RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 ZNF256Q9Y2P7 627 aaPredicted RBP8.94□□□□□ -0.98
HLA-DOB-209ENST00000488325 IZUMO1RA6ND01 250 aa8.93□□□□□ -0.98
HLA-DOB-209ENST00000488325 GPX1P07203 203 aa8.93□□□□□ -0.98
HLA-DOB-209ENST00000488325 DEFB1P60022 68 aa8.93□□□□□ -0.98
HLA-DOB-209ENST00000488325 COX19Q49B96 90 aa8.93□□□□□ -0.98
HLA-DOB-209ENST00000488325 Q6AWC8 147 aa8.93□□□□□ -0.98
HLA-DOB-209ENST00000488325 APRG1Q8IVJ8 170 aa8.93□□□□□ -0.98
HLA-DOB-209ENST00000488325 ZFAND2AQ8N6M9 145 aa8.93□□□□□ -0.98
HLA-DOB-209ENST00000488325 FAM110AQ9BQ89 295 aa8.93□□□□□ -0.98
HLA-DOB-209ENST00000488325 TRAV21A0A0B4J279 112 aa8.92□□□□□ -0.98
HLA-DOB-209ENST00000488325 OR11H12B2RN74 326 aa8.92□□□□□ -0.98
HLA-DOB-209ENST00000488325 CA1P00915 261 aaPredicted RBP8.92□□□□□ -0.98
HLA-DOB-209ENST00000488325 ORM1P02763 201 aa8.92□□□□□ -0.98
HLA-DOB-209ENST00000488325 TYMSP04818 313 aa8.92□□□□□ -0.98
HLA-DOB-209ENST00000488325 HLA-DRB4P13762 266 aa8.92□□□□□ -0.98
HLA-DOB-209ENST00000488325 RPS10P46783 165 aaKnown RBP8.92□□□□□ -0.98
HLA-DOB-209ENST00000488325 ZNF80P51504 273 aaPredicted RBP8.92□□□□□ -0.98
HLA-DOB-209ENST00000488325 TCL1AP56279 114 aa8.92□□□□□ -0.98
HLA-DOB-209ENST00000488325 LINC01559Q495D7 138 aa8.92□□□□□ -0.98
HLA-DOB-209ENST00000488325 NEU1Q99519 415 aa8.92□□□□□ -0.98
HLA-DOB-209ENST00000488325 SRD5A3Q9H8P0 318 aa8.92□□□□□ -0.98
HLA-DOB-209ENST00000488325 HLA-DRB4X5D2U9 266 aa8.92□□□□□ -0.98
HLA-DOB-209ENST00000488325 KNCNA6PVL3 124 aa8.91□□□□□ -0.98
HLA-DOB-209ENST00000488325 A8MTW9 85 aa8.91□□□□□ -0.98
HLA-DOB-209ENST00000488325 HIGD1CA8MV81 97 aa8.91□□□□□ -0.98
HLA-DOB-209ENST00000488325 C1orf196B1AJZ1 125 aa8.91□□□□□ -0.98
HLA-DOB-209ENST00000488325 KLLNB2CW77 178 aa8.91□□□□□ -0.98
HLA-DOB-209ENST00000488325 ACTL10Q5JWF8 245 aa8.91□□□□□ -0.98
HLA-DOB-209ENST00000488325 GDF5OSQ5U4N7 250 aa8.91□□□□□ -0.98
HLA-DOB-209ENST00000488325 ATP5L2Q7Z4Y8 100 aa8.91□□□□□ -0.98
HLA-DOB-209ENST00000488325 BORCS7Q96B45 105 aa8.91□□□□□ -0.98
HLA-DOB-209ENST00000488325 RCHY1Q96PM5 261 aa8.91□□□□□ -0.98
HLA-DOB-209ENST00000488325 FRAS1Q86XX4 4008 aa8.91□□□□□ -0.98
HLA-DOB-209ENST00000488325 H3BMM0 161 aa8.9□□□□□ -0.98
HLA-DOB-209ENST00000488325 J3KRW8 73 aa8.9□□□□□ -0.98
HLA-DOB-209ENST00000488325 CDKN1BP46527 198 aa8.9□□□□□ -0.98
HLA-DOB-209ENST00000488325 FOXA3P55318 350 aaPredicted RBP8.9□□□□□ -0.98
HLA-DOB-209ENST00000488325 WDR73Q6P4I2 378 aa8.9□□□□□ -0.98
HLA-DOB-209ENST00000488325 RASL11AQ6T310 242 aa8.9□□□□□ -0.98
HLA-DOB-209ENST00000488325 NUP35Q8NFH5 326 aa8.9□□□□□ -0.98
HLA-DOB-209ENST00000488325 CLUHP3Q96NS8 147 aa8.9□□□□□ -0.98
HLA-DOB-209ENST00000488325 TMA7Q9Y2S6 64 aaKnown RBP8.9□□□□□ -0.98
HLA-DOB-209ENST00000488325 TMSB15BA0A087X1C1 80 aa8.89□□□□□ -0.99
HLA-DOB-209ENST00000488325 C7orf71A4D174 169 aa8.89□□□□□ -0.99
HLA-DOB-209ENST00000488325 IGKV3-20P01619 116 aa8.89□□□□□ -0.99
HLA-DOB-209ENST00000488325 AMBPP02760 352 aa8.89□□□□□ -0.99
HLA-DOB-209ENST00000488325 RNASE4P34096 147 aaKnown RBP8.89□□□□□ -0.99
HLA-DOB-209ENST00000488325 RAB5BP61020 215 aa8.89□□□□□ -0.99
HLA-DOB-209ENST00000488325 ODF3L2Q3SX64 289 aa8.89□□□□□ -0.99
HLA-DOB-209ENST00000488325 PRR9Q5T870 116 aa8.89□□□□□ -0.99
HLA-DOB-209ENST00000488325 STHQ8IWL8 128 aa8.89□□□□□ -0.99
HLA-DOB-209ENST00000488325 MT-ND6P03923 174 aa8.88□□□□□ -0.99
HLA-DOB-209ENST00000488325 S100A8P05109 93 aa8.88□□□□□ -0.99
HLA-DOB-209ENST00000488325 RIGQ13278 110 aa8.88□□□□□ -0.99
HLA-DOB-209ENST00000488325 MRPL54Q6P161 138 aaKnown RBP8.88□□□□□ -0.99
HLA-DOB-209ENST00000488325 AMTNQ6UX39 209 aa8.88□□□□□ -0.99
HLA-DOB-209ENST00000488325 GTSF1Q8WW33 167 aa8.88□□□□□ -0.99
HLA-DOB-209ENST00000488325 PGLYRP4Q96LB8 373 aa8.88□□□□□ -0.99
HLA-DOB-209ENST00000488325 PLECQ15149 4684 aaKnown RBP8.87□□□□□ -0.99
HLA-DOB-209ENST00000488325 KIAA1109Q2LD37 5005 aa8.87□□□□□ -0.99
HLA-DOB-209ENST00000488325 A0A1B0GUT8 65 aa8.87□□□□□ -0.99
HLA-DOB-209ENST00000488325 A0A1B0GW15 77 aa8.87□□□□□ -0.99
HLA-DOB-209ENST00000488325 SPINK4O60575 86 aa8.87□□□□□ -0.99
HLA-DOB-209ENST00000488325 GZMBP10144 247 aa8.87□□□□□ -0.99
HLA-DOB-209ENST00000488325 FER1L6-AS1Q8NA97 138 aa8.87□□□□□ -0.99
HLA-DOB-209ENST00000488325 KCNS1Q96KK3 526 aa8.87□□□□□ -0.99
HLA-DOB-209ENST00000488325 NAGKQ9UJ70 344 aa8.87□□□□□ -0.99
HLA-DOB-209ENST00000488325 TRAPPC1Q9Y5R8 145 aa8.87□□□□□ -0.99
HLA-DOB-209ENST00000488325 IGKV3D-20A0A0C4DH25 116 aa8.86□□□□□ -0.99
HLA-DOB-209ENST00000488325 F2Z2F3 143 aa8.86□□□□□ -0.99
HLA-DOB-209ENST00000488325 HLA-DQA1P01909 254 aa8.86□□□□□ -0.99
HLA-DOB-209ENST00000488325 IGLC6P0CF74 106 aa8.86□□□□□ -0.99
HLA-DOB-209ENST00000488325 CTRLP40313 264 aa8.86□□□□□ -0.99
HLA-DOB-209ENST00000488325 NUTF2P61970 127 aaKnown RBP8.86□□□□□ -0.99
HLA-DOB-209ENST00000488325 HBBP68871 147 aa8.86□□□□□ -0.99
HLA-DOB-209ENST00000488325 SPINK13Q1W4C9 94 aa8.86□□□□□ -0.99
HLA-DOB-209ENST00000488325 GFI1BQ5VTD9 330 aa8.86□□□□□ -0.99
HLA-DOB-209ENST00000488325 FAM159AQ6UWV7 190 aa8.86□□□□□ -0.99
HLA-DOB-209ENST00000488325 GTSCR1Q86UQ5 136 aa8.86□□□□□ -0.99
HLA-DOB-209ENST00000488325 GNB1LQ9BYB4 327 aa8.86□□□□□ -0.99
HLA-DOB-209ENST00000488325 ZMAT5Q9UDW3 170 aaKnown RBP8.86□□□□□ -0.99
HLA-DOB-209ENST00000488325 TRAV12-3A0A0B4J271 114 aa8.85□□□□□ -0.99
HLA-DOB-209ENST00000488325 GRIFINA4D1Z8 144 aa8.85□□□□□ -0.99
HLA-DOB-209ENST00000488325 SNURFLB1AK76 121 aa8.85□□□□□ -0.99
HLA-DOB-209ENST00000488325 M0R2Z0 102 aa8.85□□□□□ -0.99
HLA-DOB-209ENST00000488325 TRGC2P03986 189 aa8.85□□□□□ -0.99
HLA-DOB-209ENST00000488325 CD7P09564 240 aa8.85□□□□□ -0.99
HLA-DOB-209ENST00000488325 MED14OSP0DP75 135 aa8.85□□□□□ -0.99
HLA-DOB-209ENST00000488325 ASIPP42127 132 aa8.85□□□□□ -0.99
HLA-DOB-209ENST00000488325 RAB4BP61018 213 aa8.85□□□□□ -0.99
HLA-DOB-209ENST00000488325 ANXA2RQ3ZCQ2 193 aa8.85□□□□□ -0.99
HLA-DOB-209ENST00000488325 TRPT1Q86TN4 253 aaKnown RBP8.85□□□□□ -0.99
HLA-DOB-209ENST00000488325 FRZBQ92765 325 aa8.85□□□□□ -0.99
HLA-DOB-209ENST00000488325 C20orf144Q9BQM9 153 aa8.85□□□□□ -0.99
HLA-DOB-209ENST00000488325 TPPP3Q9BW30 176 aa8.85□□□□□ -0.99
HLA-DOB-209ENST00000488325 C11orf21Q9P2W6 132 aa8.85□□□□□ -0.99
HLA-DOB-209ENST00000488325 A0A1B0GXF2 115 aa8.84□□□□□ -0.99
HLA-DOB-209ENST00000488325 S100A4P26447 101 aaKnown RBP8.84□□□□□ -0.99
HLA-DOB-209ENST00000488325 KIR3DS1Q14943 382 aa8.84□□□□□ -0.99
HLA-DOB-209ENST00000488325 ZNF124Q15973 351 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms