RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 CCL8P80075 99 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 SLC38A11Q08AI6 406 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 FUT5Q11128 374 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 IL15RAQ13261 267 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 CIRBPQ14011 172 aaKnown RBP1.41□□□□□ -2.18
HMGN1-218ENST00000490032 ATXN8Q156A1 80 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 CST6Q15828 149 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 TNXAQ16473 311 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 RRN3P1Q2M238 152 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 LGALS9BQ3B8N2 356 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 NMSQ5H8A3 153 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 DMRTC1Q5HYR2 192 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 SPANXN5Q5MJ07 72 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 C1orf195Q5TG92 126 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 LGALS9CQ6DKI2 356 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 GLIPR1L1Q6UWM5 242 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 MRPL55Q7Z7F7 128 aaKnown RBP1.41□□□□□ -2.18
HMGN1-218ENST00000490032 LINC00596Q86U02 117 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 TEN1Q86WV5 123 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 ARL17AQ8IVW1 177 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 AMN1Q8IY45 258 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 CLECL1Q8IZS7 167 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 TMEM123Q8N131 208 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 TMEM256Q8N2U0 113 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 C3orf22Q8N5N4 141 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 C2orf73Q8N5S3 287 aaPredicted RBP1.41□□□□□ -2.18
HMGN1-218ENST00000490032 TMEM105Q8N8V8 129 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 C8orf31Q8N9H6 132 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 ZIC4Q8N9L1 334 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 MORN4Q8NDC4 146 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 OR8A1Q8NGG7 326 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 OTOSQ8NHW6 89 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 LINC01560Q8TB33 94 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 NT5CQ8TCD5 201 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 DYNLRB2Q8TF09 96 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 TSKUQ8WUA8 353 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 TMEM54Q969K7 222 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 CLDN23Q96B33 292 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 PLEKHB2Q96CS7 222 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 PGLYRP3Q96LB9 341 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 PDCD1LG2Q9BQ51 273 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 SFXN3Q9BWM7 321 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 TMEM222Q9H0R3 208 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 FBXL15Q9H469 300 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 NXT2Q9NPJ8 142 aaKnown RBP1.41□□□□□ -2.18
HMGN1-218ENST00000490032 TAS2R4Q9NYW5 299 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 NXT1Q9UKK6 140 aaKnown RBP1.41□□□□□ -2.18
HMGN1-218ENST00000490032 ZNF443Q9Y2A4 671 aaPredicted RBP1.41□□□□□ -2.18
HMGN1-218ENST00000490032 AMMECR1Q9Y4X0 333 aaPredicted RBP1.41□□□□□ -2.18
HMGN1-218ENST00000490032 CSDC2Q9Y534 153 aaKnown RBP1.41□□□□□ -2.18
HMGN1-218ENST00000490032 INSIG2Q9Y5U4 225 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 CHCHD2Q9Y6H1 151 aaPredicted RBP1.41□□□□□ -2.18
HMGN1-218ENST00000490032 R4GMQ9 66 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 HLA-DRB4X5D2U9 266 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 FASNP49327 2511 aaKnown RBP1.41□□□□□ -2.18
HMGN1-218ENST00000490032 COL4A6Q14031 1691 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 LOC285556D6RIA3 1793 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 PLXNA3P51805 1871 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 RALGAPA2Q2PPJ7 1873 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 SPTBN4Q9H254 2564 aa1.41□□□□□ -2.18
HMGN1-218ENST00000490032 DOCK3Q8IZD9 2030 aa1.4□□□□□ -2.18
HMGN1-218ENST00000490032 MYO9BQ13459 2157 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 DOCK11Q5JSL3 2073 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 SMIM26A0A096LP01 95 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 MYMXA0A1B0GTQ4 84 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 FAM240AA0A1B0GVK7 77 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 KNCNA6PVL3 124 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 F2Z2F3 143 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 F5H768 121 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 LINC01619G3V211 115 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 M0R2P5 195 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 BPY2O14599 106 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 FFAR1O14842 300 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 EPPINO95925 133 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 P01737 135 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 IGHV3-7P01780 117 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 RPL7P18124 248 aaKnown RBP1.4□□□□□ -2.19
HMGN1-218ENST00000490032 HLA-DMBP28068 263 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 SRIP30626 198 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 PPP1CCP36873 323 aaKnown RBP1.4□□□□□ -2.19
HMGN1-218ENST00000490032 ZNF83P51522 516 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 RBM11P57052 281 aaKnown RBP1.4□□□□□ -2.19
HMGN1-218ENST00000490032 NPC2P61916 151 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 PPP1CAP62136 330 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 RPS15AP62244 130 aaKnown RBP1.4□□□□□ -2.19
HMGN1-218ENST00000490032 HBBP68871 147 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 DEFB103AP81534 67 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 ERHP84090 104 aaKnown RBP1.4□□□□□ -2.19
HMGN1-218ENST00000490032 SP4Q02446 784 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 PDE6HQ13956 83 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 GUSBP1Q15486 140 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 ALKBH6Q3KRA9 238 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 SPATA31B1PQ5VZV4 182 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 SCGB1D4Q6XE38 83 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 Q6ZUT4 128 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 FAM231DQ6ZW35 169 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 RPS27LQ71UM5 84 aaKnown RBP1.4□□□□□ -2.19
HMGN1-218ENST00000490032 LINC00643Q86TS7 51 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 MSRB3Q8IXL7 192 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 Q8IYB0 196 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms