RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 VPS13DQ5THJ4 4388 aa8.52□□□□□ -1.04
CCM2-212ENST00000480382 TRGV11A0A075B6L2 103 aa8.52□□□□□ -1.05
CCM2-212ENST00000480382 TRGV1A0A0A0MS02 117 aa8.52□□□□□ -1.05
CCM2-212ENST00000480382 TRAV1-1A0A0B4J248 108 aa8.52□□□□□ -1.05
CCM2-212ENST00000480382 ATP5G1P05496 136 aa8.52□□□□□ -1.05
CCM2-212ENST00000480382 TCTAP57738 103 aa8.52□□□□□ -1.05
CCM2-212ENST00000480382 SAPCD1Q5SSQ6 148 aa8.52□□□□□ -1.05
CCM2-212ENST00000480382 NDUFAF3Q9BU61 184 aa8.52□□□□□ -1.05
CCM2-212ENST00000480382 MDFICQ9P1T7 246 aa8.52□□□□□ -1.05
CCM2-212ENST00000480382 F5H768 121 aa8.51□□□□□ -1.05
CCM2-212ENST00000480382 TEX46H3BTG2 121 aa8.51□□□□□ -1.05
CCM2-212ENST00000480382 SPINK4O60575 86 aa8.51□□□□□ -1.05
CCM2-212ENST00000480382 TYMSP04818 313 aa8.51□□□□□ -1.05
CCM2-212ENST00000480382 PFN1P07737 140 aaKnown RBP8.51□□□□□ -1.05
CCM2-212ENST00000480382 TDRG1Q3Y452 100 aa8.51□□□□□ -1.05
CCM2-212ENST00000480382 TMEM88Q6PEY1 159 aa8.51□□□□□ -1.05
CCM2-212ENST00000480382 MRPL16Q9NX20 251 aaKnown RBP8.51□□□□□ -1.05
CCM2-212ENST00000480382 C11orf21Q9P2W6 132 aa8.51□□□□□ -1.05
CCM2-212ENST00000480382 TRGV2A0A075B6R0 118 aa8.5□□□□□ -1.05
CCM2-212ENST00000480382 GNRH2O43555 120 aa8.5□□□□□ -1.05
CCM2-212ENST00000480382 ZC2HC1AQ96GY0 325 aa8.5□□□□□ -1.05
CCM2-212ENST00000480382 KCNS1Q96KK3 526 aa8.5□□□□□ -1.05
CCM2-212ENST00000480382 FAM210BQ96KR6 192 aa8.5□□□□□ -1.05
CCM2-212ENST00000480382 SDF2L1Q9HCN8 221 aa8.5□□□□□ -1.05
CCM2-212ENST00000480382 IGHV3-16A0A0C4DH30 117 aa8.49□□□□□ -1.05
CCM2-212ENST00000480382 TRBV6-1A0A0K0K1D8 114 aa8.49□□□□□ -1.05
CCM2-212ENST00000480382 LTAP01374 205 aa8.49□□□□□ -1.05
CCM2-212ENST00000480382 IFNA1P01562 189 aa8.49□□□□□ -1.05
CCM2-212ENST00000480382 LGALS9CQ6DKI2 356 aa8.49□□□□□ -1.05
CCM2-212ENST00000480382 NHLRC2Q8NBF2 726 aa8.49□□□□□ -1.05
CCM2-212ENST00000480382 ZFP30Q9Y2G7 519 aa8.49□□□□□ -1.05
CCM2-212ENST00000480382 BCL2P10415 239 aa8.48□□□□□ -1.05
CCM2-212ENST00000480382 HOXA5P20719 270 aa8.48□□□□□ -1.05
CCM2-212ENST00000480382 LGALS9BQ3B8N2 356 aa8.48□□□□□ -1.05
CCM2-212ENST00000480382 C11orf52Q96A22 123 aa8.48□□□□□ -1.05
CCM2-212ENST00000480382 KMT2AQ03164 3969 aa8.47□□□□□ -1.05
CCM2-212ENST00000480382 SH2D1AO60880 128 aa8.47□□□□□ -1.05
CCM2-212ENST00000480382 IGHV3-53P01767 116 aa8.47□□□□□ -1.05
CCM2-212ENST00000480382 CRIP1P50238 77 aa8.47□□□□□ -1.05
CCM2-212ENST00000480382 MEF2BQ02080 365 aaPredicted RBP8.47□□□□□ -1.05
CCM2-212ENST00000480382 OR5I1Q13606 314 aa8.47□□□□□ -1.05
CCM2-212ENST00000480382 COX8CQ7Z4L0 72 aa8.47□□□□□ -1.05
CCM2-212ENST00000480382 C18orf15Q96N68 181 aa8.47□□□□□ -1.05
CCM2-212ENST00000480382 SPXQ9BT56 116 aa8.47□□□□□ -1.05
CCM2-212ENST00000480382 DERL1Q9BUN8 251 aa8.47□□□□□ -1.05
CCM2-212ENST00000480382 TRAV26-1A0A087WT03 109 aa8.46□□□□□ -1.06
CCM2-212ENST00000480382 IGKV3D-20A0A0C4DH25 116 aa8.46□□□□□ -1.06
CCM2-212ENST00000480382 FABP5P3A8MUU1 101 aa8.46□□□□□ -1.06
CCM2-212ENST00000480382 M0R036 132 aa8.46□□□□□ -1.06
CCM2-212ENST00000480382 S100A9P06702 114 aaKnown RBP8.46□□□□□ -1.06
CCM2-212ENST00000480382 RPL35P42766 123 aaKnown RBP8.46□□□□□ -1.06
CCM2-212ENST00000480382 BLOC1S1P78537 153 aa8.46□□□□□ -1.06
CCM2-212ENST00000480382 FAM162BQ5T6X4 162 aa8.46□□□□□ -1.06
CCM2-212ENST00000480382 C15orf53Q8NAA6 179 aa8.46□□□□□ -1.06
CCM2-212ENST00000480382 TXNDC17Q9BRA2 123 aa8.46□□□□□ -1.06
CCM2-212ENST00000480382 DNAH6Q9C0G6 4158 aa8.46□□□□□ -1.06
CCM2-212ENST00000480382 MUC4Q99102 2169 aa8.46□□□□□ -1.06
CCM2-212ENST00000480382 A0A0J9YY99 117 aa8.45□□□□□ -1.06
CCM2-212ENST00000480382 B4DEV8 164 aa8.45□□□□□ -1.06
CCM2-212ENST00000480382 M0R2P5 195 aa8.45□□□□□ -1.06
CCM2-212ENST00000480382 NUDT3O95989 172 aa8.45□□□□□ -1.06
CCM2-212ENST00000480382 ORM1P02763 201 aa8.45□□□□□ -1.06
CCM2-212ENST00000480382 ZNF674Q2M3X9 581 aa8.45□□□□□ -1.06
CCM2-212ENST00000480382 BAGE2Q86Y30 109 aa8.45□□□□□ -1.06
CCM2-212ENST00000480382 RASL10AQ92737 203 aa8.45□□□□□ -1.06
CCM2-212ENST00000480382 VAX2Q9UIW0 290 aa8.45□□□□□ -1.06
CCM2-212ENST00000480382 NACAE9PAV3 2078 aa8.44□□□□□ -1.06
CCM2-212ENST00000480382 PDE6DO43924 150 aa8.44□□□□□ -1.06
CCM2-212ENST00000480382 SFTA3P0C7M3 94 aa8.44□□□□□ -1.06
CCM2-212ENST00000480382 P0DMU3 169 aa8.44□□□□□ -1.06
CCM2-212ENST00000480382 FAM231AP0DMU4 169 aa8.44□□□□□ -1.06
CCM2-212ENST00000480382 FAM231CP0DMU5 169 aa8.44□□□□□ -1.06
CCM2-212ENST00000480382 RNASE3P12724 160 aaKnown RBP8.44□□□□□ -1.06
CCM2-212ENST00000480382 ASIPP42127 132 aa8.44□□□□□ -1.06
CCM2-212ENST00000480382 CENPWQ5EE01 88 aa8.44□□□□□ -1.06
CCM2-212ENST00000480382 LYPD6BQ8NI32 183 aa8.44□□□□□ -1.06
CCM2-212ENST00000480382 C9orf85Q96MD7 179 aa8.44□□□□□ -1.06
CCM2-212ENST00000480382 MLST8Q9BVC4 326 aa8.44□□□□□ -1.06
CCM2-212ENST00000480382 TMSB15BA0A087X1C1 80 aa8.43□□□□□ -1.06
CCM2-212ENST00000480382 KRBOX1C9JBD0 128 aa8.43□□□□□ -1.06
CCM2-212ENST00000480382 C9JCJ5 164 aa8.43□□□□□ -1.06
CCM2-212ENST00000480382 S100A4P26447 101 aaKnown RBP8.43□□□□□ -1.06
CCM2-212ENST00000480382 TAGLN2P37802 199 aaKnown RBP8.43□□□□□ -1.06
CCM2-212ENST00000480382 LINC01559Q495D7 138 aa8.43□□□□□ -1.06
CCM2-212ENST00000480382 PRR27Q6MZM9 219 aa8.43□□□□□ -1.06
CCM2-212ENST00000480382 UBE2DNLQ8IWF7 75 aa8.43□□□□□ -1.06
CCM2-212ENST00000480382 ZNF479Q96JC4 524 aa8.43□□□□□ -1.06
CCM2-212ENST00000480382 MED9Q9NWA0 146 aa8.43□□□□□ -1.06
CCM2-212ENST00000480382 TRAV4A0A0B4J268 109 aa8.42□□□□□ -1.06
CCM2-212ENST00000480382 RAB19A4D1S5 217 aa8.42□□□□□ -1.06
CCM2-212ENST00000480382 GRIFINA4D1Z8 144 aa8.42□□□□□ -1.06
CCM2-212ENST00000480382 H3BVH4 76 aa8.42□□□□□ -1.06
CCM2-212ENST00000480382 POM121L12Q8N7R1 296 aa8.42□□□□□ -1.06
CCM2-212ENST00000480382 VSIG2Q96IQ7 327 aa8.42□□□□□ -1.06
CCM2-212ENST00000480382 TRBV20OR9-2A0A075B6H5 130 aa8.41□□□□□ -1.06
CCM2-212ENST00000480382 TRGV4A0A0C4DH28 118 aa8.41□□□□□ -1.06
CCM2-212ENST00000480382 RBFOX3A6NFN3 312 aa8.41□□□□□ -1.06
CCM2-212ENST00000480382 PGPEP1LA6NFU8 196 aa8.41□□□□□ -1.06
CCM2-212ENST00000480382 MGST1P10620 155 aaKnown RBP8.41□□□□□ -1.06
CCM2-212ENST00000480382 GNG4P50150 75 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms