RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 MT-ND4LP03901 98 aa15.8■□□□□ 0.12
VCPKMT-204ENST00000491402 FAM159AQ6UWV7 190 aa15.8■□□□□ 0.12
VCPKMT-204ENST00000491402 RPP21Q9H633 154 aaKnown RBP15.8■□□□□ 0.12
VCPKMT-204ENST00000491402 V9GYV3 84 aa15.8■□□□□ 0.12
VCPKMT-204ENST00000491402 IGHV3OR16-12A0A075B7B8 117 aa15.8■□□□□ 0.12
VCPKMT-204ENST00000491402 GATCO43716 136 aaKnown RBP15.8■□□□□ 0.12
VCPKMT-204ENST00000491402 DEFB135Q30KP9 77 aa15.8■□□□□ 0.12
VCPKMT-204ENST00000491402 ANXA2RQ3ZCQ2 193 aa15.8■□□□□ 0.12
VCPKMT-204ENST00000491402 OR2D3Q8NGH3 330 aa15.8■□□□□ 0.12
VCPKMT-204ENST00000491402 LINC01587Q99440 93 aa15.8■□□□□ 0.12
VCPKMT-204ENST00000491402 PYGO2Q9BRQ0 406 aa15.8■□□□□ 0.12
VCPKMT-204ENST00000491402 GOLT1BQ9Y3E0 138 aa15.8■□□□□ 0.12
VCPKMT-204ENST00000491402 PRKDCP78527 4128 aaKnown RBP15.79■□□□□ 0.12
VCPKMT-204ENST00000491402 IGHV1OR15-1A0A075B7D0 117 aa15.79■□□□□ 0.12
VCPKMT-204ENST00000491402 TMEM189A5PLL7 270 aa15.79■□□□□ 0.12
VCPKMT-204ENST00000491402 TDRG1Q3Y452 100 aa15.79■□□□□ 0.12
VCPKMT-204ENST00000491402 ZNF705AQ6ZN79 300 aaPredicted RBP15.79■□□□□ 0.12
VCPKMT-204ENST00000491402 ANAPC16Q96DE5 110 aa15.79■□□□□ 0.12
VCPKMT-204ENST00000491402 NBEAL2Q6ZNJ1 2754 aa15.79■□□□□ 0.12
VCPKMT-204ENST00000491402 TMSB15BA0A087X1C1 80 aa15.78■□□□□ 0.12
VCPKMT-204ENST00000491402 PPP1R2P9O14990 202 aa15.78■□□□□ 0.12
VCPKMT-204ENST00000491402 RPS10P5Q9NQ39 176 aa15.78■□□□□ 0.12
VCPKMT-204ENST00000491402 HTN1P15515 57 aa15.77■□□□□ 0.12
VCPKMT-204ENST00000491402 ATRAIDQ6UW56 229 aa15.77■□□□□ 0.12
VCPKMT-204ENST00000491402 Q6ZWC4 215 aa15.77■□□□□ 0.12
VCPKMT-204ENST00000491402 ZNF575Q86XF7 245 aa15.77■□□□□ 0.12
VCPKMT-204ENST00000491402 KCNS1Q96KK3 526 aa15.77■□□□□ 0.12
VCPKMT-204ENST00000491402 CT83Q5H943 113 aa15.77■□□□□ 0.11
VCPKMT-204ENST00000491402 PRM2P04554 102 aa15.76■□□□□ 0.11
VCPKMT-204ENST00000491402 LINC00467Q9BRT7 94 aa15.76■□□□□ 0.11
VCPKMT-204ENST00000491402 A0A087WWC5 75 aa15.75■□□□□ 0.11
VCPKMT-204ENST00000491402 RCHY1Q96PM5 261 aa15.75■□□□□ 0.11
VCPKMT-204ENST00000491402 CTDSP1Q9GZU7 261 aa15.75■□□□□ 0.11
VCPKMT-204ENST00000491402 TP53TG3Q9ULZ0 132 aa15.75■□□□□ 0.11
VCPKMT-204ENST00000491402 CBY3A6NI87 242 aa15.75■□□□□ 0.11
VCPKMT-204ENST00000491402 GNRH2O43555 120 aa15.75■□□□□ 0.11
VCPKMT-204ENST00000491402 TYMSP04818 313 aa15.75■□□□□ 0.11
VCPKMT-204ENST00000491402 GZMBP10144 247 aa15.75■□□□□ 0.11
VCPKMT-204ENST00000491402 SBSPONQ8IVN8 264 aa15.75■□□□□ 0.11
VCPKMT-204ENST00000491402 XKRY2A2RUG3 117 aa15.74■□□□□ 0.11
VCPKMT-204ENST00000491402 GRIFINA4D1Z8 144 aa15.74■□□□□ 0.11
VCPKMT-204ENST00000491402 A8MWL6 223 aa15.74■□□□□ 0.11
VCPKMT-204ENST00000491402 RPS20P60866 119 aaKnown RBP15.74■□□□□ 0.11
VCPKMT-204ENST00000491402 TSKUQ8WUA8 353 aa15.73■□□□□ 0.11
VCPKMT-204ENST00000491402 RNF183Q96D59 192 aa15.73■□□□□ 0.11
VCPKMT-204ENST00000491402 B9D2Q9BPU9 175 aa15.73■□□□□ 0.11
VCPKMT-204ENST00000491402 TMEM242Q9NWH2 141 aa15.73■□□□□ 0.11
VCPKMT-204ENST00000491402 CXCL1P09341 107 aa15.72■□□□□ 0.11
VCPKMT-204ENST00000491402 X6R8D5 127 aa15.72■□□□□ 0.11
VCPKMT-204ENST00000491402 TGP01266 2768 aa15.72■□□□□ 0.11
VCPKMT-204ENST00000491402 TRGV11A0A075B6L2 103 aa15.71■□□□□ 0.11
VCPKMT-204ENST00000491402 AZU1P20160 251 aa15.71■□□□□ 0.11
VCPKMT-204ENST00000491402 ASIPP42127 132 aa15.71■□□□□ 0.11
VCPKMT-204ENST00000491402 GTSF1Q8WW33 167 aa15.71■□□□□ 0.11
VCPKMT-204ENST00000491402 NEU1Q99519 415 aa15.71■□□□□ 0.11
VCPKMT-204ENST00000491402 IGHV3-16A0A0C4DH30 117 aa15.7■□□□□ 0.1
VCPKMT-204ENST00000491402 SPRY2O43597 315 aa15.7■□□□□ 0.1
VCPKMT-204ENST00000491402 OR11H2Q8NH07 326 aa15.7■□□□□ 0.1
VCPKMT-204ENST00000491402 GFRA4Q9GZZ7 299 aa15.7■□□□□ 0.1
VCPKMT-204ENST00000491402 IL36BQ9NZH7 164 aa15.7■□□□□ 0.1
VCPKMT-204ENST00000491402 MDFICQ9P1T7 246 aa15.7■□□□□ 0.1
VCPKMT-204ENST00000491402 TP53TG1Q9Y2A0 90 aa15.7■□□□□ 0.1
VCPKMT-204ENST00000491402 COL7A1Q02388 2944 aa15.7■□□□□ 0.1
VCPKMT-204ENST00000491402 SMIM27A0A1W2PRY6 76 aa15.7■□□□□ 0.1
VCPKMT-204ENST00000491402 S100A4P26447 101 aaKnown RBP15.7■□□□□ 0.1
VCPKMT-204ENST00000491402 TCL1AP56279 114 aa15.7■□□□□ 0.1
VCPKMT-204ENST00000491402 RRN3P1Q2M238 152 aa15.7■□□□□ 0.1
VCPKMT-204ENST00000491402 DNLZQ5SXM8 178 aa15.7■□□□□ 0.1
VCPKMT-204ENST00000491402 RNASE8Q8TDE3 154 aaKnown RBP15.7■□□□□ 0.1
VCPKMT-204ENST00000491402 FAM231BA6NCW3 169 aa15.69■□□□□ 0.1
VCPKMT-204ENST00000491402 HIGD1CA8MV81 97 aa15.69■□□□□ 0.1
VCPKMT-204ENST00000491402 IGLC6P0CF74 106 aa15.69■□□□□ 0.1
VCPKMT-204ENST00000491402 RNASE3P12724 160 aaKnown RBP15.69■□□□□ 0.1
VCPKMT-204ENST00000491402 TMEM263Q8WUH6 116 aaKnown RBP15.69■□□□□ 0.1
VCPKMT-204ENST00000491402 OVOL2Q9BRP0 275 aa15.69■□□□□ 0.1
VCPKMT-204ENST00000491402 H3BVH4 76 aa15.68■□□□□ 0.1
VCPKMT-204ENST00000491402 FER1L6-AS1Q8NA97 138 aa15.68■□□□□ 0.1
VCPKMT-204ENST00000491402 C11orf72Q8NBR9 251 aa15.68■□□□□ 0.1
VCPKMT-204ENST00000491402 TPPP3Q9BW30 176 aa15.68■□□□□ 0.1
VCPKMT-204ENST00000491402 RETNQ9HD89 108 aa15.68■□□□□ 0.1
VCPKMT-204ENST00000491402 SMIM9A6NGZ8 99 aa15.67■□□□□ 0.1
VCPKMT-204ENST00000491402 FOXA3P55318 350 aaPredicted RBP15.67■□□□□ 0.1
VCPKMT-204ENST00000491402 A0A1W2PPQ1 181 aa15.67■□□□□ 0.1
VCPKMT-204ENST00000491402 ARMS2P0C7Q2 107 aa15.67■□□□□ 0.1
VCPKMT-204ENST00000491402 C16orf74Q96GX8 76 aa15.67■□□□□ 0.1
VCPKMT-204ENST00000491402 IMMP2LQ96T52 175 aa15.67■□□□□ 0.1
VCPKMT-204ENST00000491402 NAT8BQ9UHF3 227 aa15.67■□□□□ 0.1
VCPKMT-204ENST00000491402 MUC4Q99102 2169 aa15.66■□□□□ 0.1
VCPKMT-204ENST00000491402 ZNF415Q09FC8 603 aa15.66■□□□□ 0.1
VCPKMT-204ENST00000491402 TM2D3Q9BRN9 247 aa15.66■□□□□ 0.1
VCPKMT-204ENST00000491402 SSBP4Q9BWG4 385 aaPredicted RBP15.66■□□□□ 0.1
VCPKMT-204ENST00000491402 GSN-AS1Q9NRJ2 163 aa15.66■□□□□ 0.1
VCPKMT-204ENST00000491402 TIMM8BQ9Y5J9 83 aaPredicted RBP15.66■□□□□ 0.1
VCPKMT-204ENST00000491402 TENM3Q9P273 2699 aa15.65■□□□□ 0.1
VCPKMT-204ENST00000491402 DNAH9Q9NYC9 4486 aa15.65■□□□□ 0.1
VCPKMT-204ENST00000491402 CXorf65A6NEN9 183 aa15.65■□□□□ 0.1
VCPKMT-204ENST00000491402 OR5AL1P0C617 328 aa15.65■□□□□ 0.1
VCPKMT-204ENST00000491402 MED14OSP0DP75 135 aa15.65■□□□□ 0.1
VCPKMT-204ENST00000491402 FAM3BP58499 235 aaPredicted RBP15.65■□□□□ 0.1
VCPKMT-204ENST00000491402 ZNF493Q6ZR52 646 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms