RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 ATP6V0E1O15342 81 aa13.87□□□□□ -0.19
SSR4-209ENST00000482902 PPIFP30405 207 aaKnown RBP13.87□□□□□ -0.19
SSR4-209ENST00000482902 MORN3Q6PF18 240 aaPredicted RBP13.87□□□□□ -0.19
SSR4-209ENST00000482902 UCNP55089 124 aa13.86□□□□□ -0.19
SSR4-209ENST00000482902 SRSF2Q01130 221 aaKnown RBP13.86□□□□□ -0.19
SSR4-209ENST00000482902 FOXI1Q12951 378 aa13.86□□□□□ -0.19
SSR4-209ENST00000482902 C8orf86Q6ZUL3 223 aa13.86□□□□□ -0.19
SSR4-209ENST00000482902 C1QTNF4Q9BXJ3 329 aa13.86□□□□□ -0.19
SSR4-209ENST00000482902 ZFAND3Q9H8U3 227 aa13.86□□□□□ -0.19
SSR4-209ENST00000482902 FABP5P3A8MUU1 101 aa13.86□□□□□ -0.19
SSR4-209ENST00000482902 RNF182Q8N6D2 247 aa13.86□□□□□ -0.19
SSR4-209ENST00000482902 A0A087WX48 190 aa13.85□□□□□ -0.19
SSR4-209ENST00000482902 IGHV3-66A0A0C4DH42 116 aa13.85□□□□□ -0.19
SSR4-209ENST00000482902 LINC01619G3V211 115 aa13.85□□□□□ -0.19
SSR4-209ENST00000482902 BUB3O43684 328 aa13.85□□□□□ -0.19
SSR4-209ENST00000482902 SMCPP49901 116 aaPredicted RBP13.85□□□□□ -0.19
SSR4-209ENST00000482902 UBE2E1P51965 193 aa13.85□□□□□ -0.19
SSR4-209ENST00000482902 AJUBAQ96IF1 538 aa13.85□□□□□ -0.19
SSR4-209ENST00000482902 SYT8Q8NBV8 401 aa13.85□□□□□ -0.19
SSR4-209ENST00000482902 WNK2Q9Y3S1 2297 aa13.85□□□□□ -0.19
SSR4-209ENST00000482902 CFAP126Q5VTH2 177 aa13.84□□□□□ -0.19
SSR4-209ENST00000482902 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.84□□□□□ -0.19
SSR4-209ENST00000482902 ATP6V0E2Q8NHE4 81 aa13.84□□□□□ -0.19
SSR4-209ENST00000482902 ZNF418Q8TF45 676 aaPredicted RBP13.84□□□□□ -0.19
SSR4-209ENST00000482902 SAA4P35542 130 aa13.84□□□□□ -0.19
SSR4-209ENST00000482902 FHL3Q13643 280 aa13.84□□□□□ -0.19
SSR4-209ENST00000482902 CLEC19AQ6UXS0 136 aa13.84□□□□□ -0.19
SSR4-209ENST00000482902 IGHV3OR16-13A0A075B7E8 117 aa13.83□□□□□ -0.19
SSR4-209ENST00000482902 IGHV3-74A0A0B4J1X5 117 aa13.83□□□□□ -0.19
SSR4-209ENST00000482902 G3V318 75 aa13.83□□□□□ -0.19
SSR4-209ENST00000482902 LCNL1Q6ZST4 164 aa13.83□□□□□ -0.19
SSR4-209ENST00000482902 MED13LQ71F56 2210 aa13.83□□□□□ -0.2
SSR4-209ENST00000482902 PLNP26678 52 aa13.83□□□□□ -0.2
SSR4-209ENST00000482902 IL17RELQ6ZVW7 336 aa13.83□□□□□ -0.2
SSR4-209ENST00000482902 MYOZ3Q8TDC0 251 aa13.83□□□□□ -0.2
SSR4-209ENST00000482902 CCDC140Q96MF4 163 aa13.83□□□□□ -0.2
SSR4-209ENST00000482902 CLPSL1A2RUU4 121 aa13.82□□□□□ -0.2
SSR4-209ENST00000482902 LINC01548A6NM66 108 aa13.82□□□□□ -0.2
SSR4-209ENST00000482902 NFE4Q86UQ8 179 aa13.82□□□□□ -0.2
SSR4-209ENST00000482902 UBTD1Q9HAC8 227 aa13.82□□□□□ -0.2
SSR4-209ENST00000482902 IGF2RP11717 2491 aa13.82□□□□□ -0.2
SSR4-209ENST00000482902 SPINK8P0C7L1 97 aa13.82□□□□□ -0.2
SSR4-209ENST00000482902 LAGE3Q14657 143 aa13.82□□□□□ -0.2
SSR4-209ENST00000482902 KLK9Q2XQG4 91 aa13.82□□□□□ -0.2
SSR4-209ENST00000482902 NRACQ8N912 160 aa13.82□□□□□ -0.2
SSR4-209ENST00000482902 SLC50A1Q9BRV3 221 aa13.82□□□□□ -0.2
SSR4-209ENST00000482902 KLK9Q9UKQ9 250 aa13.82□□□□□ -0.2
SSR4-209ENST00000482902 CYSLTR1Q9Y271 337 aa13.82□□□□□ -0.2
SSR4-209ENST00000482902 ATRXP46100 2492 aa13.81□□□□□ -0.2
SSR4-209ENST00000482902 RBAKDNA6NC62 111 aa13.81□□□□□ -0.2
SSR4-209ENST00000482902 MT-ATP8P03928 68 aa13.81□□□□□ -0.2
SSR4-209ENST00000482902 MYMXA0A1B0GTQ4 84 aa13.81□□□□□ -0.2
SSR4-209ENST00000482902 TRGV3P03979 118 aa13.81□□□□□ -0.2
SSR4-209ENST00000482902 EFNA4P52798 201 aa13.81□□□□□ -0.2
SSR4-209ENST00000482902 PGPEP1Q9NXJ5 209 aa13.81□□□□□ -0.2
SSR4-209ENST00000482902 IGHV3-49A0A0A0MS15 119 aa13.8□□□□□ -0.2
SSR4-209ENST00000482902 HOXA3O43365 443 aaPredicted RBP13.8□□□□□ -0.2
SSR4-209ENST00000482902 EEF1AKMT3Q96AZ1 226 aa13.8□□□□□ -0.2
SSR4-209ENST00000482902 AGPAT4-IT1Q9H0P7 198 aa13.8□□□□□ -0.2
SSR4-209ENST00000482902 CENPVL3A0A0U1RRI6 287 aa13.79□□□□□ -0.2
SSR4-209ENST00000482902 XGP55808 180 aa13.79□□□□□ -0.2
SSR4-209ENST00000482902 Q6ZUT4 128 aa13.79□□□□□ -0.2
SSR4-209ENST00000482902 SVEP1Q4LDE5 3571 aa13.79□□□□□ -0.2
SSR4-209ENST00000482902 OR11H12B2RN74 326 aa13.79□□□□□ -0.2
SSR4-209ENST00000482902 OR11H1Q8NG94 326 aa13.79□□□□□ -0.2
SSR4-209ENST00000482902 OR11H2Q8NH07 326 aa13.79□□□□□ -0.2
SSR4-209ENST00000482902 DLX4Q92988 240 aaPredicted RBP13.79□□□□□ -0.2
SSR4-209ENST00000482902 BPESC1Q9GZL8 116 aa13.79□□□□□ -0.2
SSR4-209ENST00000482902 TRAV26-2A0A0B4J265 109 aa13.78□□□□□ -0.2
SSR4-209ENST00000482902 IGKV3D-20A0A0C4DH25 116 aa13.78□□□□□ -0.2
SSR4-209ENST00000482902 F8VRH5 84 aa13.78□□□□□ -0.2
SSR4-209ENST00000482902 LGALS1P09382 135 aaKnown RBP13.78□□□□□ -0.2
SSR4-209ENST00000482902 LMO4P61968 165 aa13.78□□□□□ -0.2
SSR4-209ENST00000482902 GLMPQ8WWB7 406 aa13.78□□□□□ -0.2
SSR4-209ENST00000482902 METTL26Q96S19 204 aa13.78□□□□□ -0.2
SSR4-209ENST00000482902 TRAV8-2A0A0B4J237 113 aa13.78□□□□□ -0.2
SSR4-209ENST00000482902 C11orf21Q9P2W6 132 aa13.78□□□□□ -0.2
SSR4-209ENST00000482902 TRAV12-1A0A0B4J245 112 aa13.77□□□□□ -0.21
SSR4-209ENST00000482902 H7C1H1 209 aa13.77□□□□□ -0.21
SSR4-209ENST00000482902 NPFFO15130 113 aa13.77□□□□□ -0.21
SSR4-209ENST00000482902 TSPAN13O95857 204 aa13.77□□□□□ -0.21
SSR4-209ENST00000482902 TRBV7-1A0A0A6YYK4 115 aa13.76□□□□□ -0.21
SSR4-209ENST00000482902 TMEM78Q5T7P6 136 aa13.76□□□□□ -0.21
SSR4-209ENST00000482902 COL6A6A6NMZ7 2263 aa13.76□□□□□ -0.21
SSR4-209ENST00000482902 C5orf56Q8N8D9 126 aa13.75□□□□□ -0.21
SSR4-209ENST00000482902 CARD19Q96LW7 228 aa13.75□□□□□ -0.21
SSR4-209ENST00000482902 CACNA1BQ00975 2339 aa13.75□□□□□ -0.21
SSR4-209ENST00000482902 LINC01549A6NIU2 74 aa13.75□□□□□ -0.21
SSR4-209ENST00000482902 UBE2D1P51668 147 aa13.75□□□□□ -0.21
SSR4-209ENST00000482902 TMEM219Q86XT9 240 aa13.75□□□□□ -0.21
SSR4-209ENST00000482902 PTH2Q96A98 100 aa13.74□□□□□ -0.21
SSR4-209ENST00000482902 SPTBN1Q01082 2364 aaKnown RBP13.74□□□□□ -0.21
SSR4-209ENST00000482902 GATA3P23771 443 aa13.74□□□□□ -0.21
SSR4-209ENST00000482902 ZFP2Q6ZN57 461 aa13.74□□□□□ -0.21
SSR4-209ENST00000482902 RNF183Q96D59 192 aa13.74□□□□□ -0.21
SSR4-209ENST00000482902 MRPL53Q96EL3 112 aaKnown RBP13.74□□□□□ -0.21
SSR4-209ENST00000482902 ASH1LQ9NR48 2969 aaKnown RBP13.74□□□□□ -0.21
SSR4-209ENST00000482902 ERG28Q9UKR5 140 aa13.74□□□□□ -0.21
SSR4-209ENST00000482902 PSMB2P49721 201 aa13.73□□□□□ -0.21
SSR4-209ENST00000482902 UBE2D3P61077 147 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 233.4 ms