.93□□□□□ -1.14
SREBF2-208ENST00000491541 SIGLEC9Q9Y336 463 aa7.93□□□□□ -1.14
SREBF2-208ENST00000491541 FAM19A3Q7Z5A8 133 aa7.93□□□□□ -1.14
SREBF2-208ENST00000491541 BSNQ9UPA5 3926 aa7.93□□□□□ -1.14
SREBF2-208ENST00000491541 IGHV3OR16-8A0A075B7F1 116 aa7.92□□□□□ -1.14
SREBF2-208ENST00000491541 IGHV1-3A0A0C4DH29 117 aa7.92□□□□□ -1.14
SREBF2-208ENST00000491541 TMEM200BQ69YZ2 307 aa7.92□□□□□ -1.14
SREBF2-208ENST00000491541 CARD19Q96LW7 228 aa7.92□□□□□ -1.14
SREBF2-208ENST00000491541 VKORC1Q9BQB6 163 aa7.92□□□□□ -1.14
SREBF2-208ENST00000491541 IGKV2-40A0A087WW87 121 aaPredicted RBP7.92□□□□□ -1.14
SREBF2-208ENST00000491541 IGKV2D-40P01614 121 aaPredicted RBP7.92□□□□□ -1.14
SREBF2-208ENST00000491541 GATA1P15976 413 aaPredicted RBP7.92□□□□□ -1.14
SREBF2-208ENST00000491541 DIAPH2-AS1Q14236 149 aa7.92□□□□□ -1.14
SREBF2-208ENST00000491541 DLX4Q92988 240 aaPredicted RBP7.92□□□□□ -1.14
SREBF2-208ENST00000491541 PRR25Q96S07 402 aa7.92□□□□□ -1.14
SREBF2-208ENST00000491541 TRAV8-2A0A0B4J237 113 aa7.92□□□□□ -1.14
SREBF2-208ENST00000491541 C9orf47Q6ZRZ4 202 aa7.92□□□□□ -1.14
SREBF2-208ENST00000491541 C1orf122Q6ZSJ8 110 aa7.92□□□□□ -1.14
SREBF2-208ENST00000491541 UBTD1Q9HAC8 227 aa7.92□□□□□ -1.14
SREBF2-208ENST00000491541 SMAD5-AS1Q9Y6J3 95 aa7.92□□□□□ -1.14
SREBF2-208ENST00000491541 IGHV3-35A0A0C4DH35 117 aa7.91□□□□□ -1.14
SREBF2-208ENST00000491541 IGFL4Q6B9Z1 124 aa7.91□□□□□ -1.14
SREBF2-208ENST00000491541 LINC01560Q8TB33 94 aa7.91□□□□□ -1.14
SREBF2-208ENST00000491541 MSRB1Q9NZV6 116 aa7.91□□□□□ -1.14
SREBF2-208ENST00000491541 SH2D1AO60880 128 aa7.91□□□□□ -1.14
SREBF2-208ENST00000491541 SNCGO76070 127 aa7.91□□□□□ -1.14
SREBF2-208ENST00000491541 RPL7P18124 248 aaKnown RBP7.91□□□□□ -1.14
SREBF2-208ENST00000491541 HERV-K104P63124 156 aa7.91□□□□□ -1.14
SREBF2-208ENST00000491541 GAGE5Q13069 117 aa7.91□□□□□ -1.14
SREBF2-208ENST00000491541 GAGE6Q13070 117 aa7.91□□□□□ -1.14
SREBF2-208ENST00000491541 Q1RN00 199 aa7.91□□□□□ -1.14
SREBF2-208ENST00000491541 SPANXCQ9NY87 97 aa7.91□□□□□ -1.14
SREBF2-208ENST00000491541 RHODO00212 210 aa7.91□□□□□ -1.14
SREBF2-208ENST00000491541 LOXP28300 417 aaPredicted RBP7.91□□□□□ -1.14
SREBF2-208ENST00000491541 Q6ZUT4 128 aa7.91□□□□□ -1.14
SREBF2-208ENST00000491541 DEFB104AQ8WTQ1 72 aa7.91□□□□□ -1.14
SREBF2-208ENST00000491541 DOPEY1Q5JWR5 2465 aa7.91□□□□□ -1.14
SREBF2-208ENST00000491541 ANKRD11Q6UB99 2663 aaPredicted RBP7.9□□□□□ -1.14
SREBF2-208ENST00000491541 XGP55808 180 aa7.9□□□□□ -1.14
SREBF2-208ENST00000491541 C9orf106Q8NAJ2 232 aa7.9□□□□□ -1.14
SREBF2-208ENST00000491541 ZNRF2Q8NHG8 242 aa7.9□□□□□ -1.14
SREBF2-208ENST00000491541 J3KRW8 73 aa7.9□□□□□ -1.14
SREBF2-208ENST00000491541 NFE4Q86UQ8 179 aa7.9□□□□□ -1.14
SREBF2-208ENST00000491541 ITLN2Q8WWU7 325 aaPredicted RBP7.9□□□□□ -1.14
SREBF2-208ENST00000491541 ZFAND3Q9H8U3 227 aa7.9□□□□□ -1.14
SREBF2-208ENST00000491541 HIVEP3Q5T1R4 2406 aa7.9□□□□□ -1.15
SREBF2-208ENST00000491541 USP9YO00507 2555 aaPredicted RBP7.9□□□□□ -1.15
SREBF2-208ENST00000491541 TRBV7-7A0A0K0K1E9 115 aa7.9□□□□□ -1.15
SREBF2-208ENST00000491541 MAPKAPK5-AS1Q8N8E1 139 aa7.9□□□□□ -1.15
SREBF2-208ENST00000491541 EFNA4P52798 201 aa7.89□□□□□ -1.15
SREBF2-208ENST00000491541 GAGE2BQ13066 116 aa7.89□□□□□ -1.15
SREBF2-208ENST00000491541 GAGE2EQ4V326 116 aa7.89□□□□□ -1.15
SREBF2-208ENST00000491541 GAGE2DQ9UEU5 116 aa7.89□□□□□ -1.15
SREBF2-208ENST00000491541 RAXQ9Y2V3 346 aa7.89□□□□□ -1.15
SREBF2-208ENST00000491541 KIF25-AS1Q9Y6Z4 181 aa7.89□□□□□ -1.15
SREBF2-208ENST00000491541 A0A0B4J2C4 111 aa7.89□□□□□ -1.15
SREBF2-208ENST00000491541 TRBV6-5A0A0K0K1A5 114 aa7.89□□□□□ -1.15
SREBF2-208ENST00000491541 CDX4O14627 284 aaPredicted RBP7.89□□□□□ -1.15
SREBF2-208ENST00000491541 TNFRSF6BO95407 300 aa7.89□□□□□ -1.15
SREBF2-208ENST00000491541 DSPP15924 2871 aaKnown RBP7.89□□□□□ -1.15
SREBF2-208ENST00000491541 A8MWV9 139 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms