RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 STHQ8IWL8 128 aa7.09□□□□□ -1.27
CTSA-208ENST00000485627 ZFP82Q8N141 532 aa7.09□□□□□ -1.27
CTSA-208ENST00000485627 FAM19A4Q96LR4 140 aa7.09□□□□□ -1.27
CTSA-208ENST00000485627 ZNF747Q9BV97 191 aa7.09□□□□□ -1.27
CTSA-208ENST00000485627 NAGKQ9UJ70 344 aa7.09□□□□□ -1.27
CTSA-208ENST00000485627 HLA-DRB4X5D2U9 266 aa7.09□□□□□ -1.27
CTSA-208ENST00000485627 A0A1B0GUT8 65 aa7.08□□□□□ -1.28
CTSA-208ENST00000485627 C7orf71A4D174 169 aa7.08□□□□□ -1.28
CTSA-208ENST00000485627 SNURFLB1AK76 121 aa7.08□□□□□ -1.28
CTSA-208ENST00000485627 H3BMM0 161 aa7.08□□□□□ -1.28
CTSA-208ENST00000485627 MT-ND6P03923 174 aa7.08□□□□□ -1.28
CTSA-208ENST00000485627 S100A8P05109 93 aa7.08□□□□□ -1.28
CTSA-208ENST00000485627 S100A6P06703 90 aa7.08□□□□□ -1.28
CTSA-208ENST00000485627 FOXA3P55318 350 aaPredicted RBP7.08□□□□□ -1.28
CTSA-208ENST00000485627 HBBP68871 147 aa7.08□□□□□ -1.28
CTSA-208ENST00000485627 PRR9Q5T870 116 aa7.08□□□□□ -1.28
CTSA-208ENST00000485627 APRG1Q8IVJ8 170 aa7.08□□□□□ -1.28
CTSA-208ENST00000485627 FER1L6-AS1Q8NA97 138 aa7.08□□□□□ -1.28
CTSA-208ENST00000485627 GTSF1Q8WW33 167 aa7.08□□□□□ -1.28
CTSA-208ENST00000485627 GNB1LQ9BYB4 327 aa7.08□□□□□ -1.28
CTSA-208ENST00000485627 WNK1Q9H4A3 2382 aa7.07□□□□□ -1.28
CTSA-208ENST00000485627 A0A1B0GW15 77 aa7.07□□□□□ -1.28
CTSA-208ENST00000485627 GRIFINA4D1Z8 144 aa7.07□□□□□ -1.28
CTSA-208ENST00000485627 KLLNB2CW77 178 aa7.07□□□□□ -1.28
CTSA-208ENST00000485627 F2Z2F3 143 aa7.07□□□□□ -1.28
CTSA-208ENST00000485627 M0R2Z0 102 aa7.07□□□□□ -1.28
CTSA-208ENST00000485627 HLA-DQA1P01909 254 aa7.07□□□□□ -1.28
CTSA-208ENST00000485627 S100A4P26447 101 aaKnown RBP7.07□□□□□ -1.28
CTSA-208ENST00000485627 CAMPP49913 170 aa7.07□□□□□ -1.28
CTSA-208ENST00000485627 FABP9Q0Z7S8 132 aa7.07□□□□□ -1.28
CTSA-208ENST00000485627 SPINK13Q1W4C9 94 aa7.07□□□□□ -1.28
CTSA-208ENST00000485627 ODF3L2Q3SX64 289 aa7.07□□□□□ -1.28
CTSA-208ENST00000485627 SHISA2Q6UWI4 295 aa7.07□□□□□ -1.28
CTSA-208ENST00000485627 LYZL1Q6UWQ5 148 aa7.07□□□□□ -1.28
CTSA-208ENST00000485627 FAM159AQ6UWV7 190 aa7.07□□□□□ -1.28
CTSA-208ENST00000485627 FAM110AQ9BQ89 295 aa7.07□□□□□ -1.28
CTSA-208ENST00000485627 TRAV12-3A0A0B4J271 114 aa7.06□□□□□ -1.28
CTSA-208ENST00000485627 IGKV3D-20A0A0C4DH25 116 aa7.06□□□□□ -1.28
CTSA-208ENST00000485627 AMBPP02760 352 aa7.06□□□□□ -1.28
CTSA-208ENST00000485627 ASIPP42127 132 aa7.06□□□□□ -1.28
CTSA-208ENST00000485627 NUTF2P61970 127 aaKnown RBP7.06□□□□□ -1.28
CTSA-208ENST00000485627 ZNF124Q15973 351 aa7.06□□□□□ -1.28
CTSA-208ENST00000485627 MUC21Q5SSG8 566 aa7.06□□□□□ -1.28
CTSA-208ENST00000485627 KCNS1Q96KK3 526 aa7.06□□□□□ -1.28
CTSA-208ENST00000485627 MRPL18Q9H0U6 180 aaKnown RBP7.06□□□□□ -1.28
CTSA-208ENST00000485627 TRAV12-2A0A075B6T6 113 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 A8MTW9 85 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 APCSP02743 223 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 ARMS2P0C7Q2 107 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 FXYD7P58549 80 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 SSTP61278 116 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 KIR3DS1Q14943 382 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 BEAN1Q3B7T3 259 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 ANXA2RQ3ZCQ2 193 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 GFI1BQ5VTD9 330 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 AMTNQ6UX39 209 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 TMEM136Q6ZRR5 245 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 GTSCR1Q86UQ5 136 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 CLUHP3Q96NS8 147 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 C11orf21Q9P2W6 132 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 TIMM8BQ9Y5J9 83 aaPredicted RBP7.05□□□□□ -1.28
CTSA-208ENST00000485627 NBEAL2Q6ZNJ1 2754 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 TRRAPQ9Y4A5 3859 aa7.05□□□□□ -1.28
CTSA-208ENST00000485627 A0A1B0GXF2 115 aa7.04□□□□□ -1.28
CTSA-208ENST00000485627 CD7P09564 240 aa7.04□□□□□ -1.28
CTSA-208ENST00000485627 TRGC1P0CF51 173 aa7.04□□□□□ -1.28
CTSA-208ENST00000485627 IGLC6P0CF74 106 aa7.04□□□□□ -1.28
CTSA-208ENST00000485627 CTRLP40313 264 aa7.04□□□□□ -1.28
CTSA-208ENST00000485627 CACNG7P62955 275 aa7.04□□□□□ -1.28
CTSA-208ENST00000485627 TWIST1Q15672 202 aa7.04□□□□□ -1.28
CTSA-208ENST00000485627 Q6ZQT7 251 aa7.04□□□□□ -1.28
CTSA-208ENST00000485627 SMIM15Q7Z3B0 74 aa7.04□□□□□ -1.28
CTSA-208ENST00000485627 NOTCH1P46531 2555 aa7.04□□□□□ -1.28
CTSA-208ENST00000485627 IGHV1OR15-1A0A075B7D0 117 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 H3BVH4 76 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 HIST1H2BKO60814 126 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 ZNF324O75467 553 aaPredicted RBP7.03□□□□□ -1.28
CTSA-208ENST00000485627 INSP01308 110 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 HIST1H2BJP06899 126 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 OR5AL1P0C617 328 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 FRMD6-AS1P0C7T7 363 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 HIST1H2BOP23527 126 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 HIST1H2BBP33778 126 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 NDUFA6P56556 154 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 HIST1H2BDP58876 126 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 HIST1H2BCP62807 126 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 HIST2H2BEQ16778 126 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.03□□□□□ -1.28
CTSA-208ENST00000485627 SPANXN1Q5VSR9 72 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 WFDC9Q8NEX5 89 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 HIST1H2BHQ93079 126 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 HIST1H2BNQ99877 126 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 HIST1H2BMQ99879 126 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 C20orf144Q9BQM9 153 aa7.03□□□□□ -1.28
CTSA-208ENST00000485627 PRKDCP78527 4128 aaKnown RBP7.03□□□□□ -1.28
CTSA-208ENST00000485627 TRGV11A0A075B6L2 103 aa7.02□□□□□ -1.29
CTSA-208ENST00000485627 MUC21A0A0G2JKD1 596 aa7.02□□□□□ -1.29
CTSA-208ENST00000485627 MUC21A0A140T8X8 626 aa7.02□□□□□ -1.29
CTSA-208ENST00000485627 RBMY1BA6NDE4 496 aaKnown RBP7.02□□□□□ -1.29
CTSA-208ENST00000485627 RBMY1EA6NEQ0 496 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms