RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	TSTD1	Q8NFU3	115 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	DYNLRB2	Q8TF09	96 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	LPAR5	Q9H1C0	372 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	TPT1P8	Q9HAU6	139 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	CCDC167	Q9P0B6	97 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	DNAJC15	Q9Y5T4	150 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	LAMB4	A4D0S4	1761 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	FRMPD1	Q5SYB0	1578 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	CPAMD8	Q8IZJ3	1885 aa		0.44	□□□□□ -2.34
CCNL1-223	ENST00000481173	RP1	P56715	2156 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	FREM1	Q5H8C1	2179 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	BAZ2B	Q9UIF8	2168 aa	Known RBP	0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	HEATR5B	Q9P2D3	2071 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	TRAV12-2	A0A075B6T6	113 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173		A0A1B0GW64	132 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	TCRBV3S1	A0A5B6	114 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173		M0R2P5	195 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	IFNA17	P01571	189 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	CD3D	P04234	171 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	TSPAN19	P0C672	248 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	SELENOW	P63302	87 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	SPANXN1	Q5VSR9	72 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	CSAG1	Q6PB30	78 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	SBSPON	Q8IVN8	264 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	C1orf54	Q8WWF1	131 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	CCL19	Q99731	98 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	LIMD2	Q9BT23	127 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	TMEM191A	Q9H0A3	160 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	BET1L	Q9NYM9	111 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	SOGA1	O94964	1423 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	ERBIN	Q96RT1	1412 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	KDM5C	P41229	1560 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	ARFGEF3	Q5TH69	2177 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	ADGB	Q8N7X0	1667 aa		0.43	□□□□□ -2.34
CCNL1-223	ENST00000481173	COL1A1	P02452	1464 aa	Predicted RBP	0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	CACNA1B	Q00975	2339 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	DOCK3	Q8IZD9	2030 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	UNC13A	Q9UPW8	1703 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	NAIP	Q13075	1403 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	RBAKDN	A6NC62	111 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	FAM25A	B3EWG3	89 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	FAM25C	B3EWG5	89 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	FAM25G	B3EWG6	89 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	ZNF670-ZNF695	F2Z2N8	137 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	FXYD1	O00168	92 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	SNCG	O76070	127 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	IGKC	P01834	107 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	IGLC6	P0CF74	106 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	SMIM6	P0DI80	62 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	PYY	P10082	97 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	KLKP1	Q107X0	134 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	SPCS2	Q15005	226 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	GLYATL3	Q5SZD4	288 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	FAM74A4	Q5TZK3	123 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173		Q5XG85	94 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	C10orf99	Q6UWK7	81 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	CYP2G1P	Q6ZSU1	146 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	C4orf33	Q8N1A6	199 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	VSTM2A	Q8TAG5	236 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	ARL11	Q969Q4	196 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	TMEM141	Q96I45	108 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	FAM107B	Q9H098	131 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	RERGL	Q9H628	205 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	RPRM	Q9NS64	109 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	MDN1	Q9NU22	5596 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	ANAPC1	Q9H1A4	1944 aa		0.42	□□□□□ -2.34
CCNL1-223	ENST00000481173	OBSL1	O75147	1896 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	ZNF106	Q9H2Y7	1883 aa	Known RBP	0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	PTPRB	P23467	1997 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	MYH11	P35749	1972 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	TECTA	O75443	2155 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	INTS1	Q8N201	2190 aa	Known RBP	0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	LOC101927531	A0A1B0GV80	90 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	EFCAB10	A6NFE3	127 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	NPFF	O15130	113 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	IL5	P05113	134 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	SPINT3	P49223	89 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	RPS25	P62851	125 aa	Known RBP	0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	SSBP1	Q04837	148 aa	Known RBP	0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	ZNF56	Q15929	161 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	DEFB132	Q7Z7B7	95 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173		Q8N6K4	173 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	SPTSSA	Q969W0	71 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	DSCR8	Q96T75	97 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	TMEM14B	Q9NUH8	114 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	SCP2D1	Q9UJQ7	156 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	LSM2	Q9Y333	95 aa	Known RBP	0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	STRC	Q7RTU9	1775 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	FREM3	P0C091	2139 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	NUP98	P52948	1817 aa		0.41	□□□□□ -2.34
CCNL1-223	ENST00000481173	MED12	Q93074	2177 aa		0.4	□□□□□ -2.34
CCNL1-223	ENST00000481173	COL4A5	P29400	1685 aa		0.4	□□□□□ -2.34
CCNL1-223	ENST00000481173	DAPK1	P53355	1430 aa		0.4	□□□□□ -2.34
CCNL1-223	ENST00000481173	ARHGAP31	Q2M1Z3	1444 aa		0.4	□□□□□ -2.34
CCNL1-223	ENST00000481173	NUMA1	Q14980	2115 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	MGAM	O43451	1857 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	FAM236A	A0A1B0GUQ0	79 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	FAM236B	A0A1B0GV22	79 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173		F2Z2F3	143 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	NDUFB6	O95139	128 aa		0.4	□□□□□ -2.35

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms