RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 A0A0B4J2A0 478 aa5.86□□□□□ -1.47
SSBP1-212ENST00000489378 IGHV3-16A0A0C4DH30 117 aa5.86□□□□□ -1.47
SSBP1-212ENST00000489378 AKR1C4P17516 323 aa5.86□□□□□ -1.47
SSBP1-212ENST00000489378 FAAP20Q6NZ36 180 aa5.86□□□□□ -1.47
SSBP1-212ENST00000489378 CROCCP3Q8IVE0 287 aa5.86□□□□□ -1.47
SSBP1-212ENST00000489378 OR52I2Q8NH67 350 aa5.86□□□□□ -1.47
SSBP1-212ENST00000489378 BATF3Q9NR55 127 aa5.86□□□□□ -1.47
SSBP1-212ENST00000489378 SHPKQ9UHJ6 478 aa5.86□□□□□ -1.47
SSBP1-212ENST00000489378 PXMP4Q9Y6I8 212 aa5.86□□□□□ -1.47
SSBP1-212ENST00000489378 TRAV4A0A0B4J268 109 aa5.85□□□□□ -1.47
SSBP1-212ENST00000489378 SMCO3A2RU48 225 aa5.85□□□□□ -1.47
SSBP1-212ENST00000489378 M0R3E3 92 aa5.85□□□□□ -1.47
SSBP1-212ENST00000489378 PITX3O75364 302 aa5.85□□□□□ -1.47
SSBP1-212ENST00000489378 GPX1P07203 203 aa5.85□□□□□ -1.47
SSBP1-212ENST00000489378 IGLC2P0DOY2 106 aa5.85□□□□□ -1.47
SSBP1-212ENST00000489378 CRISP2P16562 243 aa5.85□□□□□ -1.47
SSBP1-212ENST00000489378 TBPP20226 339 aa5.85□□□□□ -1.47
SSBP1-212ENST00000489378 KRTAP10-8P60410 259 aa5.85□□□□□ -1.47
SSBP1-212ENST00000489378 LINC00305Q7Z4B0 112 aa5.85□□□□□ -1.47
SSBP1-212ENST00000489378 ZFAND2AQ8N6M9 145 aa5.85□□□□□ -1.47
SSBP1-212ENST00000489378 OR4C5Q8NGB2 326 aa5.85□□□□□ -1.47
SSBP1-212ENST00000489378 AGPAT4-IT1Q9H0P7 198 aa5.85□□□□□ -1.47
SSBP1-212ENST00000489378 COMMD3Q9UBI1 195 aa5.85□□□□□ -1.47
SSBP1-212ENST00000489378 IGKV2D-24A0A075B6R9 120 aa5.84□□□□□ -1.47
SSBP1-212ENST00000489378 A0A0D9SG52 128 aa5.84□□□□□ -1.47
SSBP1-212ENST00000489378 A0A0J9YXV3 536 aa5.84□□□□□ -1.47
SSBP1-212ENST00000489378 LOC105371267A0A1B0GV96 52 aa5.84□□□□□ -1.47
SSBP1-212ENST00000489378 RAB3DO95716 219 aa5.84□□□□□ -1.47
SSBP1-212ENST00000489378 PFN1P07737 140 aaKnown RBP5.84□□□□□ -1.47
SSBP1-212ENST00000489378 GATA1P15976 413 aaPredicted RBP5.84□□□□□ -1.47
SSBP1-212ENST00000489378 CDC34P49427 236 aaPredicted RBP5.84□□□□□ -1.47
SSBP1-212ENST00000489378 SEC61GP60059 68 aa5.84□□□□□ -1.47
SSBP1-212ENST00000489378 MUC21Q5SSG8 566 aa5.84□□□□□ -1.47
SSBP1-212ENST00000489378 BPIFA4PQ86YQ2 179 aa5.84□□□□□ -1.47
SSBP1-212ENST00000489378 HSD17B11Q8NBQ5 300 aa5.84□□□□□ -1.47
SSBP1-212ENST00000489378 CCDC59Q9P031 241 aaKnown RBP5.84□□□□□ -1.47
SSBP1-212ENST00000489378 MTFP1Q9UDX5 166 aa5.84□□□□□ -1.47
SSBP1-212ENST00000489378 COX11Q9Y6N1 276 aa5.84□□□□□ -1.47
SSBP1-212ENST00000489378 TRAV8-1A0A0A6YYK1 113 aa5.83□□□□□ -1.48
SSBP1-212ENST00000489378 CCDC160A6NGH7 325 aa5.83□□□□□ -1.48
SSBP1-212ENST00000489378 H3BP45 60 aa5.83□□□□□ -1.48
SSBP1-212ENST00000489378 SELENOTP62341 195 aa5.83□□□□□ -1.48
SSBP1-212ENST00000489378 S100A12P80511 92 aa5.83□□□□□ -1.48
SSBP1-212ENST00000489378 SPANXN5Q5MJ07 72 aa5.83□□□□□ -1.48
SSBP1-212ENST00000489378 S100A7AQ86SG5 101 aa5.83□□□□□ -1.48
SSBP1-212ENST00000489378 TMEM229BQ8NBD8 167 aa5.83□□□□□ -1.48
SSBP1-212ENST00000489378 LINC00477Q96M19 166 aa5.83□□□□□ -1.48
SSBP1-212ENST00000489378 RAB19A4D1S5 217 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 GGTLC3B5MD39 225 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 HPGDSO60760 199 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 SLC38A11Q08AI6 406 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 SURF2Q15527 256 aaPredicted RBP5.82□□□□□ -1.48
SSBP1-212ENST00000489378 FFAR4Q5NUL3 377 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 SLC25A29Q8N8R3 303 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 RMI2Q96E14 147 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 SDHCQ99643 169 aaPredicted RBP5.82□□□□□ -1.48
SSBP1-212ENST00000489378 SOSTQ9BQB4 213 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 GTSF1LQ9H1H1 148 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 A0A0U1RQV1 116 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 NMBP08949 121 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 TAS2R19P59542 299 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 TMEM183BQ1AE95 376 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 FAM122CQ6P4D5 195 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 RNASEKQ6P5S7 137 aaKnown RBP5.82□□□□□ -1.48
SSBP1-212ENST00000489378 FAM159AQ6UWV7 190 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 NRARPQ7Z6K4 114 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 TMEM183AQ8IXX5 376 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 OR51S1Q8NGJ8 323 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 MRPL53Q96EL3 112 aaKnown RBP5.82□□□□□ -1.48
SSBP1-212ENST00000489378 CIB3Q96Q77 187 aaPredicted RBP5.82□□□□□ -1.48
SSBP1-212ENST00000489378 KCNIP3Q9Y2W7 256 aa5.82□□□□□ -1.48
SSBP1-212ENST00000489378 IGKV2-40A0A087WW87 121 aaPredicted RBP5.81□□□□□ -1.48
SSBP1-212ENST00000489378 FABP12A6NFH5 140 aa5.81□□□□□ -1.48
SSBP1-212ENST00000489378 K7EPK0 472 aa5.81□□□□□ -1.48
SSBP1-212ENST00000489378 SYNGR2O43760 224 aa5.81□□□□□ -1.48
SSBP1-212ENST00000489378 MED6O75586 246 aa5.81□□□□□ -1.48
SSBP1-212ENST00000489378 IGKV2D-40P01614 121 aaPredicted RBP5.81□□□□□ -1.48
SSBP1-212ENST00000489378 RRAS2P62070 204 aaPredicted RBP5.81□□□□□ -1.48
SSBP1-212ENST00000489378 MCFD2Q8NI22 146 aa5.81□□□□□ -1.48
SSBP1-212ENST00000489378 SRRQ9GZT4 340 aa5.81□□□□□ -1.48
SSBP1-212ENST00000489378 V9GYH0 126 aa5.81□□□□□ -1.48
SSBP1-212ENST00000489378 FBLL1A6NHQ2 334 aaKnown RBP5.8□□□□□ -1.48
SSBP1-212ENST00000489378 COX7A2P2O60397 106 aa5.8□□□□□ -1.48
SSBP1-212ENST00000489378 UBE2G2P60604 165 aa5.8□□□□□ -1.48
SSBP1-212ENST00000489378 GUK1Q16774 197 aa5.8□□□□□ -1.48
SSBP1-212ENST00000489378 PXDC1Q5TGL8 231 aa5.8□□□□□ -1.48
SSBP1-212ENST00000489378 PRADC1Q9BSG0 188 aa5.8□□□□□ -1.48
SSBP1-212ENST00000489378 FAM25AB3EWG3 89 aa5.79□□□□□ -1.48
SSBP1-212ENST00000489378 FAM25CB3EWG5 89 aa5.79□□□□□ -1.48
SSBP1-212ENST00000489378 FAM25GB3EWG6 89 aa5.79□□□□□ -1.48
SSBP1-212ENST00000489378 M0R2P5 195 aa5.79□□□□□ -1.48
SSBP1-212ENST00000489378 ZNF253O75346 499 aa5.79□□□□□ -1.48
SSBP1-212ENST00000489378 NDUFB4O95168 129 aa5.79□□□□□ -1.48
SSBP1-212ENST00000489378 CEBPGP53567 150 aa5.79□□□□□ -1.48
SSBP1-212ENST00000489378 UBE2MP61081 183 aaKnown RBP5.79□□□□□ -1.48
SSBP1-212ENST00000489378 IFITM3Q01628 133 aa5.79□□□□□ -1.48
SSBP1-212ENST00000489378 RHOHQ15669 191 aa5.79□□□□□ -1.48
SSBP1-212ENST00000489378 C14orf177Q52M58 125 aa5.79□□□□□ -1.48
SSBP1-212ENST00000489378 SDIM1Q6ZPB5 146 aa5.79□□□□□ -1.48
SSBP1-212ENST00000489378 EXOC3-AS1Q8N2X6 119 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms