RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 Q8NFD4 153 aa8.33□□□□□ -1.08
SRGAP3-207ENST00000485983 LENEPQ9Y5L5 61 aa8.33□□□□□ -1.08
SRGAP3-207ENST00000485983 F6UB75 175 aa8.33□□□□□ -1.08
SRGAP3-207ENST00000485983 IGHV4-38-2P0DP08 117 aa8.33□□□□□ -1.08
SRGAP3-207ENST00000485983 LYL1P12980 280 aa8.33□□□□□ -1.08
SRGAP3-207ENST00000485983 Q0VG73 95 aa8.33□□□□□ -1.08
SRGAP3-207ENST00000485983 SLC25A29Q8N8R3 303 aa8.33□□□□□ -1.08
SRGAP3-207ENST00000485983 FGF6P10767 208 aa8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 FUSP35637 526 aaKnown RBP eCLIP8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 UBE2AP49459 152 aa8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 GTF3C1Q12789 2109 aa8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 RNASE13Q5GAN3 156 aaKnown RBP8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 ZNF491Q8N8L2 437 aa8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 C10orf105Q8TEF2 133 aa8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 MRPL36Q9P0J6 103 aaKnown RBP8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 TRAV12-1A0A0B4J245 112 aa8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 A8MWP6 167 aa8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 PHF3Q92576 2039 aaKnown RBP8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 PLCE1Q9P212 2302 aa8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 J3QQQ9 107 aa8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 ADAMTSL5Q6ZMM2 481 aa8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 FAM231DQ6ZW35 169 aa8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 C5orf38Q86SI9 138 aa8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 C18orf32Q8TCD1 76 aa8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 F8VRH5 84 aa8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 FANCD2OSQ96PS1 177 aa8.32□□□□□ -1.08
SRGAP3-207ENST00000485983 CLPSL1A2RUU4 121 aa8.31□□□□□ -1.08
SRGAP3-207ENST00000485983 GNRH2O43555 120 aa8.31□□□□□ -1.08
SRGAP3-207ENST00000485983 COX7A2LO14548 114 aa8.31□□□□□ -1.08
SRGAP3-207ENST00000485983 ZNF503-AS2A6NEH8 195 aa8.31□□□□□ -1.08
SRGAP3-207ENST00000485983 HERV-K104P63124 156 aa8.31□□□□□ -1.08
SRGAP3-207ENST00000485983 EGR2P11161 476 aaPredicted RBP8.31□□□□□ -1.08
SRGAP3-207ENST00000485983 IGF2-ASQ6U949 168 aa8.31□□□□□ -1.08
SRGAP3-207ENST00000485983 PRO1854Q9UHT4 67 aa8.31□□□□□ -1.08
SRGAP3-207ENST00000485983 BVES-AS1Q5T3Y7 98 aa8.3□□□□□ -1.08
SRGAP3-207ENST00000485983 C15orf53Q8NAA6 179 aa8.3□□□□□ -1.08
SRGAP3-207ENST00000485983 ZC2HC1AQ96GY0 325 aa8.3□□□□□ -1.08
SRGAP3-207ENST00000485983 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.3□□□□□ -1.08
SRGAP3-207ENST00000485983 TRAV4A0A0B4J268 109 aa8.3□□□□□ -1.08
SRGAP3-207ENST00000485983 IGKV2-29A2NJV5 120 aaPredicted RBP8.3□□□□□ -1.08
SRGAP3-207ENST00000485983 TINCRA0A1B0GVN0 87 aa8.3□□□□□ -1.08
SRGAP3-207ENST00000485983 DAZAP2Q15038 168 aaPredicted RBP8.3□□□□□ -1.08
SRGAP3-207ENST00000485983 MRPL35Q9NZE8 188 aaKnown RBP8.3□□□□□ -1.08
SRGAP3-207ENST00000485983 CTSZQ9UBR2 303 aa8.3□□□□□ -1.08
SRGAP3-207ENST00000485983 COX11Q9Y6N1 276 aa8.3□□□□□ -1.08
SRGAP3-207ENST00000485983 C9orf153Q5TBE3 101 aa8.3□□□□□ -1.08
SRGAP3-207ENST00000485983 AJUBAQ96IF1 538 aa8.3□□□□□ -1.08
SRGAP3-207ENST00000485983 AGPAT4-IT1Q9H0P7 198 aa8.3□□□□□ -1.08
SRGAP3-207ENST00000485983 IGLV10-54A0A075B6I4 117 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 RBAKDNA6NC62 111 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 K7EQD1 137 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 BLCAPP62952 87 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 POU2AF1Q16633 256 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 AMTNQ6UX39 209 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 SPANXA1Q9NS26 97 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 SPANXDQ9BXN6 97 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 NPYP01303 97 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 CYYR1Q96J86 154 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 IGHV4-4A0A075B6R2 117 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 LGALS9BQ3B8N2 356 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 LGALS9CQ6DKI2 356 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 Q9H8V8 135 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 CHKB-CPT1BH3BT56 60 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 DAZ2Q13117 558 aaKnown RBP8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 DAZ4Q86SG3 579 aaKnown RBP8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 DYNAPQ8N1N2 210 aa8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 DAZ3Q9NR90 486 aaKnown RBP8.29□□□□□ -1.08
SRGAP3-207ENST00000485983 INSL3P51460 131 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 NRGNQ92686 78 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 FXYD5Q96DB9 178 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 ESM1Q9NQ30 184 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 MED13LQ71F56 2210 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 GTSF1LQ9H1H1 148 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 ORMDL1Q9P0S3 153 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 IGLL5B9A064 214 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 K7EMI3 77 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 ZNF124Q15973 351 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 IGFL2Q6UWQ7 119 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 MALRD1Q5VYJ5 2156 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 DOCK9Q9BZ29 2069 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 CARD19Q96LW7 228 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 VWA8A3KMH1 1905 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 TTC28Q96AY4 2481 aa8.28□□□□□ -1.08
SRGAP3-207ENST00000485983 NDUFA1O15239 70 aa8.27□□□□□ -1.08
SRGAP3-207ENST00000485983 WT1P19544 449 aaPredicted RBP8.27□□□□□ -1.08
SRGAP3-207ENST00000485983 MGAMO43451 1857 aa8.27□□□□□ -1.09
SRGAP3-207ENST00000485983 HLA-DMBP28068 263 aa8.27□□□□□ -1.09
SRGAP3-207ENST00000485983 DEFB135Q30KP9 77 aa8.27□□□□□ -1.09
SRGAP3-207ENST00000485983 IGLC7A0M8Q6 106 aa8.27□□□□□ -1.09
SRGAP3-207ENST00000485983 UBE2V1Q13404 147 aa8.27□□□□□ -1.09
SRGAP3-207ENST00000485983 PPDPFLQ8WWR9 84 aa8.27□□□□□ -1.09
SRGAP3-207ENST00000485983 FHL1Q13642 323 aa8.27□□□□□ -1.09
SRGAP3-207ENST00000485983 IGHV7-81A0A0B4J1V7 117 aa8.26□□□□□ -1.09
SRGAP3-207ENST00000485983 SMIM27A0A1W2PRY6 76 aa8.26□□□□□ -1.09
SRGAP3-207ENST00000485983 TRACP01848 142 aa8.26□□□□□ -1.09
SRGAP3-207ENST00000485983 HIST2H2BCQ6DN03 193 aa8.26□□□□□ -1.09
SRGAP3-207ENST00000485983 MRPL52Q86TS9 123 aaKnown RBP8.26□□□□□ -1.09
SRGAP3-207ENST00000485983 NPBQ8NG41 125 aa8.26□□□□□ -1.09
SRGAP3-207ENST00000485983 HHLA3Q9XRX5 114 aa8.26□□□□□ -1.09
SRGAP3-207ENST00000485983 TP53BP1Q12888 1972 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms