RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 IGHV3-30P01768 117 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 IGHV3-33P01772 117 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 PLA2G1BP04054 148 aaKnown RBP8.61□□□□□ -1.03
LTA-216ENST00000489638 TYMSP04818 313 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 IGHV3-30-3P0DP02 117 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 IGHV3-30-5P0DP03 117 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 WFDC2Q14508 124 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 LINC00528Q8N1L1 170 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 TMED6Q8WW62 240 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 HYLS1Q96M11 299 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 RPH3ALQ9UNE2 315 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 HMCN2Q8NDA2 5059 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 FBLL1A6NHQ2 334 aaKnown RBP8.61□□□□□ -1.03
LTA-216ENST00000489638 C17orf112F2Z3M2 114 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 F6UZH7 168 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 LRRC37A5PQ49AS3 106 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 KHDC3LQ587J8 217 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 SDF2L1Q9HCN8 221 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 OR5AC2Q9NZP5 309 aa8.61□□□□□ -1.03
LTA-216ENST00000489638 TRAV21A0A0B4J279 112 aa8.6□□□□□ -1.03
LTA-216ENST00000489638 SIX6O95475 246 aa8.6□□□□□ -1.03
LTA-216ENST00000489638 PFN1P07737 140 aaKnown RBP8.6□□□□□ -1.03
LTA-216ENST00000489638 RHOHQ15669 191 aa8.6□□□□□ -1.03
LTA-216ENST00000489638 FFAR4Q5NUL3 377 aa8.6□□□□□ -1.03
LTA-216ENST00000489638 SLC25A29Q8N8R3 303 aa8.6□□□□□ -1.03
LTA-216ENST00000489638 ATP5SQ99766 215 aa8.6□□□□□ -1.03
LTA-216ENST00000489638 OTORQ9NRC9 128 aa8.6□□□□□ -1.03
LTA-216ENST00000489638 BOLA1Q9Y3E2 137 aa8.6□□□□□ -1.03
LTA-216ENST00000489638 FAM240BA0A1B0GVZ2 78 aa8.59□□□□□ -1.03
LTA-216ENST00000489638 EIF3GO75821 320 aaKnown RBP eCLIP8.59□□□□□ -1.03
LTA-216ENST00000489638 TAS2R45P59539 299 aa8.59□□□□□ -1.03
LTA-216ENST00000489638 LAGE3Q14657 143 aa8.59□□□□□ -1.03
LTA-216ENST00000489638 LELP1Q5T871 98 aa8.59□□□□□ -1.03
LTA-216ENST00000489638 GOLT1AQ6ZVE7 132 aa8.59□□□□□ -1.03
LTA-216ENST00000489638 CMTM2Q8TAZ6 248 aa8.59□□□□□ -1.03
LTA-216ENST00000489638 DEFB104AQ8WTQ1 72 aa8.59□□□□□ -1.03
LTA-216ENST00000489638 PRADC1Q9BSG0 188 aa8.59□□□□□ -1.03
LTA-216ENST00000489638 TRAV8-1A0A0A6YYK1 113 aa8.58□□□□□ -1.04
LTA-216ENST00000489638 PGPA6NDG6 321 aa8.58□□□□□ -1.04
LTA-216ENST00000489638 H0YIZ8 118 aa8.58□□□□□ -1.04
LTA-216ENST00000489638 ASB13Q8WXK3 278 aa8.58□□□□□ -1.04
LTA-216ENST00000489638 TVP23CQ96ET8 276 aa8.58□□□□□ -1.04
LTA-216ENST00000489638 KCNS1Q96KK3 526 aa8.58□□□□□ -1.04
LTA-216ENST00000489638 TM2D2Q9BX73 214 aa8.58□□□□□ -1.04
LTA-216ENST00000489638 TREM1Q9NP99 234 aa8.58□□□□□ -1.04
LTA-216ENST00000489638 IGHV3-73A0A0B4J1V6 119 aa8.57□□□□□ -1.04
LTA-216ENST00000489638 TRBV6-4A0A1B0GX49 114 aa8.57□□□□□ -1.04
LTA-216ENST00000489638 ZNF876PQ49A33 203 aa8.57□□□□□ -1.04
LTA-216ENST00000489638 FAM74A1Q5RGS3 127 aa8.57□□□□□ -1.04
LTA-216ENST00000489638 CFAP126Q5VTH2 177 aa8.57□□□□□ -1.04
LTA-216ENST00000489638 Q8N3U1 123 aa8.57□□□□□ -1.04
LTA-216ENST00000489638 CCDC32Q9BV29 185 aa8.57□□□□□ -1.04
LTA-216ENST00000489638 NMES1Q9C002 83 aa8.57□□□□□ -1.04
LTA-216ENST00000489638 LECT2O14960 151 aa8.56□□□□□ -1.04
LTA-216ENST00000489638 RS1O15537 224 aa8.56□□□□□ -1.04
LTA-216ENST00000489638 GNG5P63218 68 aa8.56□□□□□ -1.04
LTA-216ENST00000489638 DPPA3Q6W0C5 159 aa8.56□□□□□ -1.04
LTA-216ENST00000489638 GTSF1LQ9H1H1 148 aa8.56□□□□□ -1.04
LTA-216ENST00000489638 MBD2Q9UBB5 411 aa8.56□□□□□ -1.04
LTA-216ENST00000489638 LRP1Q07954 4544 aaKnown RBP8.56□□□□□ -1.04
LTA-216ENST00000489638 UBR4Q5T4S7 5183 aa8.55□□□□□ -1.04
LTA-216ENST00000489638 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.55□□□□□ -1.04
LTA-216ENST00000489638 CIDEAO60543 219 aa8.55□□□□□ -1.04
LTA-216ENST00000489638 KRTAP10-4P60372 401 aaPredicted RBP8.55□□□□□ -1.04
LTA-216ENST00000489638 SERTAD4-AS1Q5TG53 156 aa8.55□□□□□ -1.04
LTA-216ENST00000489638 MZT2BQ6NZ67 158 aa8.55□□□□□ -1.04
LTA-216ENST00000489638 SCXQ7RTU7 201 aa8.55□□□□□ -1.04
LTA-216ENST00000489638 ATP6V0E2Q8NHE4 81 aa8.55□□□□□ -1.04
LTA-216ENST00000489638 HSPB11Q9Y547 144 aa8.55□□□□□ -1.04
LTA-216ENST00000489638 ARL6IP6Q8N6S5 226 aa8.54□□□□□ -1.04
LTA-216ENST00000489638 SCGB1C1Q8TD33 95 aa8.54□□□□□ -1.04
LTA-216ENST00000489638 NDFIP1Q9BT67 221 aa8.54□□□□□ -1.04
LTA-216ENST00000489638 SMIM3Q9BZL3 60 aa8.54□□□□□ -1.04
LTA-216ENST00000489638 C11orf21Q9P2W6 132 aa8.54□□□□□ -1.04
LTA-216ENST00000489638 TRAV8-3A0A0A6YYJ7 113 aa8.53□□□□□ -1.04
LTA-216ENST00000489638 MGST1P10620 155 aaKnown RBP8.53□□□□□ -1.04
LTA-216ENST00000489638 CYCSP99999 105 aaKnown RBP8.53□□□□□ -1.04
LTA-216ENST00000489638 LINC01620Q4KN68 170 aa8.53□□□□□ -1.04
LTA-216ENST00000489638 ZNF506Q5JVG8 444 aa8.53□□□□□ -1.04
LTA-216ENST00000489638 PQLC2Q6ZP29 291 aa8.53□□□□□ -1.04
LTA-216ENST00000489638 TMEM75Q8N9X5 138 aa8.53□□□□□ -1.04
LTA-216ENST00000489638 SGK494Q96LW2 274 aa8.53□□□□□ -1.04
LTA-216ENST00000489638 C9orf85Q96MD7 179 aa8.53□□□□□ -1.04
LTA-216ENST00000489638 PGPEP1LA6NFU8 196 aa8.52□□□□□ -1.05
LTA-216ENST00000489638 LINC00694P0DN24 101 aa8.52□□□□□ -1.05
LTA-216ENST00000489638 ZNF80P51504 273 aaPredicted RBP8.52□□□□□ -1.05
LTA-216ENST00000489638 DAZ4Q86SG3 579 aaKnown RBP8.52□□□□□ -1.05
LTA-216ENST00000489638 SYT8Q8NBV8 401 aa8.52□□□□□ -1.05
LTA-216ENST00000489638 ENKURQ8TC29 256 aa8.52□□□□□ -1.05
LTA-216ENST00000489638 PPP1R1CQ8WVI7 109 aa8.52□□□□□ -1.05
LTA-216ENST00000489638 DAZ3Q9NR90 486 aaKnown RBP8.52□□□□□ -1.05
LTA-216ENST00000489638 A0A1W2PPV4 95 aa8.51□□□□□ -1.05
LTA-216ENST00000489638 GAGE12JA6NER3 117 aa8.51□□□□□ -1.05
LTA-216ENST00000489638 HMGB3O15347 200 aaKnown RBP8.51□□□□□ -1.05
LTA-216ENST00000489638 GCGP01275 180 aa8.51□□□□□ -1.05
LTA-216ENST00000489638 H2BFSP57053 126 aa8.51□□□□□ -1.05
LTA-216ENST00000489638 RAB2AP61019 212 aa8.51□□□□□ -1.05
LTA-216ENST00000489638 GAGE1Q13065 139 aa8.51□□□□□ -1.05
LTA-216ENST00000489638 GAGE4Q13068 117 aa8.51□□□□□ -1.05
LTA-216ENST00000489638 GAGE5Q13069 117 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms