RNA–Protein interactions for RNA: ENST00000490866.2

SYNE1-229, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 2

Gene SYNE1, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-229ENST00000490866 TRAV8-1A0A0A6YYK1 113 aa5.15□□□□□ -1.59
SYNE1-229ENST00000490866 PRAC2D3DTV9 90 aa5.15□□□□□ -1.59
SYNE1-229ENST00000490866 INSP01308 110 aa5.15□□□□□ -1.59
SYNE1-229ENST00000490866 MT-ND6P03923 174 aa5.15□□□□□ -1.59
SYNE1-229ENST00000490866 ERCC8Q13216 396 aa5.15□□□□□ -1.59
SYNE1-229ENST00000490866 RIGQ13278 110 aa5.15□□□□□ -1.59
SYNE1-229ENST00000490866 OR5I1Q13606 314 aa5.15□□□□□ -1.59
SYNE1-229ENST00000490866 TRPT1Q86TN4 253 aaKnown RBP5.15□□□□□ -1.59
SYNE1-229ENST00000490866 LURAP1LQ8IV03 231 aa5.15□□□□□ -1.59
SYNE1-229ENST00000490866 OR2D3Q8NGH3 330 aa5.15□□□□□ -1.59
SYNE1-229ENST00000490866 PTH2Q96A98 100 aa5.15□□□□□ -1.59
SYNE1-229ENST00000490866 ZC2HC1AQ96GY0 325 aa5.15□□□□□ -1.59
SYNE1-229ENST00000490866 GOLT1BQ9Y3E0 138 aa5.15□□□□□ -1.59
SYNE1-229ENST00000490866 STAB1Q9NY15 2570 aa5.14□□□□□ -1.59
SYNE1-229ENST00000490866 NOTCH3Q9UM47 2321 aa5.14□□□□□ -1.59
SYNE1-229ENST00000490866 IZUMO1RA6ND01 250 aa5.14□□□□□ -1.59
SYNE1-229ENST00000490866 K7EN84 100 aa5.14□□□□□ -1.59
SYNE1-229ENST00000490866 ZNF324O75467 553 aaPredicted RBP5.14□□□□□ -1.59
SYNE1-229ENST00000490866 OR5AL1P0C617 328 aa5.14□□□□□ -1.59
SYNE1-229ENST00000490866 IGLL1P15814 213 aa5.14□□□□□ -1.59
SYNE1-229ENST00000490866 S100A4P26447 101 aaKnown RBP5.14□□□□□ -1.59
SYNE1-229ENST00000490866 HLA-DMBP28068 263 aa5.14□□□□□ -1.59
SYNE1-229ENST00000490866 RNASE4P34096 147 aaKnown RBP5.14□□□□□ -1.59
SYNE1-229ENST00000490866 FAM3BP58499 235 aaPredicted RBP5.14□□□□□ -1.59
SYNE1-229ENST00000490866 ODF3L2Q3SX64 289 aa5.14□□□□□ -1.59
SYNE1-229ENST00000490866 ANXA2RQ3ZCQ2 193 aa5.14□□□□□ -1.59
SYNE1-229ENST00000490866 PRR27Q6MZM9 219 aa5.14□□□□□ -1.59
SYNE1-229ENST00000490866 ZFAND2AQ8N6M9 145 aa5.14□□□□□ -1.59
SYNE1-229ENST00000490866 SPXQ9BT56 116 aa5.14□□□□□ -1.59
SYNE1-229ENST00000490866 TMEM208Q9BTX3 173 aa5.14□□□□□ -1.59
SYNE1-229ENST00000490866 V9GYV3 84 aa5.14□□□□□ -1.59
SYNE1-229ENST00000490866 IGHV4-4A0A075B6R2 117 aa5.13□□□□□ -1.59
SYNE1-229ENST00000490866 IGHV1OR15-1A0A075B7D0 117 aa5.13□□□□□ -1.59
SYNE1-229ENST00000490866 A0A1B0GUT8 65 aa5.13□□□□□ -1.59
SYNE1-229ENST00000490866 SH2D1AO60880 128 aa5.13□□□□□ -1.59
SYNE1-229ENST00000490866 PPP1R17O96001 155 aa5.13□□□□□ -1.59
SYNE1-229ENST00000490866 TYMSP04818 313 aa5.13□□□□□ -1.59
SYNE1-229ENST00000490866 EDN2P20800 178 aa5.13□□□□□ -1.59
SYNE1-229ENST00000490866 ASIPP42127 132 aa5.13□□□□□ -1.59
SYNE1-229ENST00000490866 AMTNQ6UX39 209 aa5.13□□□□□ -1.59
SYNE1-229ENST00000490866 Q6ZWC4 215 aa5.13□□□□□ -1.59
SYNE1-229ENST00000490866 SYT8Q8NBV8 401 aa5.13□□□□□ -1.59
SYNE1-229ENST00000490866 SGK494Q96LW2 274 aa5.13□□□□□ -1.59
SYNE1-229ENST00000490866 LINC01587Q99440 93 aa5.13□□□□□ -1.59
SYNE1-229ENST00000490866 NEU1Q99519 415 aa5.13□□□□□ -1.59
SYNE1-229ENST00000490866 GNB1LQ9BYB4 327 aa5.13□□□□□ -1.59
SYNE1-229ENST00000490866 RNASE7Q9H1E1 156 aaKnown RBP5.13□□□□□ -1.59
SYNE1-229ENST00000490866 TEX48A0A1B0GUV7 120 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 PGPEP1LA6NFU8 196 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 HIGD1CA8MV81 97 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 F6UB75 175 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 CD7P09564 240 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 CRIP1P50238 77 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 BTN1A1Q13410 526 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 ELOBQ15370 118 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 LGALS9BQ3B8N2 356 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 FAM24BQ8N5W8 94 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 FER1L6-AS1Q8NA97 138 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 NHLRC2Q8NBF2 726 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 Q8TAT8 98 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 FAM210BQ96KR6 192 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 C8orf49Q96NF6 230 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 CNFNQ9BYD5 112 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 SRD5A3Q9H8P0 318 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 TP53TG1Q9Y2A0 90 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 PHLDA3Q9Y5J5 127 aa5.12□□□□□ -1.59
SYNE1-229ENST00000490866 TRAV12-3A0A0B4J271 114 aa5.11□□□□□ -1.59
SYNE1-229ENST00000490866 CBY3A6NI87 242 aa5.11□□□□□ -1.59
SYNE1-229ENST00000490866 KNCNA6PVL3 124 aa5.11□□□□□ -1.59
SYNE1-229ENST00000490866 HLA-DQA1P01909 254 aa5.11□□□□□ -1.59
SYNE1-229ENST00000490866 PPBPP02775 128 aa5.11□□□□□ -1.59
SYNE1-229ENST00000490866 TRGC1P0CF51 173 aa5.11□□□□□ -1.59
SYNE1-229ENST00000490866 ZNF705DP0CH99 300 aaPredicted RBP5.11□□□□□ -1.59
SYNE1-229ENST00000490866 ZNF705BP0CI00 300 aaPredicted RBP5.11□□□□□ -1.59
SYNE1-229ENST00000490866 SPINK13Q1W4C9 94 aa5.11□□□□□ -1.59
SYNE1-229ENST00000490866 KPRPQ5T749 579 aaPredicted RBP5.11□□□□□ -1.59
SYNE1-229ENST00000490866 GDF5OSQ5U4N7 250 aa5.11□□□□□ -1.59
SYNE1-229ENST00000490866 GFI1BQ5VTD9 330 aa5.11□□□□□ -1.59
SYNE1-229ENST00000490866 ZFP82Q8N141 532 aa5.11□□□□□ -1.59
SYNE1-229ENST00000490866 Q8N1Y9 231 aa5.11□□□□□ -1.59
SYNE1-229ENST00000490866 NUP35Q8NFH5 326 aa5.11□□□□□ -1.59
SYNE1-229ENST00000490866 C16orf74Q96GX8 76 aa5.11□□□□□ -1.59
SYNE1-229ENST00000490866 AURKAIP1Q9NWT8 199 aaPredicted RBP5.11□□□□□ -1.59
SYNE1-229ENST00000490866 AGRNO00468 2067 aa5.11□□□□□ -1.59
SYNE1-229ENST00000490866 VWFP04275 2813 aa5.1□□□□□ -1.59
SYNE1-229ENST00000490866 SNAI2O43623 268 aa5.1□□□□□ -1.59
SYNE1-229ENST00000490866 IGKV3-20P01619 116 aa5.1□□□□□ -1.59
SYNE1-229ENST00000490866 SMIM17P0DL12 118 aa5.1□□□□□ -1.59
SYNE1-229ENST00000490866 RAB5AP20339 215 aa5.1□□□□□ -1.59
SYNE1-229ENST00000490866 CTRLP40313 264 aa5.1□□□□□ -1.59
SYNE1-229ENST00000490866 ZNF80P51504 273 aaPredicted RBP5.1□□□□□ -1.59
SYNE1-229ENST00000490866 HBBP68871 147 aa5.1□□□□□ -1.59
SYNE1-229ENST00000490866 ZNF415Q09FC8 603 aa5.1□□□□□ -1.59
SYNE1-229ENST00000490866 RRN3P1Q2M238 152 aa5.1□□□□□ -1.59
SYNE1-229ENST00000490866 SPANXN1Q5VSR9 72 aa5.1□□□□□ -1.59
SYNE1-229ENST00000490866 TMEM263Q8WUH6 116 aaKnown RBP5.1□□□□□ -1.59
SYNE1-229ENST00000490866 NAGKQ9UJ70 344 aa5.1□□□□□ -1.59
SYNE1-229ENST00000490866 LAMTOR2Q9Y2Q5 125 aa5.1□□□□□ -1.59
SYNE1-229ENST00000490866 IGKV3D-20A0A0C4DH25 116 aa5.09□□□□□ -1.59
SYNE1-229ENST00000490866 COLCA2A8K830 154 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms