RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 C8orf49Q96NF6 230 aa9.39□□□□□ -0.91
CCL28-202ENST00000489442 SDF2L1Q9HCN8 221 aa9.39□□□□□ -0.91
CCL28-202ENST00000489442 MRPL16Q9NX20 251 aaKnown RBP9.39□□□□□ -0.91
CCL28-202ENST00000489442 MDFICQ9P1T7 246 aa9.39□□□□□ -0.91
CCL28-202ENST00000489442 DNAH6Q9C0G6 4158 aa9.38□□□□□ -0.91
CCL28-202ENST00000489442 TRAV34A0A0B4J273 112 aa9.38□□□□□ -0.91
CCL28-202ENST00000489442 PEX7O00628 323 aa9.38□□□□□ -0.91
CCL28-202ENST00000489442 GCGP01275 180 aa9.38□□□□□ -0.91
CCL28-202ENST00000489442 H2AFB1P0C5Y9 115 aa9.38□□□□□ -0.91
CCL28-202ENST00000489442 HOXA5P20719 270 aa9.38□□□□□ -0.91
CCL28-202ENST00000489442 TDRG1Q3Y452 100 aa9.38□□□□□ -0.91
CCL28-202ENST00000489442 EIF5AL1Q6IS14 154 aaKnown RBP9.38□□□□□ -0.91
CCL28-202ENST00000489442 DPPA3Q6W0C5 159 aa9.38□□□□□ -0.91
CCL28-202ENST00000489442 AKAP14Q86UN6 197 aa9.38□□□□□ -0.91
CCL28-202ENST00000489442 HIST1H2BAQ96A08 127 aa9.38□□□□□ -0.91
CCL28-202ENST00000489442 LINC00479Q96M42 142 aa9.38□□□□□ -0.91
CCL28-202ENST00000489442 SPXQ9BT56 116 aa9.38□□□□□ -0.91
CCL28-202ENST00000489442 GNRH2O43555 120 aa9.37□□□□□ -0.91
CCL28-202ENST00000489442 IGLV2-11P01706 119 aa9.37□□□□□ -0.91
CCL28-202ENST00000489442 IGHV3-53P01767 116 aa9.37□□□□□ -0.91
CCL28-202ENST00000489442 CCL18P55774 89 aa9.37□□□□□ -0.91
CCL28-202ENST00000489442 MBD3L1Q8WWY6 194 aa9.37□□□□□ -0.91
CCL28-202ENST00000489442 C18orf15Q96N68 181 aa9.37□□□□□ -0.91
CCL28-202ENST00000489442 PAGE4O60829 102 aa9.36□□□□□ -0.91
CCL28-202ENST00000489442 C1QBP02746 253 aa9.36□□□□□ -0.91
CCL28-202ENST00000489442 PFN1P07737 140 aaKnown RBP9.36□□□□□ -0.91
CCL28-202ENST00000489442 UBE2G1P62253 170 aa9.36□□□□□ -0.91
CCL28-202ENST00000489442 LGALSLQ3ZCW2 172 aaPredicted RBP9.36□□□□□ -0.91
CCL28-202ENST00000489442 M0R2N4 97 aa9.35□□□□□ -0.91
CCL28-202ENST00000489442 TYMSP04818 313 aa9.35□□□□□ -0.91
CCL28-202ENST00000489442 ZNF80P51504 273 aaPredicted RBP9.35□□□□□ -0.91
CCL28-202ENST00000489442 TCEAL7Q9BRU2 100 aa9.35□□□□□ -0.91
CCL28-202ENST00000489442 ARL2-SNX15V9GYD0 113 aa9.35□□□□□ -0.91
CCL28-202ENST00000489442 IGLV2-18A0A075B6J9 118 aa9.34□□□□□ -0.91
CCL28-202ENST00000489442 TRGV4A0A0C4DH28 118 aa9.34□□□□□ -0.91
CCL28-202ENST00000489442 IGHV3-16A0A0C4DH30 117 aa9.34□□□□□ -0.91
CCL28-202ENST00000489442 H3BNG1 76 aa9.34□□□□□ -0.91
CCL28-202ENST00000489442 M0R2P5 195 aa9.34□□□□□ -0.91
CCL28-202ENST00000489442 RAB5CP51148 216 aa9.34□□□□□ -0.91
CCL28-202ENST00000489442 FAM3BP58499 235 aaPredicted RBP9.34□□□□□ -0.91
CCL28-202ENST00000489442 SLAQ13239 276 aa9.34□□□□□ -0.91
CCL28-202ENST00000489442 Q86TA4 180 aa9.34□□□□□ -0.91
CCL28-202ENST00000489442 RASL10AQ92737 203 aa9.34□□□□□ -0.91
CCL28-202ENST00000489442 FMC1Q96HJ9 113 aa9.34□□□□□ -0.91
CCL28-202ENST00000489442 FABP5P3A8MUU1 101 aa9.33□□□□□ -0.92
CCL28-202ENST00000489442 TEX46H3BTG2 121 aa9.33□□□□□ -0.92
CCL28-202ENST00000489442 PAX4O43316 350 aa9.33□□□□□ -0.92
CCL28-202ENST00000489442 AKR1C3P42330 323 aa9.33□□□□□ -0.92
CCL28-202ENST00000489442 SLC51BQ86UW2 128 aa9.33□□□□□ -0.92
CCL28-202ENST00000489442 HHLA3Q9XRX5 114 aa9.33□□□□□ -0.92
CCL28-202ENST00000489442 ZFP30Q9Y2G7 519 aa9.33□□□□□ -0.92
CCL28-202ENST00000489442 FRAS1Q86XX4 4008 aa9.33□□□□□ -0.92
CCL28-202ENST00000489442 EPPK1P58107 5090 aaKnown RBP9.33□□□□□ -0.92
CCL28-202ENST00000489442 C9JCJ5 164 aa9.32□□□□□ -0.92
CCL28-202ENST00000489442 SFTA3P0C7M3 94 aa9.32□□□□□ -0.92
CCL28-202ENST00000489442 OR4C5Q8NGB2 326 aa9.32□□□□□ -0.92
CCL28-202ENST00000489442 C11orf21Q9P2W6 132 aa9.32□□□□□ -0.92
CCL28-202ENST00000489442 PRO0255Q9UI72 69 aa9.32□□□□□ -0.92
CCL28-202ENST00000489442 DNAH10Q8IVF4 4471 aa9.32□□□□□ -0.92
CCL28-202ENST00000489442 ORM1P02763 201 aa9.31□□□□□ -0.92
CCL28-202ENST00000489442 S100A4P26447 101 aaKnown RBP9.31□□□□□ -0.92
CCL28-202ENST00000489442 VSIG2Q96IQ7 327 aa9.31□□□□□ -0.92
CCL28-202ENST00000489442 ZNF479Q96JC4 524 aa9.31□□□□□ -0.92
CCL28-202ENST00000489442 GNG13Q9P2W3 67 aa9.31□□□□□ -0.92
CCL28-202ENST00000489442 LINC00588Q9Y4M8 146 aa9.31□□□□□ -0.92
CCL28-202ENST00000489442 S100A9P06702 114 aaKnown RBP9.31□□□□□ -0.92
CCL28-202ENST00000489442 SULT1A2P50226 295 aa9.31□□□□□ -0.92
CCL28-202ENST00000489442 FHL2Q14192 279 aa9.31□□□□□ -0.92
CCL28-202ENST00000489442 ZNF876PQ49A33 203 aa9.31□□□□□ -0.92
CCL28-202ENST00000489442 ZC2HC1AQ96GY0 325 aa9.31□□□□□ -0.92
CCL28-202ENST00000489442 MANBALQ9NQG1 85 aa9.31□□□□□ -0.92
CCL28-202ENST00000489442 ICOSQ9Y6W8 199 aa9.31□□□□□ -0.92
CCL28-202ENST00000489442 A0A096LPF7 62 aa9.3□□□□□ -0.92
CCL28-202ENST00000489442 TRAV4A0A0B4J268 109 aa9.3□□□□□ -0.92
CCL28-202ENST00000489442 TRBV6-1A0A0K0K1D8 114 aa9.3□□□□□ -0.92
CCL28-202ENST00000489442 B4DEV8 164 aa9.3□□□□□ -0.92
CCL28-202ENST00000489442 CRYBA4P53673 196 aa9.3□□□□□ -0.92
CCL28-202ENST00000489442 FAM162BQ5T6X4 162 aa9.3□□□□□ -0.92
CCL28-202ENST00000489442 PCNPQ8WW12 178 aaKnown RBP9.3□□□□□ -0.92
CCL28-202ENST00000489442 TRAV1-1A0A0B4J248 108 aa9.29□□□□□ -0.92
CCL28-202ENST00000489442 SCO2A0A1W2PP80 73 aa9.29□□□□□ -0.92
CCL28-202ENST00000489442 M0R036 132 aa9.29□□□□□ -0.92
CCL28-202ENST00000489442 LTAP01374 205 aa9.29□□□□□ -0.92
CCL28-202ENST00000489442 ASIPP42127 132 aa9.29□□□□□ -0.92
CCL28-202ENST00000489442 CCL20P78556 96 aa9.29□□□□□ -0.92
CCL28-202ENST00000489442 MRPL23Q16540 153 aaKnown RBP9.29□□□□□ -0.92
CCL28-202ENST00000489442 ESRGQ1W209 222 aa9.29□□□□□ -0.92
CCL28-202ENST00000489442 SOHLH1Q5JUK2 328 aa9.29□□□□□ -0.92
CCL28-202ENST00000489442 ZNRF2Q8NHG8 242 aa9.29□□□□□ -0.92
CCL28-202ENST00000489442 IGKV3D-20A0A0C4DH25 116 aa9.28□□□□□ -0.92
CCL28-202ENST00000489442 SH2D1AO60880 128 aa9.28□□□□□ -0.92
CCL28-202ENST00000489442 IFNA1P01562 189 aa9.28□□□□□ -0.92
CCL28-202ENST00000489442 LINC00336Q6ZUF6 198 aa9.28□□□□□ -0.92
CCL28-202ENST00000489442 C9orf62Q8N4C0 152 aa9.28□□□□□ -0.92
CCL28-202ENST00000489442 NHLRC2Q8NBF2 726 aa9.28□□□□□ -0.92
CCL28-202ENST00000489442 C9orf85Q96MD7 179 aa9.28□□□□□ -0.92
CCL28-202ENST00000489442 Q9H8V8 135 aa9.28□□□□□ -0.92
CCL28-202ENST00000489442 LCE2BO14633 110 aa9.27□□□□□ -0.93
CCL28-202ENST00000489442 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.93
CCL28-202ENST00000489442 GYPEP15421 78 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms