RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-208	ENST00000485365	PHLDA1	Q8WV24	401 aa	Predicted RBP	3.38	□□□□□ -1.87
SFPQ-208	ENST00000485365	RPUSD4	Q96CM3	377 aa	Known RBP	3.38	□□□□□ -1.87
SFPQ-208	ENST00000485365	PHYHIPL	Q96FC7	376 aa		3.38	□□□□□ -1.87
SFPQ-208	ENST00000485365	LINC01587	Q99440	93 aa		3.38	□□□□□ -1.87
SFPQ-208	ENST00000485365	ATP5S	Q99766	215 aa		3.38	□□□□□ -1.87
SFPQ-208	ENST00000485365	NPCDR1	Q9BY65	106 aa		3.38	□□□□□ -1.87
SFPQ-208	ENST00000485365	C11orf1	Q9H5F2	150 aa		3.38	□□□□□ -1.87
SFPQ-208	ENST00000485365	CYTL1	Q9NRR1	136 aa		3.38	□□□□□ -1.87
SFPQ-208	ENST00000485365	RPH3AL	Q9UNE2	315 aa		3.38	□□□□□ -1.87
SFPQ-208	ENST00000485365	WDR83OS	Q9Y284	106 aa		3.38	□□□□□ -1.87
SFPQ-208	ENST00000485365	KLK5	Q9Y337	293 aa	Predicted RBP	3.38	□□□□□ -1.87
SFPQ-208	ENST00000485365	HLA-DRB4	X5D2U9	266 aa		3.38	□□□□□ -1.87
SFPQ-208	ENST00000485365	HUWE1	Q7Z6Z7	4374 aa	Known RBP	3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	TRAV8-2	A0A0B4J237	113 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365		A0A1W2PPV4	95 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	ZNF705E	A8MWA4	302 aa	Predicted RBP	3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365		H3BQ15	152 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	SOCS3	O14543	225 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	HMGB3	O15347	200 aa	Known RBP	3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	OR7C2	O60412	319 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	MPDU1	O75352	247 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	SNAPIN	O95295	136 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	HBE1	P02100	147 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	GIG44	P09565	113 aa	Predicted RBP	3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	OR10J4	P0C629	311 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	RBMY1A1	P0DJD3	496 aa	Known RBP	3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	RBMY1C	P0DJD4	496 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	MIF	P14174	115 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	PLP1	P60201	277 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	ERCC8	Q13216	396 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	PEA15	Q15121	130 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	RBMY1F	Q15415	496 aa	Known RBP	3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	RRN3P1	Q2M238	152 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	CEMP1	Q6PRD7	247 aa	Predicted RBP	3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	LCN15	Q6UWW0	184 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	MIR17HG	Q75NE6	70 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	BAP18	Q8IXM2	172 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	EXOC3-AS1	Q8N2X6	119 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	LINC00469	Q8N7U9	141 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	HSD17B11	Q8NBQ5	300 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	INO80E	Q8NBZ0	244 aa	Predicted RBP	3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	OR8A1	Q8NGG7	326 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	PAXX	Q9BUH6	204 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	PARD6G	Q9BYG4	376 aa	Predicted RBP	3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	WDR61	Q9GZS3	305 aa	Known RBP	3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	OR51M1	Q9H341	326 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	RFNG	Q9Y644	331 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	NBEAL2	Q6ZNJ1	2754 aa		3.37	□□□□□ -1.87
SFPQ-208	ENST00000485365	NUPR2	A6NF83	97 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	COLCA2	A8K830	154 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365		C9JQL5	133 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	SLC17A3	O00476	420 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	NBEAP1	P0C6P0	100 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	SFTA3	P0C7M3	94 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	SMIM6	P0DI80	62 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	DEFB130B	P0DP73	79 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	DEFB130A	P0DP74	79 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	AKR1C3	P42330	323 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	CSN1S1	P47710	185 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	RAB5B	P61020	215 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	RAN	P62826	216 aa	Known RBP	3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	VWC2	Q2TAL6	325 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	ACOT6	Q3I5F7	207 aa	Predicted RBP	3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	KIAA1644	Q3SXP7	199 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	RPP25L	Q8N5L8	163 aa	Known RBP	3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	HIST1H2BA	Q96A08	127 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	SLC50A1	Q9BRV3	221 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	SLC25A2	Q9BXI2	301 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	SEC11C	Q9BY50	192 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	WFDC1	Q9HC57	220 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	ZNF331	Q9NQX6	463 aa	Predicted RBP	3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	KCNIP2	Q9NS61	270 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	ZNF586	Q9NXT0	402 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	FUT9	Q9Y231	359 aa		3.36	□□□□□ -1.87
SFPQ-208	ENST00000485365	TRBV19	A0A075B6N1	114 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365		A0A087X0K7	114 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	DEFB131B	A0A096LNP1	70 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	TRAV12-3	A0A0B4J271	114 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	C1orf196	B1AJZ1	125 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365		M0R3E3	92 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	MRPS12	O15235	138 aa	Known RBP	3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	INS	P01308	110 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	IGKV2D-40	P01614	121 aa	Predicted RBP	3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	SPART-AS1	P0CW21	52 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	HIST1H1E	P10412	219 aa	Known RBP	3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	VPREB1	P12018	145 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	TSPO	P30536	169 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	RNASE4	P34096	147 aa	Known RBP	3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	LEP	P41159	167 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	CDKN1B	P46527	198 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	PPT1	P50897	306 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	TAS2R45	P59539	299 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	RAB2A	P61019	212 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	DAD1	P61803	113 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	UBE2L3	P68036	154 aa	Known RBP	3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	GUK1	Q16774	197 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	RPL7L1	Q6DKI1	246 aa	Known RBP	3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	NOTCH2NL	Q7Z3S9	236 aa		3.35	□□□□□ -1.87
SFPQ-208	ENST00000485365	C1orf158	Q8N1D5	194 aa		3.35	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms