RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 C18orf15Q96N68 181 aa3.31□□□□□ -1.88
HDAC9-224ENST00000483142 C8orf49Q96NF6 230 aa3.31□□□□□ -1.88
HDAC9-224ENST00000483142 ASCL2Q99929 193 aa3.31□□□□□ -1.88
HDAC9-224ENST00000483142 NDUFAF3Q9BU61 184 aa3.31□□□□□ -1.88
HDAC9-224ENST00000483142 SEC11CQ9BY50 192 aa3.31□□□□□ -1.88
HDAC9-224ENST00000483142 TUBA4BQ9H853 241 aa3.31□□□□□ -1.88
HDAC9-224ENST00000483142 BIN3Q9NQY0 253 aa3.31□□□□□ -1.88
HDAC9-224ENST00000483142 C11orf21Q9P2W6 132 aa3.31□□□□□ -1.88
HDAC9-224ENST00000483142 NAT8Q9UHE5 227 aa3.31□□□□□ -1.88
HDAC9-224ENST00000483142 GOLT1BQ9Y3E0 138 aa3.31□□□□□ -1.88
HDAC9-224ENST00000483142 MEGF8Q7Z7M0 2845 aa3.31□□□□□ -1.88
HDAC9-224ENST00000483142 DNAH9Q9NYC9 4486 aa3.31□□□□□ -1.88
HDAC9-224ENST00000483142 TRGV11A0A075B6L2 103 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 TRAV12-2A0A075B6T6 113 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 IGHV1OR15-1A0A075B7D0 117 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 IGKV3D-20A0A0C4DH25 116 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 TEX48A0A1B0GUV7 120 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 TMEM189A5PLL7 270 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 PGPEP1LA6NFU8 196 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 ZNF727A8MUV8 499 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 SPRY2O43597 315 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 SNAI2O43623 268 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 SH2D1AO60880 128 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 PRB2P02812 416 aaPredicted RBP3.3□□□□□ -1.88
HDAC9-224ENST00000483142 TYMSP04818 313 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 IGLC6P0CF74 106 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 CTRLP40313 264 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 CRIP1P50238 77 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 TCL1AP56279 114 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 RPL23P62829 140 aaKnown RBP3.3□□□□□ -1.88
HDAC9-224ENST00000483142 DEFA6Q01524 100 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 DEFB135Q30KP9 77 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 SOHLH1Q5JUK2 328 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 PIK3CD-AS1Q5SR53 167 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 FAM162BQ5T6X4 162 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 ZNF493Q6ZR52 646 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 SBSPONQ8IVN8 264 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 C16orf74Q96GX8 76 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 KCNS1Q96KK3 526 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 SGK494Q96LW2 274 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 C9orf85Q96MD7 179 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 RCHY1Q96PM5 261 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 OVOL2Q9BRP0 275 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 NIPSNAP3BQ9BS92 247 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 CNFNQ9BYD5 112 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 SDF2L1Q9HCN8 221 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 SCRT2Q9NQ03 307 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 OSTCQ9NRP0 149 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 XCL2Q9UBD3 114 aa3.3□□□□□ -1.88
HDAC9-224ENST00000483142 HUWE1Q7Z6Z7 4374 aaKnown RBP3.29□□□□□ -1.88
HDAC9-224ENST00000483142 TRAV12-3A0A0B4J271 114 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 IGHV3-16A0A0C4DH30 117 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 FAM231BA6NCW3 169 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 FABP5P3A8MUU1 101 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 KRBOX1C9JBD0 128 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 IGKV3-20P01619 116 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 GPX1P07203 203 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 OR5AL1P0C617 328 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 NHLRC4P0CG21 123 aaPredicted RBP3.29□□□□□ -1.88
HDAC9-224ENST00000483142 PRB4P10163 310 aaPredicted RBP3.29□□□□□ -1.88
HDAC9-224ENST00000483142 FXYD7P58549 80 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 RPS20P60866 119 aaKnown RBP3.29□□□□□ -1.88
HDAC9-224ENST00000483142 ZNF415Q09FC8 603 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 ZNF575Q86XF7 245 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 NHLRC2Q8NBF2 726 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 OCC1Q8TAD7 63 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 GFRA4Q9GZZ7 299 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 RPP21Q9H633 154 aaKnown RBP3.29□□□□□ -1.88
HDAC9-224ENST00000483142 EDA2RQ9HAV5 297 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 IL36BQ9NZH7 164 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 V9GYV3 84 aa3.29□□□□□ -1.88
HDAC9-224ENST00000483142 TENM3Q9P273 2699 aa3.28□□□□□ -1.88
HDAC9-224ENST00000483142 IGHV4-4A0A075B6R2 117 aa3.28□□□□□ -1.88
HDAC9-224ENST00000483142 A0A087WWC5 75 aa3.28□□□□□ -1.88
HDAC9-224ENST00000483142 IGHV4-28A0A0C4DH34 117 aa3.28□□□□□ -1.88
HDAC9-224ENST00000483142 PRSS29PA6NIE9 313 aa3.28□□□□□ -1.88
HDAC9-224ENST00000483142 B4DEV8 164 aa3.28□□□□□ -1.88
HDAC9-224ENST00000483142 P01737 135 aa3.28□□□□□ -1.88
HDAC9-224ENST00000483142 RNASE3P12724 160 aaKnown RBP3.28□□□□□ -1.88
HDAC9-224ENST00000483142 FOXA3P55318 350 aaPredicted RBP3.28□□□□□ -1.88
HDAC9-224ENST00000483142 DAZ2Q13117 558 aaKnown RBP3.28□□□□□ -1.88
HDAC9-224ENST00000483142 RHEBQ15382 184 aa3.28□□□□□ -1.88
HDAC9-224ENST00000483142 TMEM241Q24JQ0 296 aa3.28□□□□□ -1.88
HDAC9-224ENST00000483142 RRN3P1Q2M238 152 aa3.28□□□□□ -1.88
HDAC9-224ENST00000483142 Q6ZQT7 251 aa3.28□□□□□ -1.88
HDAC9-224ENST00000483142 SFRP2Q96HF1 295 aa3.28□□□□□ -1.88
HDAC9-224ENST00000483142 RETNQ9HD89 108 aa3.28□□□□□ -1.88
HDAC9-224ENST00000483142 STAB2Q8WWQ8 2551 aa3.27□□□□□ -1.89
HDAC9-224ENST00000483142 LYRM9A8MSI8 78 aa3.27□□□□□ -1.89
HDAC9-224ENST00000483142 F8W036 122 aa3.27□□□□□ -1.89
HDAC9-224ENST00000483142 PPP1R2P9O14990 202 aa3.27□□□□□ -1.89
HDAC9-224ENST00000483142 SPINK4O60575 86 aa3.27□□□□□ -1.89
HDAC9-224ENST00000483142 MGST1P10620 155 aaKnown RBP3.27□□□□□ -1.89
HDAC9-224ENST00000483142 RNASE4P34096 147 aaKnown RBP3.27□□□□□ -1.89
HDAC9-224ENST00000483142 ASIPP42127 132 aa3.27□□□□□ -1.89
HDAC9-224ENST00000483142 RPL19P84098 196 aaKnown RBP3.27□□□□□ -1.89
HDAC9-224ENST00000483142 OR5I1Q13606 314 aa3.27□□□□□ -1.89
HDAC9-224ENST00000483142 ADIRFQ15847 76 aa3.27□□□□□ -1.89
HDAC9-224ENST00000483142 LGALS9BQ3B8N2 356 aa3.27□□□□□ -1.89
HDAC9-224ENST00000483142 MUC21Q5SSG8 566 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms