RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 HBDP02042 147 aa0.11□□□□□ -2.39
PMS1-219ENST00000483293 CKS2P33552 79 aa0.11□□□□□ -2.39
PMS1-219ENST00000483293 IDO2Q6ZQW0 420 aa0.11□□□□□ -2.39
PMS1-219ENST00000483293 DEFB132Q7Z7B7 95 aa0.11□□□□□ -2.39
PMS1-219ENST00000483293 OTOSQ8NHW6 89 aa0.11□□□□□ -2.39
PMS1-219ENST00000483293 C19orf12Q9NSK7 152 aa0.11□□□□□ -2.39
PMS1-219ENST00000483293 DMBT1Q9UGM3 2413 aaPredicted RBP0.11□□□□□ -2.39
PMS1-219ENST00000483293 A2MP01023 1474 aa0.1□□□□□ -2.39
PMS1-219ENST00000483293 UNQ5815/PRO19632Q6UWF5 114 aa0.1□□□□□ -2.39
PMS1-219ENST00000483293 DMAC1Q96GE9 116 aa0.1□□□□□ -2.39
PMS1-219ENST00000483293 HELZP42694 1942 aaKnown RBP0.1□□□□□ -2.39
PMS1-219ENST00000483293 PBRM1Q86U86 1689 aa0.1□□□□□ -2.39
PMS1-219ENST00000483293 ZCCHC6Q5VYS8 1495 aaKnown RBP0.1□□□□□ -2.39
PMS1-219ENST00000483293 DLEC1Q9Y238 1755 aa0.09□□□□□ -2.39
PMS1-219ENST00000483293 IGHV1-24A0A0C4DH33 117 aa0.09□□□□□ -2.4
PMS1-219ENST00000483293 FABP1P07148 127 aa0.09□□□□□ -2.4
PMS1-219ENST00000483293 RHOHQ15669 191 aa0.09□□□□□ -2.4
PMS1-219ENST00000483293 TANC1Q9C0D5 1861 aa0.09□□□□□ -2.4
PMS1-219ENST00000483293 A0A1B0GV72 72 aa0.08□□□□□ -2.4
PMS1-219ENST00000483293 PCBD1P61457 104 aa0.08□□□□□ -2.4
PMS1-219ENST00000483293 LSM3P62310 102 aaKnown RBP0.08□□□□□ -2.4
PMS1-219ENST00000483293 ATG5Q9H1Y0 275 aa0.08□□□□□ -2.4
PMS1-219ENST00000483293 TMEM14BQ9NUH8 114 aa0.08□□□□□ -2.4
PMS1-219ENST00000483293 KDM6BO15054 1643 aa0.08□□□□□ -2.4
PMS1-219ENST00000483293 LRP5O75197 1615 aa0.08□□□□□ -2.4
PMS1-219ENST00000483293 SYNE2Q8WXH0 6885 aaKnown RBP0.08□□□□□ -2.4
PMS1-219ENST00000483293 LRP1Q07954 4544 aaKnown RBP0.07□□□□□ -2.4
PMS1-219ENST00000483293 TFF1P04155 84 aa0.07□□□□□ -2.4
PMS1-219ENST00000483293 OR5A2Q8NGI9 324 aa0.07□□□□□ -2.4
PMS1-219ENST00000483293 CPDO75976 1380 aa0.06□□□□□ -2.4
PMS1-219ENST00000483293 F5P12259 2224 aa0.06□□□□□ -2.4
PMS1-219ENST00000483293 CCKP06307 115 aa0.06□□□□□ -2.4
PMS1-219ENST00000483293 KLKP1Q107X0 134 aa0.06□□□□□ -2.4
PMS1-219ENST00000483293 SAMD13Q5VXD3 122 aa0.06□□□□□ -2.4
PMS1-219ENST00000483293 NAT14Q8WUY8 206 aa0.06□□□□□ -2.4
PMS1-219ENST00000483293 CCDC115Q96NT0 180 aa0.06□□□□□ -2.4
PMS1-219ENST00000483293 SPRR2GQ9BYE4 73 aa0.06□□□□□ -2.4
PMS1-219ENST00000483293 PROK2Q9HC23 129 aa0.06□□□□□ -2.4
PMS1-219ENST00000483293 FSIP2Q5CZC0 6907 aa0.06□□□□□ -2.4
PMS1-219ENST00000483293 ANK2Q01484 3957 aa0.05□□□□□ -2.4
PMS1-219ENST00000483293 TRAV17A0A0B4J275 112 aa0.05□□□□□ -2.4
PMS1-219ENST00000483293 ADCYAP1P18509 176 aa0.05□□□□□ -2.4
PMS1-219ENST00000483293 RPL22P35268 128 aaKnown RBP0.05□□□□□ -2.4
PMS1-219ENST00000483293 V9GYQ6 96 aa0.05□□□□□ -2.4
PMS1-219ENST00000483293 POLQO75417 2590 aa0.05□□□□□ -2.4
PMS1-219ENST00000483293 ASXL3Q9C0F0 2248 aa0.04□□□□□ -2.4
PMS1-219ENST00000483293 IFNA21P01568 189 aa0.04□□□□□ -2.4
PMS1-219ENST00000483293 SLC25A5P05141 298 aaKnown RBP0.04□□□□□ -2.4
PMS1-219ENST00000483293 POLR2JP52435 117 aaKnown RBP0.04□□□□□ -2.4
PMS1-219ENST00000483293 MAP2P11137 1827 aaKnown RBP0.03□□□□□ -2.4
PMS1-219ENST00000483293 TCRAP04437 139 aa0.03□□□□□ -2.4
PMS1-219ENST00000483293 MPC1LP0DKB6 136 aa0.03□□□□□ -2.4
PMS1-219ENST00000483293 TMEM128Q5BJH2 165 aa0.03□□□□□ -2.4
PMS1-219ENST00000483293 TMEM35BQ8NCS4 154 aa0.03□□□□□ -2.4
PMS1-219ENST00000483293 OR9Q1Q8NGQ5 310 aa0.03□□□□□ -2.4
PMS1-219ENST00000483293 KIDINS220Q9ULH0 1771 aa0.03□□□□□ -2.4
PMS1-219ENST00000483293 XIRP1Q702N8 1843 aaKnown RBP0.02□□□□□ -2.41
PMS1-219ENST00000483293 UQCRQO14949 82 aa0.02□□□□□ -2.41
PMS1-219ENST00000483293 OR4S1Q8NGB4 309 aa0.02□□□□□ -2.41
PMS1-219ENST00000483293 AHCTF1Q8WYP5 2266 aa0.02□□□□□ -2.41
PMS1-219ENST00000483293 KDM5CP41229 1560 aa0.02□□□□□ -2.41
PMS1-219ENST00000483293 S100GP29377 79 aa0.01□□□□□ -2.41
PMS1-219ENST00000483293 DSCR8Q96T75 97 aa0.01□□□□□ -2.41
PMS1-219ENST00000483293 SMPXQ9UHP9 88 aa0.01□□□□□ -2.41
PMS1-219ENST00000483293 HRNRQ86YZ3 2850 aaPredicted RBP0□□□□□ -2.41
PMS1-219ENST00000483293 BLMP54132 1417 aaPredicted RBP0□□□□□ -2.41
PMS1-219ENST00000483293 PSPHP78330 225 aa0□□□□□ -2.41
PMS1-219ENST00000483293 VMO1Q7Z5L0 202 aa0□□□□□ -2.41
PMS1-219ENST00000483293 PTPRGP23470 1445 aa-0.01□□□□□ -2.41
PMS1-219ENST00000483293 TRBV10-1A0A0K0K1A3 114 aa-0.01□□□□□ -2.41
PMS1-219ENST00000483293 MACF1Q9UPN3 7388 aaKnown RBP-0.01□□□□□ -2.41
PMS1-219ENST00000483293 WDR97A6NE52 1622 aa-0.02□□□□□ -2.41
PMS1-219ENST00000483293 OTOGQ6ZRI0 2925 aa-0.02□□□□□ -2.41
PMS1-219ENST00000483293 MED23Q9ULK4 1368 aa-0.02□□□□□ -2.41
PMS1-219ENST00000483293 A0A096LNT2 108 aa-0.02□□□□□ -2.41
PMS1-219ENST00000483293 C9JAW5 83 aa-0.02□□□□□ -2.41
PMS1-219ENST00000483293 SDC4P31431 198 aa-0.02□□□□□ -2.41
PMS1-219ENST00000483293 HSD17B12Q53GQ0 312 aa-0.02□□□□□ -2.41
PMS1-219ENST00000483293 TOMM20LQ6UXN7 152 aa-0.02□□□□□ -2.41
PMS1-219ENST00000483293 CADP27708 2225 aa-0.02□□□□□ -2.41
PMS1-219ENST00000483293 PNMA8CA0A1B0GUJ8 204 aa-0.03□□□□□ -2.41
PMS1-219ENST00000483293 TMEM141Q96I45 108 aa-0.03□□□□□ -2.41
PMS1-219ENST00000483293 UBR5O95071 2799 aaPredicted RBP-0.03□□□□□ -2.41
PMS1-219ENST00000483293 PGRMC1O00264 195 aaKnown RBP-0.04□□□□□ -2.42
PMS1-219ENST00000483293 NEFHP12036 1026 aa-0.04□□□□□ -2.42
PMS1-219ENST00000483293 TFAMQ00059 246 aaKnown RBP-0.04□□□□□ -2.42
PMS1-219ENST00000483293 CENPHQ9H3R5 247 aa-0.04□□□□□ -2.42
PMS1-219ENST00000483293 CALML5Q9NZT1 146 aa-0.04□□□□□ -2.42
PMS1-219ENST00000483293 TNS1Q9HBL0 1735 aaKnown RBP-0.04□□□□□ -2.42
PMS1-219ENST00000483293 SSPOA2VEC9 5147 aa-0.05□□□□□ -2.42
PMS1-219ENST00000483293 SPINK1P00995 79 aa-0.05□□□□□ -2.42
PMS1-219ENST00000483293 MT-ND4LP03901 98 aa-0.05□□□□□ -2.42
PMS1-219ENST00000483293 HIST1H1BP16401 226 aaKnown RBP-0.05□□□□□ -2.42
PMS1-219ENST00000483293 SLC35B3Q9H1N7 401 aa-0.05□□□□□ -2.42
PMS1-219ENST00000483293 METTL1Q9UBP6 276 aaKnown RBP-0.05□□□□□ -2.42
PMS1-219ENST00000483293 COL7A1Q02388 2944 aa-0.05□□□□□ -2.42
PMS1-219ENST00000483293 OVOS2A0A0G2JMS6 1433 aa-0.05□□□□□ -2.42
PMS1-219ENST00000483293 CACNA1CQ13936 2221 aa-0.06□□□□□ -2.42
PMS1-219ENST00000483293 J3KT08 172 aa-0.06□□□□□ -2.42
PMS1-219ENST00000483293 APOC1P02654 83 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms