RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 C10orf126Q8N4M7 172 aa4.88□□□□□ -1.63
COL17A1-205ENST00000480127 INO80EQ8NBZ0 244 aaPredicted RBP4.88□□□□□ -1.63
COL17A1-205ENST00000480127 ASB13Q8WXK3 278 aa4.88□□□□□ -1.63
COL17A1-205ENST00000480127 VSIG2Q96IQ7 327 aa4.88□□□□□ -1.63
COL17A1-205ENST00000480127 PRADC1Q9BSG0 188 aa4.88□□□□□ -1.63
COL17A1-205ENST00000480127 MED28Q9H204 178 aa4.88□□□□□ -1.63
COL17A1-205ENST00000480127 BORCS7-ASMTA0A0B4J1R7 106 aa4.87□□□□□ -1.63
COL17A1-205ENST00000480127 IGHV3-16A0A0C4DH30 117 aa4.87□□□□□ -1.63
COL17A1-205ENST00000480127 M0R2P5 195 aa4.87□□□□□ -1.63
COL17A1-205ENST00000480127 MBP02144 154 aa4.87□□□□□ -1.63
COL17A1-205ENST00000480127 ARL14EPLP0DKL9 152 aa4.87□□□□□ -1.63
COL17A1-205ENST00000480127 BTF3P20290 206 aaKnown RBP4.87□□□□□ -1.63
COL17A1-205ENST00000480127 XGP55808 180 aa4.87□□□□□ -1.63
COL17A1-205ENST00000480127 RAB2AP61019 212 aa4.87□□□□□ -1.63
COL17A1-205ENST00000480127 GNG5P63218 68 aa4.87□□□□□ -1.63
COL17A1-205ENST00000480127 IL15RAQ13261 267 aa4.87□□□□□ -1.63
COL17A1-205ENST00000480127 ZNF479Q96JC4 524 aa4.87□□□□□ -1.63
COL17A1-205ENST00000480127 SGK494Q96LW2 274 aa4.87□□□□□ -1.63
COL17A1-205ENST00000480127 MSRB1Q9NZV6 116 aa4.87□□□□□ -1.63
COL17A1-205ENST00000480127 MDFICQ9P1T7 246 aa4.87□□□□□ -1.63
COL17A1-205ENST00000480127 LENEPQ9Y5L5 61 aa4.87□□□□□ -1.63
COL17A1-205ENST00000480127 SRRM2Q9UQ35 2752 aaKnown RBP4.86□□□□□ -1.63
COL17A1-205ENST00000480127 TRAV8-1A0A0A6YYK1 113 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 IGHV3-73A0A0B4J1V6 119 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 TRAV4A0A0B4J268 109 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 SERTM2A0A1B0GWG4 89 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 FBLL1A6NHQ2 334 aaKnown RBP4.86□□□□□ -1.63
COL17A1-205ENST00000480127 H0YIZ8 118 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 K7EQD1 137 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 PFN1P07737 140 aaKnown RBP4.86□□□□□ -1.63
COL17A1-205ENST00000480127 FHL2Q14192 279 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 ZNF876PQ49A33 203 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 KCNIP4Q6PIL6 250 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 LYPD5Q6UWN5 251 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 Q6ZQT7 251 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 PRNTQ86SH4 94 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 TMED6Q8WW62 240 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 FAM19A4Q96LR4 140 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 C18orf15Q96N68 181 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 MARVELD1Q9BSK0 173 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 SH3BGRL3Q9H299 93 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 Q9HAA7 133 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 PGPEP1Q9NXJ5 209 aa4.86□□□□□ -1.63
COL17A1-205ENST00000480127 FXYD6-FXYD2A0A087WZ82 144 aa4.85□□□□□ -1.63
COL17A1-205ENST00000480127 TAAR5O14804 337 aa4.85□□□□□ -1.63
COL17A1-205ENST00000480127 GNRH2O43555 120 aa4.85□□□□□ -1.63
COL17A1-205ENST00000480127 CXorf1O96002 111 aa4.85□□□□□ -1.63
COL17A1-205ENST00000480127 GCGP01275 180 aa4.85□□□□□ -1.63
COL17A1-205ENST00000480127 LGALSLQ3ZCW2 172 aaPredicted RBP4.85□□□□□ -1.63
COL17A1-205ENST00000480127 SMUG1Q53HV7 270 aa4.85□□□□□ -1.63
COL17A1-205ENST00000480127 Q5VSD8 79 aa4.85□□□□□ -1.63
COL17A1-205ENST00000480127 Q6AWC8 147 aa4.85□□□□□ -1.63
COL17A1-205ENST00000480127 C5orf17Q8NAS9 161 aa4.85□□□□□ -1.63
COL17A1-205ENST00000480127 FRZBQ92765 325 aa4.85□□□□□ -1.63
COL17A1-205ENST00000480127 ACTR3CQ9C0K3 210 aaPredicted RBP4.85□□□□□ -1.63
COL17A1-205ENST00000480127 TMEM167BQ9NRX6 74 aa4.85□□□□□ -1.63
COL17A1-205ENST00000480127 ALG5Q9Y673 324 aa4.85□□□□□ -1.63
COL17A1-205ENST00000480127 URGCP-MRPS24S4R325 110 aa4.85□□□□□ -1.63
COL17A1-205ENST00000480127 IGHV3-38A0A0C4DH36 116 aa4.84□□□□□ -1.63
COL17A1-205ENST00000480127 K7EP13 123 aa4.84□□□□□ -1.63
COL17A1-205ENST00000480127 TYMSP04818 313 aa4.84□□□□□ -1.63
COL17A1-205ENST00000480127 GCHFRP30047 84 aa4.84□□□□□ -1.63
COL17A1-205ENST00000480127 FUSP35637 526 aaKnown RBP eCLIP4.84□□□□□ -1.63
COL17A1-205ENST00000480127 ASIPP42127 132 aa4.84□□□□□ -1.63
COL17A1-205ENST00000480127 UBE2G1P62253 170 aa4.84□□□□□ -1.63
COL17A1-205ENST00000480127 SUMO1P63165 101 aaKnown RBP4.84□□□□□ -1.63
COL17A1-205ENST00000480127 RHOHQ15669 191 aa4.84□□□□□ -1.63
COL17A1-205ENST00000480127 SAPCD1Q5SSQ6 148 aa4.84□□□□□ -1.63
COL17A1-205ENST00000480127 AKR1C8PQ5T2L2 129 aa4.84□□□□□ -1.63
COL17A1-205ENST00000480127 CDPF1Q6NVV7 123 aa4.84□□□□□ -1.63
COL17A1-205ENST00000480127 Q6ZRN7 208 aaPredicted RBP4.84□□□□□ -1.63
COL17A1-205ENST00000480127 WFDC10BQ8IUB3 73 aa4.84□□□□□ -1.63
COL17A1-205ENST00000480127 RASL10AQ92737 203 aa4.84□□□□□ -1.63
COL17A1-205ENST00000480127 TNFRSF18Q9Y5U5 241 aa4.84□□□□□ -1.63
COL17A1-205ENST00000480127 IGLV5-52A0A0A0MRZ9 124 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 IGHV3-30P01768 117 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 IGHV3-33P01772 117 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 DNAH10OSP0CZ25 163 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 IGHV3-30-3P0DP02 117 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 IGHV3-30-5P0DP03 117 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 UBE2G2P60604 165 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 FLI1Q01543 452 aaPredicted RBP4.83□□□□□ -1.64
COL17A1-205ENST00000480127 IFITM3Q01628 133 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 CYB561D1Q8N8Q1 229 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.83□□□□□ -1.64
COL17A1-205ENST00000480127 SYT8Q8NBV8 401 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 OR2G3Q8NGZ4 309 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 STOML3Q8TAV4 291 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 RAB24Q969Q5 203 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 TM2D2Q9BX73 214 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 WFDC1Q9HC57 220 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 BATF3Q9NR55 127 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 PSG8Q9UQ74 426 aa4.83□□□□□ -1.64
COL17A1-205ENST00000480127 A0A087WTM6 91 aa4.82□□□□□ -1.64
COL17A1-205ENST00000480127 LOC100131303A0A0U1RQF7 123 aa4.82□□□□□ -1.64
COL17A1-205ENST00000480127 CIDEAO60543 219 aa4.82□□□□□ -1.64
COL17A1-205ENST00000480127 PTTG1O95997 202 aa4.82□□□□□ -1.64
COL17A1-205ENST00000480127 TCRAP04437 139 aa4.82□□□□□ -1.64
COL17A1-205ENST00000480127 MGST1P10620 155 aaKnown RBP4.82□□□□□ -1.64
COL17A1-205ENST00000480127 ATP6V0CP27449 155 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms