RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 TDRG1Q3Y452 100 aa12.93□□□□□ -0.34
SMIM4-204ENST00000482728 SLC51BQ86UW2 128 aa12.93□□□□□ -0.34
SMIM4-204ENST00000482728 UBE2DNLQ8IWF7 75 aa12.93□□□□□ -0.34
SMIM4-204ENST00000482728 MDFICQ9P1T7 246 aa12.93□□□□□ -0.34
SMIM4-204ENST00000482728 ARL2-SNX15V9GYD0 113 aa12.93□□□□□ -0.34
SMIM4-204ENST00000482728 GNRH2O43555 120 aa12.92□□□□□ -0.34
SMIM4-204ENST00000482728 POM121L12Q8N7R1 296 aa12.92□□□□□ -0.34
SMIM4-204ENST00000482728 TCEAL7Q9BRU2 100 aa12.92□□□□□ -0.34
SMIM4-204ENST00000482728 SPXQ9BT56 116 aa12.92□□□□□ -0.34
SMIM4-204ENST00000482728 SDF2L1Q9HCN8 221 aa12.92□□□□□ -0.34
SMIM4-204ENST00000482728 MRPL16Q9NX20 251 aaKnown RBP12.92□□□□□ -0.34
SMIM4-204ENST00000482728 TEX46H3BTG2 121 aa12.91□□□□□ -0.34
SMIM4-204ENST00000482728 NUDT3O95989 172 aa12.91□□□□□ -0.34
SMIM4-204ENST00000482728 ZNF80P51504 273 aaPredicted RBP12.91□□□□□ -0.34
SMIM4-204ENST00000482728 UBE2G1P62253 170 aa12.91□□□□□ -0.34
SMIM4-204ENST00000482728 C18orf15Q96N68 181 aa12.91□□□□□ -0.34
SMIM4-204ENST00000482728 MUC4Q99102 2169 aa12.91□□□□□ -0.34
SMIM4-204ENST00000482728 TRAV26-1A0A087WT03 109 aa12.9□□□□□ -0.34
SMIM4-204ENST00000482728 PFN1P07737 140 aaKnown RBP12.9□□□□□ -0.34
SMIM4-204ENST00000482728 HOXA5P20719 270 aa12.89□□□□□ -0.35
SMIM4-204ENST00000482728 FMC1Q96HJ9 113 aa12.89□□□□□ -0.35
SMIM4-204ENST00000482728 ZFP30Q9Y2G7 519 aa12.89□□□□□ -0.35
SMIM4-204ENST00000482728 TRAV1-1A0A0B4J248 108 aa12.88□□□□□ -0.35
SMIM4-204ENST00000482728 IGHV3-16A0A0C4DH30 117 aa12.88□□□□□ -0.35
SMIM4-204ENST00000482728 A0A0J9YY99 117 aa12.88□□□□□ -0.35
SMIM4-204ENST00000482728 FABP5P3A8MUU1 101 aa12.88□□□□□ -0.35
SMIM4-204ENST00000482728 TYMSP04818 313 aa12.88□□□□□ -0.35
SMIM4-204ENST00000482728 AKR1C3P42330 323 aa12.88□□□□□ -0.35
SMIM4-204ENST00000482728 SULT1A2P50226 295 aa12.88□□□□□ -0.35
SMIM4-204ENST00000482728 RNF212Q495C1 297 aa12.88□□□□□ -0.35
SMIM4-204ENST00000482728 Q86TA4 180 aa12.88□□□□□ -0.35
SMIM4-204ENST00000482728 C9orf62Q8N4C0 152 aa12.88□□□□□ -0.35
SMIM4-204ENST00000482728 NACAE9PAV3 2078 aa12.87□□□□□ -0.35
SMIM4-204ENST00000482728 A0A1B0GVG6 124 aa12.87□□□□□ -0.35
SMIM4-204ENST00000482728 IGHV3-53P01767 116 aa12.87□□□□□ -0.35
SMIM4-204ENST00000482728 C11orf21Q9P2W6 132 aa12.87□□□□□ -0.35
SMIM4-204ENST00000482728 M0R2P5 195 aa12.86□□□□□ -0.35
SMIM4-204ENST00000482728 S100A9P06702 114 aaKnown RBP12.86□□□□□ -0.35
SMIM4-204ENST00000482728 RASL10AQ92737 203 aa12.86□□□□□ -0.35
SMIM4-204ENST00000482728 MANBALQ9NQG1 85 aa12.86□□□□□ -0.35
SMIM4-204ENST00000482728 GNG13Q9P2W3 67 aa12.86□□□□□ -0.35
SMIM4-204ENST00000482728 TRBV6-1A0A0K0K1D8 114 aa12.85□□□□□ -0.35
SMIM4-204ENST00000482728 H3BNG1 76 aa12.85□□□□□ -0.35
SMIM4-204ENST00000482728 CCL18P55774 89 aa12.85□□□□□ -0.35
SMIM4-204ENST00000482728 CCL20P78556 96 aa12.85□□□□□ -0.35
SMIM4-204ENST00000482728 SLAQ13239 276 aa12.85□□□□□ -0.35
SMIM4-204ENST00000482728 ORM1P02763 201 aa12.84□□□□□ -0.35
SMIM4-204ENST00000482728 TRGV4A0A0C4DH28 118 aa12.83□□□□□ -0.36
SMIM4-204ENST00000482728 SCO2A0A1W2PP80 73 aa12.83□□□□□ -0.36
SMIM4-204ENST00000482728 PAX4O43316 350 aa12.83□□□□□ -0.36
SMIM4-204ENST00000482728 FAM162BQ5T6X4 162 aa12.83□□□□□ -0.36
SMIM4-204ENST00000482728 ZC2HC1AQ96GY0 325 aa12.83□□□□□ -0.36
SMIM4-204ENST00000482728 HHLA3Q9XRX5 114 aa12.83□□□□□ -0.36
SMIM4-204ENST00000482728 HYDINQ4G0P3 5121 aa12.83□□□□□ -0.36
SMIM4-204ENST00000482728 VPS13DQ5THJ4 4388 aa12.83□□□□□ -0.36
SMIM4-204ENST00000482728 C9JCJ5 164 aa12.82□□□□□ -0.36
SMIM4-204ENST00000482728 LTAP01374 205 aa12.82□□□□□ -0.36
SMIM4-204ENST00000482728 S100A4P26447 101 aaKnown RBP12.82□□□□□ -0.36
SMIM4-204ENST00000482728 FAM3BP58499 235 aaPredicted RBP12.82□□□□□ -0.36
SMIM4-204ENST00000482728 ZNF876PQ49A33 203 aa12.82□□□□□ -0.36
SMIM4-204ENST00000482728 COX8CQ7Z4L0 72 aa12.82□□□□□ -0.36
SMIM4-204ENST00000482728 OR4C5Q8NGB2 326 aa12.82□□□□□ -0.36
SMIM4-204ENST00000482728 VSIG2Q96IQ7 327 aa12.82□□□□□ -0.36
SMIM4-204ENST00000482728 TXNDC17Q9BRA2 123 aa12.82□□□□□ -0.36
SMIM4-204ENST00000482728 PRO0255Q9UI72 69 aa12.82□□□□□ -0.36
SMIM4-204ENST00000482728 IFNA1P01562 189 aa12.81□□□□□ -0.36
SMIM4-204ENST00000482728 CRIP1P50238 77 aa12.81□□□□□ -0.36
SMIM4-204ENST00000482728 FHL2Q14192 279 aa12.81□□□□□ -0.36
SMIM4-204ENST00000482728 BAGE2Q86Y30 109 aa12.81□□□□□ -0.36
SMIM4-204ENST00000482728 ZNF479Q96JC4 524 aa12.81□□□□□ -0.36
SMIM4-204ENST00000482728 TRAV4A0A0B4J268 109 aa12.8□□□□□ -0.36
SMIM4-204ENST00000482728 IGKV3D-20A0A0C4DH25 116 aa12.8□□□□□ -0.36
SMIM4-204ENST00000482728 B4DEV8 164 aa12.8□□□□□ -0.36
SMIM4-204ENST00000482728 M0R2N4 97 aa12.8□□□□□ -0.36
SMIM4-204ENST00000482728 SH2D1AO60880 128 aa12.8□□□□□ -0.36
SMIM4-204ENST00000482728 SFTA3P0C7M3 94 aa12.8□□□□□ -0.36
SMIM4-204ENST00000482728 NKX2-5P52952 324 aaPredicted RBP12.8□□□□□ -0.36
SMIM4-204ENST00000482728 KMT2AQ03164 3969 aa12.79□□□□□ -0.36
SMIM4-204ENST00000482728 IGLV2-18A0A075B6J9 118 aa12.79□□□□□ -0.36
SMIM4-204ENST00000482728 M0R036 132 aa12.79□□□□□ -0.36
SMIM4-204ENST00000482728 ASIPP42127 132 aa12.79□□□□□ -0.36
SMIM4-204ENST00000482728 CRYBA4P53673 196 aa12.79□□□□□ -0.36
SMIM4-204ENST00000482728 NHLRC2Q8NBF2 726 aa12.79□□□□□ -0.36
SMIM4-204ENST00000482728 C9orf85Q96MD7 179 aa12.79□□□□□ -0.36
SMIM4-204ENST00000482728 RNASE3P12724 160 aaKnown RBP12.78□□□□□ -0.36
SMIM4-204ENST00000482728 ZNF674Q2M3X9 581 aa12.78□□□□□ -0.36
SMIM4-204ENST00000482728 ALKAL2Q6UX46 152 aa12.78□□□□□ -0.36
SMIM4-204ENST00000482728 LINC00588Q9Y4M8 146 aa12.78□□□□□ -0.36
SMIM4-204ENST00000482728 ICOSQ9Y6W8 199 aa12.78□□□□□ -0.36
SMIM4-204ENST00000482728 A0A096LPF7 62 aa12.77□□□□□ -0.37
SMIM4-204ENST00000482728 KRBOX1C9JBD0 128 aa12.77□□□□□ -0.37
SMIM4-204ENST00000482728 RPL35P42766 123 aaKnown RBP12.77□□□□□ -0.37
SMIM4-204ENST00000482728 BLOC1S1P78537 153 aa12.77□□□□□ -0.37
SMIM4-204ENST00000482728 MEF2BQ02080 365 aaPredicted RBP12.77□□□□□ -0.37
SMIM4-204ENST00000482728 PTH2Q96A98 100 aa12.77□□□□□ -0.37
SMIM4-204ENST00000482728 PDE6DO43924 150 aa12.76□□□□□ -0.37
SMIM4-204ENST00000482728 TAGLN2P37802 199 aaKnown RBP12.76□□□□□ -0.37
SMIM4-204ENST00000482728 MRPL23Q16540 153 aaKnown RBP12.76□□□□□ -0.37
SMIM4-204ENST00000482728 ESRGQ1W209 222 aa12.76□□□□□ -0.37
SMIM4-204ENST00000482728 C11orf52Q96A22 123 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms