RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 C19orf84I3L1E1 186 aa13.42□□□□□ -0.26
TNXB-205ENST00000486148 ETDBQ3ZM63 59 aa13.42□□□□□ -0.26
TNXB-205ENST00000486148 TRGV3P03979 118 aa13.42□□□□□ -0.26
TNXB-205ENST00000486148 INSL3P51460 131 aa13.42□□□□□ -0.26
TNXB-205ENST00000486148 U3KQE9 123 aa13.42□□□□□ -0.26
TNXB-205ENST00000486148 IGKV2D-26A0A0A0MRZ7 120 aa13.41□□□□□ -0.26
TNXB-205ENST00000486148 LINC01546A6NGU7 62 aa13.41□□□□□ -0.26
TNXB-205ENST00000486148 LEPP41159 167 aa13.41□□□□□ -0.26
TNXB-205ENST00000486148 TMEM78Q5T7P6 136 aa13.41□□□□□ -0.26
TNXB-205ENST00000486148 MTURNQ8N3F0 131 aa13.4□□□□□ -0.26
TNXB-205ENST00000486148 NCOR2Q9Y618 2525 aa13.4□□□□□ -0.26
TNXB-205ENST00000486148 CHD8Q9HCK8 2581 aa13.4□□□□□ -0.26
TNXB-205ENST00000486148 CELSR1Q9NYQ6 3014 aa13.39□□□□□ -0.27
TNXB-205ENST00000486148 IGHV7-4-1A0A0J9YVY3 117 aa13.39□□□□□ -0.27
TNXB-205ENST00000486148 F8W1H4 67 aa13.39□□□□□ -0.27
TNXB-205ENST00000486148 ITLN2Q8WWU7 325 aaPredicted RBP13.39□□□□□ -0.27
TNXB-205ENST00000486148 MRAP2Q96G30 205 aa13.39□□□□□ -0.27
TNXB-205ENST00000486148 GEMIN7Q9H840 131 aaKnown RBP13.39□□□□□ -0.27
TNXB-205ENST00000486148 NHP2Q9NX24 153 aaKnown RBP13.39□□□□□ -0.27
TNXB-205ENST00000486148 ABCA2Q9BZC7 2435 aa13.39□□□□□ -0.27
TNXB-205ENST00000486148 TRAV41A0A0B4J266 112 aa13.39□□□□□ -0.27
TNXB-205ENST00000486148 H3BMG7 143 aa13.39□□□□□ -0.27
TNXB-205ENST00000486148 J3QR89 54 aa13.39□□□□□ -0.27
TNXB-205ENST00000486148 FCER1GP30273 86 aa13.39□□□□□ -0.27
TNXB-205ENST00000486148 AGRNO00468 2067 aa13.38□□□□□ -0.27
TNXB-205ENST00000486148 E9PLD3 99 aa13.38□□□□□ -0.27
TNXB-205ENST00000486148 C19orf54Q5BKX5 351 aa13.38□□□□□ -0.27
TNXB-205ENST00000486148 C9orf47Q6ZRZ4 202 aa13.38□□□□□ -0.27
TNXB-205ENST00000486148 PIFOQ8TCI5 191 aa13.38□□□□□ -0.27
TNXB-205ENST00000486148 MRPL53Q96EL3 112 aaKnown RBP13.38□□□□□ -0.27
TNXB-205ENST00000486148 CHAC1Q9BUX1 264 aa13.38□□□□□ -0.27
TNXB-205ENST00000486148 NXT2Q9NPJ8 142 aaKnown RBP13.38□□□□□ -0.27
TNXB-205ENST00000486148 BRD3OSQ6XYD6 125 aa13.38□□□□□ -0.27
TNXB-205ENST00000486148 MOB4Q9Y3A3 225 aa13.38□□□□□ -0.27
TNXB-205ENST00000486148 VPS13CQ709C8 3753 aa13.38□□□□□ -0.27
TNXB-205ENST00000486148 IGHV4-39P01824 125 aa13.37□□□□□ -0.27
TNXB-205ENST00000486148 PRR9Q5T870 116 aa13.37□□□□□ -0.27
TNXB-205ENST00000486148 C20orf173Q96LM9 149 aa13.37□□□□□ -0.27
TNXB-205ENST00000486148 TRAV26-2A0A0B4J265 109 aa13.37□□□□□ -0.27
TNXB-205ENST00000486148 C16orf92Q96LL3 132 aa13.37□□□□□ -0.27
TNXB-205ENST00000486148 IGLV2-18A0A075B6J9 118 aa13.36□□□□□ -0.27
TNXB-205ENST00000486148 IGLL5B9A064 214 aa13.36□□□□□ -0.27
TNXB-205ENST00000486148 TRBV12-3P01733 135 aa13.36□□□□□ -0.27
TNXB-205ENST00000486148 IGF1P05019 195 aa13.36□□□□□ -0.27
TNXB-205ENST00000486148 AMTNQ6UX39 209 aa13.36□□□□□ -0.27
TNXB-205ENST00000486148 GLMPQ8WWB7 406 aa13.36□□□□□ -0.27
TNXB-205ENST00000486148 HIGD1BQ9P298 99 aa13.36□□□□□ -0.27
TNXB-205ENST00000486148 ODF1Q14990 250 aa13.36□□□□□ -0.27
TNXB-205ENST00000486148 UNQ9165/PRO28630Q6UXU0 137 aa13.36□□□□□ -0.27
TNXB-205ENST00000486148 TMEM158Q8WZ71 300 aa13.36□□□□□ -0.27
TNXB-205ENST00000486148 HIF1ANQ9NWT6 349 aa13.36□□□□□ -0.27
TNXB-205ENST00000486148 ITPR1Q14643 2758 aa13.36□□□□□ -0.27
TNXB-205ENST00000486148 Q8N8P6 123 aa13.36□□□□□ -0.27
TNXB-205ENST00000486148 UFC1Q9Y3C8 167 aa13.36□□□□□ -0.27
TNXB-205ENST00000486148 ARL3P36405 182 aa13.35□□□□□ -0.27
TNXB-205ENST00000486148 C20orf78Q9BR46 151 aa13.35□□□□□ -0.27
TNXB-205ENST00000486148 PRO0461Q9UI25 63 aa13.35□□□□□ -0.27
TNXB-205ENST00000486148 NRACQ8N912 160 aa13.35□□□□□ -0.27
TNXB-205ENST00000486148 IGHV1-69DA0A0B4J2H0 117 aa13.34□□□□□ -0.27
TNXB-205ENST00000486148 FAM223BA6NKX1 122 aa13.34□□□□□ -0.27
TNXB-205ENST00000486148 J3KRW8 73 aa13.34□□□□□ -0.27
TNXB-205ENST00000486148 IGHV1-69P01742 117 aa13.34□□□□□ -0.27
TNXB-205ENST00000486148 GPHB5Q86YW7 130 aa13.34□□□□□ -0.27
TNXB-205ENST00000486148 FAM223AQ8IWN6 122 aa13.34□□□□□ -0.27
TNXB-205ENST00000486148 ZMAT4Q9H898 229 aa13.34□□□□□ -0.27
TNXB-205ENST00000486148 TRBV25-1A0A075B6N4 114 aa13.34□□□□□ -0.27
TNXB-205ENST00000486148 TRAV40A0A0B4J280 105 aa13.34□□□□□ -0.27
TNXB-205ENST00000486148 PRSS1P07477 247 aa13.34□□□□□ -0.27
TNXB-205ENST00000486148 CEND1Q8N111 149 aa13.34□□□□□ -0.27
TNXB-205ENST00000486148 HHLA3Q9XRX5 114 aa13.34□□□□□ -0.27
TNXB-205ENST00000486148 H3BVH4 76 aa13.33□□□□□ -0.28
TNXB-205ENST00000486148 DEFB1P60022 68 aa13.33□□□□□ -0.28
TNXB-205ENST00000486148 ZNF479Q96JC4 524 aa13.33□□□□□ -0.28
TNXB-205ENST00000486148 TM2D2Q9BX73 214 aa13.33□□□□□ -0.28
TNXB-205ENST00000486148 GNLYP22749 145 aa13.33□□□□□ -0.28
TNXB-205ENST00000486148 CRIP2P52943 208 aaPredicted RBP13.33□□□□□ -0.28
TNXB-205ENST00000486148 SPANXN1Q5VSR9 72 aa13.33□□□□□ -0.28
TNXB-205ENST00000486148 MRPL16Q9NX20 251 aaKnown RBP13.33□□□□□ -0.28
TNXB-205ENST00000486148 GATA3P23771 443 aa13.32□□□□□ -0.28
TNXB-205ENST00000486148 C9orf139Q6ZV77 190 aa13.32□□□□□ -0.28
TNXB-205ENST00000486148 FOXC2Q99958 501 aa13.32□□□□□ -0.28
TNXB-205ENST00000486148 IGHV4-4A0A075B6R2 117 aa13.32□□□□□ -0.28
TNXB-205ENST00000486148 IGHV4-61A0A0C4DH41 118 aa13.32□□□□□ -0.28
TNXB-205ENST00000486148 SPRY2O43597 315 aa13.31□□□□□ -0.28
TNXB-205ENST00000486148 LY6EQ16553 131 aa13.31□□□□□ -0.28
TNXB-205ENST00000486148 GAGE13Q4V321 117 aa13.31□□□□□ -0.28
TNXB-205ENST00000486148 CDIP1Q9H305 208 aa13.31□□□□□ -0.28
TNXB-205ENST00000486148 SPTAN1Q13813 2472 aaKnown RBP13.3□□□□□ -0.28
TNXB-205ENST00000486148 IGHV4-38-2P0DP08 117 aa13.3□□□□□ -0.28
TNXB-205ENST00000486148 IGHV3-11P01762 117 aa13.3□□□□□ -0.28
TNXB-205ENST00000486148 IGKCP01834 107 aa13.3□□□□□ -0.28
TNXB-205ENST00000486148 ZFAND2AQ8N6M9 145 aa13.3□□□□□ -0.28
TNXB-205ENST00000486148 TSPAN13O95857 204 aa13.29□□□□□ -0.28
TNXB-205ENST00000486148 SOCS3O14543 225 aa13.29□□□□□ -0.28
TNXB-205ENST00000486148 LAGE3Q14657 143 aa13.29□□□□□ -0.28
TNXB-205ENST00000486148 GTSCR1Q86UQ5 136 aa13.29□□□□□ -0.28
TNXB-205ENST00000486148 ZNF418Q8TF45 676 aaPredicted RBP13.29□□□□□ -0.28
TNXB-205ENST00000486148 KLK15Q9H2R5 256 aa13.29□□□□□ -0.28
TNXB-205ENST00000486148 NDUFA4O00483 81 aa13.28□□□□□ -0.28
TNXB-205ENST00000486148 FHL3Q13643 280 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms