RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 MTFP1Q9UDX5 166 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 GPR132Q9UNW8 380 aa4.11□□□□□ -1.75
SMC4-217ENST00000485867 FSIP2Q5CZC0 6907 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 IGKV2-40A0A087WW87 121 aaPredicted RBP4.1□□□□□ -1.75
SMC4-217ENST00000485867 TRBV6-4A0A1B0GX49 114 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 FBLL1A6NHQ2 334 aaKnown RBP4.1□□□□□ -1.75
SMC4-217ENST00000485867 USP17L23D6RBM5 183 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 M0R2P5 195 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 MED6O75586 246 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 IGKV2D-40P01614 121 aaPredicted RBP4.1□□□□□ -1.75
SMC4-217ENST00000485867 PRSS1P07477 247 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 TAS2R19P59542 299 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 UBE2MP61081 183 aaKnown RBP4.1□□□□□ -1.75
SMC4-217ENST00000485867 PRR3P79522 188 aaKnown RBP4.1□□□□□ -1.75
SMC4-217ENST00000485867 SLC38A11Q08AI6 406 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 BAK1Q16611 211 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 GUK1Q16774 197 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 DGAT2L7PQ6IED9 249 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 REG3GQ6UW15 175 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 DPPA3Q6W0C5 159 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 TMEM229BQ8NBD8 167 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 YIPF6Q96EC8 236 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 C2orf50Q96LR7 162 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 CNBD2Q96M20 576 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 COMMD3Q9UBI1 195 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 KLK12Q9UKR0 248 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 KCNIP3Q9Y2W7 256 aa4.1□□□□□ -1.75
SMC4-217ENST00000485867 ANKRD65E5RJM6 399 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 SYNGR2O43760 224 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 COX7A2P2O60397 106 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 NDUFB4O95168 129 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 SEC11BP0C7V7 166 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 LINC00694P0DN24 101 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 POLR2GP62487 172 aaKnown RBP eCLIP4.09□□□□□ -1.75
SMC4-217ENST00000485867 SRPXP78539 464 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 RPL19P84098 196 aaKnown RBP4.09□□□□□ -1.75
SMC4-217ENST00000485867 TMEM78Q5T7P6 136 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 ZNF546Q86UE3 836 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 NIT1Q86X76 327 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 Q8TAT8 98 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 C7orf33Q8WU49 177 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 RNF185Q96GF1 192 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 SH3BGRL3Q9H299 93 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 ZNF492Q9P255 531 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 PRELID1Q9Y255 219 aa4.09□□□□□ -1.75
SMC4-217ENST00000485867 STRAPQ9Y3F4 350 aaKnown RBP4.09□□□□□ -1.75
SMC4-217ENST00000485867 TRBV19A0A075B6N1 114 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 IGHV3-73A0A0B4J1V6 119 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 TRBV7-9A0A0J9YWB2 115 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 DUXBA0A1W2PPF3 345 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 C5orf51A6NDU8 294 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 GOSR2O14653 212 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 AGPAT2O15120 278 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 HPGDSO60760 199 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 CHTF8P0CG12 524 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 HIST1H1EP10412 219 aaKnown RBP4.08□□□□□ -1.76
SMC4-217ENST00000485867 SLC25A6P12236 298 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 RRAS2P62070 204 aaPredicted RBP4.08□□□□□ -1.76
SMC4-217ENST00000485867 RAB31Q13636 194 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 ZNF266Q14584 549 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 C10orf113Q5VZT2 155 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 SPINK6Q6UWN8 80 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 EXOC3-AS1Q8N2X6 119 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 SPACA4Q8TDM5 124 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 RAB2BQ8WUD1 216 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 SDF2L1Q9HCN8 221 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 NPVFQ9HCQ7 196 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 PLAC8Q9NZF1 115 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 VAX2Q9UIW0 290 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 URGCP-MRPS24S4R325 110 aa4.08□□□□□ -1.76
SMC4-217ENST00000485867 A0A087WWC5 75 aa4.07□□□□□ -1.76
SMC4-217ENST00000485867 DISC1C4P0D8 188 aa4.07□□□□□ -1.76
SMC4-217ENST00000485867 FNDC10F2Z333 226 aa4.07□□□□□ -1.76
SMC4-217ENST00000485867 CIDEAO60543 219 aa4.07□□□□□ -1.76
SMC4-217ENST00000485867 ZNF138P52744 262 aa4.07□□□□□ -1.76
SMC4-217ENST00000485867 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
SMC4-217ENST00000485867 Q0VG73 95 aa4.07□□□□□ -1.76
SMC4-217ENST00000485867 CFAP126Q5VTH2 177 aa4.07□□□□□ -1.76
SMC4-217ENST00000485867 Q6AWC8 147 aa4.07□□□□□ -1.76
SMC4-217ENST00000485867 FAM159AQ6UWV7 190 aa4.07□□□□□ -1.76
SMC4-217ENST00000485867 CYB561D1Q8N8Q1 229 aa4.07□□□□□ -1.76
SMC4-217ENST00000485867 OR10G9Q8NGN4 311 aa4.07□□□□□ -1.76
SMC4-217ENST00000485867 SOSTQ9BQB4 213 aa4.07□□□□□ -1.76
SMC4-217ENST00000485867 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
SMC4-217ENST00000485867 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
SMC4-217ENST00000485867 FAM25AB3EWG3 89 aa4.06□□□□□ -1.76
SMC4-217ENST00000485867 FAM25CB3EWG5 89 aa4.06□□□□□ -1.76
SMC4-217ENST00000485867 FAM25GB3EWG6 89 aa4.06□□□□□ -1.76
SMC4-217ENST00000485867 GNRH2O43555 120 aa4.06□□□□□ -1.76
SMC4-217ENST00000485867 HLA-DQA1P01909 254 aa4.06□□□□□ -1.76
SMC4-217ENST00000485867 MGST1P10620 155 aaKnown RBP4.06□□□□□ -1.76
SMC4-217ENST00000485867 ANXA3P12429 323 aa4.06□□□□□ -1.76
SMC4-217ENST00000485867 GAGE1Q13065 139 aa4.06□□□□□ -1.76
SMC4-217ENST00000485867 GAGE4Q13068 117 aa4.06□□□□□ -1.76
SMC4-217ENST00000485867 GAGE5Q13069 117 aa4.06□□□□□ -1.76
SMC4-217ENST00000485867 PDE6HQ13956 83 aa4.06□□□□□ -1.76
SMC4-217ENST00000485867 ELOBQ15370 118 aa4.06□□□□□ -1.76
SMC4-217ENST00000485867 DPH3Q96FX2 82 aa4.06□□□□□ -1.76
SMC4-217ENST00000485867 MGST2Q99735 147 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms