RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 TUBA4BQ9H853 241 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 PRNDQ9UKY0 176 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 SSR3Q9UNL2 185 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 KIF25-AS1Q9Y6Z4 181 aa2.23□□□□□ -2.05
GPNMB-212ENST00000487890 STARD9Q9P2P6 4700 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 IGLV11-55A0A075B6I3 123 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 TRAV1-2A0A0B4J238 106 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 IGKV1-6A0A0C4DH72 117 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 TRDV1A0A1B0GX56 115 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 TMEM189A5PLL7 270 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 TMEM235A6NFC5 223 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 INS-IGF2F8WCM5 200 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 PANO1I0J062 215 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 CCL25O15444 150 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 ZNF861PO60384 105 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 CREBL2O60519 120 aaPredicted RBP2.22□□□□□ -2.05
GPNMB-212ENST00000487890 TRBV12-3P01733 135 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 PRH1P02810 166 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 NFYAP23511 347 aaPredicted RBP2.22□□□□□ -2.05
GPNMB-212ENST00000487890 UBE2AP49459 152 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 EMP1P54849 157 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 FXYD4P59646 89 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 HSPE1P61604 102 aaKnown RBP2.22□□□□□ -2.05
GPNMB-212ENST00000487890 RPL23P62829 140 aaKnown RBP2.22□□□□□ -2.05
GPNMB-212ENST00000487890 RHOGP84095 191 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 ATP5G2Q06055 141 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 ZNF79Q15937 498 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 SSX1Q16384 188 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 CDNFQ49AH0 187 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 C10orf55Q5SWW7 151 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 ZFAND6Q6FIF0 208 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 LINC01551Q86U37 167 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 LYPD6Q86Y78 171 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 SGPP2Q8IWX5 399 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 Q8N976 141 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 OR2K2Q8NGT1 345 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 ZNRF2Q8NHG8 242 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 MYOZ3Q8TDC0 251 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 BLNKQ8WV28 456 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 PHYHIPLQ96FC7 376 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 RNF5Q99942 180 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 RTBDNQ9BSG5 229 aaPredicted RBP2.22□□□□□ -2.05
GPNMB-212ENST00000487890 NDFIP1Q9BT67 221 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 TMEM243Q9BU79 118 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 SNHG12Q9BXW3 62 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 CST9LQ9H4G1 147 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 DUSP21Q9H596 190 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 UQCC1Q9NVA1 299 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 NDUFB11Q9NX14 153 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 COMMD9Q9P000 198 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 ANXA10Q9UJ72 324 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 ERG28Q9UKR5 140 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 ZFP30Q9Y2G7 519 aa2.22□□□□□ -2.05
GPNMB-212ENST00000487890 TRBV6-7A0A0A0MS04 114 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 TRAV8-4A0A0B4J246 113 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 IGKV3D-20A0A0C4DH25 116 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 IGHV3-66A0A0C4DH42 116 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 A0A1B0GVX0 72 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 A0A1B0GW64 132 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 MEIS3P1A6NDR6 274 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 FAM223BA6NKX1 122 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 C11orf94C9JXX5 98 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 H3BUA1 57 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 J3KT08 172 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 DNASE2O00115 360 aaPredicted RBP2.21□□□□□ -2.06
GPNMB-212ENST00000487890 CORTO00230 105 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 OR7C2O60412 319 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 UPK1BO75841 260 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 IFNA17P01571 189 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 P01737 135 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 SAA1P0DJI8 122 aaPredicted RBP2.21□□□□□ -2.06
GPNMB-212ENST00000487890 DEFA4P12838 97 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 ELK1P19419 428 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 FGF7P21781 194 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 SDC2P34741 201 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 RPL27AP46776 148 aaKnown RBP2.21□□□□□ -2.06
GPNMB-212ENST00000487890 TAS2R30P59541 319 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 GABARAPL2P60520 117 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 RAB5BP61020 215 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 ERCC8Q13216 396 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 SCGB2B2Q4G0G5 96 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 ZNF773Q6PK81 442 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 GOLT1AQ6ZVE7 132 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 SBSPONQ8IVN8 264 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 FAM223AQ8IWN6 122 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 H1FOOQ8IZA3 346 aaPredicted RBP2.21□□□□□ -2.06
GPNMB-212ENST00000487890 C12orf45Q8N5I9 185 aaPredicted RBP2.21□□□□□ -2.06
GPNMB-212ENST00000487890 ZNF645Q8N7E2 425 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 C15orf56Q8N910 161 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 OR13C8Q8NGS7 320 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 OR51H1Q8NH63 302 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 TERB2Q8NHR7 220 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 MUC7Q8TAX7 377 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 RXFP4Q8TDU9 374 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 FAM104AQ969W3 186 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 ISOC1Q96CN7 298 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 USMG5Q96IX5 58 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 C18orf15Q96N68 181 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 HSD17B10Q99714 261 aaKnown RBP2.21□□□□□ -2.06
GPNMB-212ENST00000487890 SPIN2AQ99865 258 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms