RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ORMDL2Q53FV1 153 aa18.7■□□□□ 0.58
SYNGAP1-206ENST00000479510 UNQ9165/PRO28630Q6UXU0 137 aa18.7■□□□□ 0.58
SYNGAP1-206ENST00000479510 PRORYQ9H606 182 aa18.7■□□□□ 0.58
SYNGAP1-206ENST00000479510 TRAV12-1A0A0B4J245 112 aa18.69■□□□□ 0.58
SYNGAP1-206ENST00000479510 TRAV26-2A0A0B4J265 109 aa18.69■□□□□ 0.58
SYNGAP1-206ENST00000479510 PLNP26678 52 aa18.69■□□□□ 0.58
SYNGAP1-206ENST00000479510 LINC00527Q9UJ94 153 aa18.69■□□□□ 0.58
SYNGAP1-206ENST00000479510 TRAV40A0A0B4J280 105 aa18.69■□□□□ 0.58
SYNGAP1-206ENST00000479510 K7EP34 96 aa18.69■□□□□ 0.58
SYNGAP1-206ENST00000479510 ASIPP42127 132 aa18.69■□□□□ 0.58
SYNGAP1-206ENST00000479510 ZC2HC1BQ5TFG8 222 aa18.69■□□□□ 0.58
SYNGAP1-206ENST00000479510 IGHV3OR16-10A0A075B7F0 116 aa18.68■□□□□ 0.58
SYNGAP1-206ENST00000479510 A6NDX4 124 aa18.68■□□□□ 0.58
SYNGAP1-206ENST00000479510 M0R381 172 aa18.68■□□□□ 0.58
SYNGAP1-206ENST00000479510 PCP4P48539 62 aa18.68■□□□□ 0.58
SYNGAP1-206ENST00000479510 Q6ZQT7 251 aa18.68■□□□□ 0.58
SYNGAP1-206ENST00000479510 DPH3P1Q9H4G8 78 aa18.67■□□□□ 0.58
SYNGAP1-206ENST00000479510 MED13LQ71F56 2210 aa18.67■□□□□ 0.58
SYNGAP1-206ENST00000479510 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.67■□□□□ 0.58
SYNGAP1-206ENST00000479510 H3BUT2 72 aa18.67■□□□□ 0.58
SYNGAP1-206ENST00000479510 PPP1R17O96001 155 aa18.67■□□□□ 0.58
SYNGAP1-206ENST00000479510 TRBV12-3P01733 135 aa18.67■□□□□ 0.58
SYNGAP1-206ENST00000479510 BRD3OSQ6XYD6 125 aa18.67■□□□□ 0.58
SYNGAP1-206ENST00000479510 JMJD8Q96S16 334 aa18.67■□□□□ 0.58
SYNGAP1-206ENST00000479510 CHAC1Q9BUX1 264 aa18.67■□□□□ 0.58
SYNGAP1-206ENST00000479510 MRPL35Q9NZE8 188 aaKnown RBP18.67■□□□□ 0.58
SYNGAP1-206ENST00000479510 HIVEP3Q5T1R4 2406 aa18.66■□□□□ 0.58
SYNGAP1-206ENST00000479510 ATRXP46100 2492 aa18.66■□□□□ 0.58
SYNGAP1-206ENST00000479510 SMIM13P0DJ93 91 aa18.66■□□□□ 0.58
SYNGAP1-206ENST00000479510 C10orf105Q8TEF2 133 aa18.66■□□□□ 0.58
SYNGAP1-206ENST00000479510 IGHV4-61A0A0C4DH41 118 aa18.65■□□□□ 0.58
SYNGAP1-206ENST00000479510 OR5A1Q8NGJ0 315 aa18.65■□□□□ 0.58
SYNGAP1-206ENST00000479510 SPTBN1Q01082 2364 aaKnown RBP18.65■□□□□ 0.58
SYNGAP1-206ENST00000479510 K7ERU9 68 aa18.65■□□□□ 0.58
SYNGAP1-206ENST00000479510 S100A4P26447 101 aaKnown RBP18.65■□□□□ 0.58
SYNGAP1-206ENST00000479510 SUMO2P61956 95 aaKnown RBP18.65■□□□□ 0.58
SYNGAP1-206ENST00000479510 SAMD13Q5VXD3 122 aa18.65■□□□□ 0.58
SYNGAP1-206ENST00000479510 GTSCR1Q86UQ5 136 aa18.65■□□□□ 0.58
SYNGAP1-206ENST00000479510 TMEM160Q9NX00 188 aa18.65■□□□□ 0.58
SYNGAP1-206ENST00000479510 TRBV25-1A0A075B6N4 114 aa18.64■□□□□ 0.57
SYNGAP1-206ENST00000479510 TAL2Q16559 108 aa18.64■□□□□ 0.57
SYNGAP1-206ENST00000479510 TM2D2Q9BX73 214 aa18.64■□□□□ 0.57
SYNGAP1-206ENST00000479510 A0A1W2PPM0 123 aa18.64■□□□□ 0.57
SYNGAP1-206ENST00000479510 TOMM6Q96B49 74 aa18.64■□□□□ 0.57
SYNGAP1-206ENST00000479510 ZNF580Q9UK33 172 aa18.64■□□□□ 0.57
SYNGAP1-206ENST00000479510 PHLDA3Q9Y5J5 127 aa18.64■□□□□ 0.57
SYNGAP1-206ENST00000479510 H7C1H1 209 aa18.63■□□□□ 0.57
SYNGAP1-206ENST00000479510 GNLYP22749 145 aa18.63■□□□□ 0.57
SYNGAP1-206ENST00000479510 IGLV1-40P01703 118 aa18.62■□□□□ 0.57
SYNGAP1-206ENST00000479510 RASL10AQ92737 203 aa18.62■□□□□ 0.57
SYNGAP1-206ENST00000479510 COL6A6A6NMZ7 2263 aa18.62■□□□□ 0.57
SYNGAP1-206ENST00000479510 F8VRH5 84 aa18.62■□□□□ 0.57
SYNGAP1-206ENST00000479510 ANXA2RQ3ZCQ2 193 aa18.62■□□□□ 0.57
SYNGAP1-206ENST00000479510 POM121L12Q8N7R1 296 aa18.62■□□□□ 0.57
SYNGAP1-206ENST00000479510 NXPH4O95158 308 aa18.61■□□□□ 0.57
SYNGAP1-206ENST00000479510 IGHV4-38-2P0DP08 117 aa18.61■□□□□ 0.57
SYNGAP1-206ENST00000479510 GCSHP23434 173 aa18.61■□□□□ 0.57
SYNGAP1-206ENST00000479510 H3BUX3 64 aa18.61■□□□□ 0.57
SYNGAP1-206ENST00000479510 K7EMT4 169 aa18.61■□□□□ 0.57
SYNGAP1-206ENST00000479510 PF4V1P10720 104 aa18.61■□□□□ 0.57
SYNGAP1-206ENST00000479510 CLEC2AQ6UVW9 174 aa18.6■□□□□ 0.57
SYNGAP1-206ENST00000479510 CCL19Q99731 98 aa18.6■□□□□ 0.57
SYNGAP1-206ENST00000479510 RHPN1-AS1Q9BWJ2 59 aa18.6■□□□□ 0.57
SYNGAP1-206ENST00000479510 DAZ1Q9NQZ3 744 aaKnown RBP18.6■□□□□ 0.57
SYNGAP1-206ENST00000479510 FABP2P12104 132 aa18.59■□□□□ 0.57
SYNGAP1-206ENST00000479510 LY6EQ16553 131 aa18.59■□□□□ 0.57
SYNGAP1-206ENST00000479510 RNF151Q2KHN1 245 aa18.59■□□□□ 0.57
SYNGAP1-206ENST00000479510 CEND1Q8N111 149 aa18.59■□□□□ 0.57
SYNGAP1-206ENST00000479510 SPOCK3Q9BQ16 436 aa18.59■□□□□ 0.57
SYNGAP1-206ENST00000479510 LINC01619G3V211 115 aa18.59■□□□□ 0.57
SYNGAP1-206ENST00000479510 RNASE4P34096 147 aaKnown RBP18.59■□□□□ 0.57
SYNGAP1-206ENST00000479510 FXYD2P54710 66 aa18.59■□□□□ 0.57
SYNGAP1-206ENST00000479510 RAB37Q96AX2 223 aa18.59■□□□□ 0.57
SYNGAP1-206ENST00000479510 SCGB3A1Q96QR1 104 aa18.59■□□□□ 0.57
SYNGAP1-206ENST00000479510 KLK15Q9H2R5 256 aa18.59■□□□□ 0.57
SYNGAP1-206ENST00000479510 RELNP78509 3460 aa18.58■□□□□ 0.57
SYNGAP1-206ENST00000479510 RPL32P62910 135 aaKnown RBP18.58■□□□□ 0.57
SYNGAP1-206ENST00000479510 CACNA1BQ00975 2339 aa18.58■□□□□ 0.56
SYNGAP1-206ENST00000479510 PIEZO1Q92508 2521 aa18.58■□□□□ 0.56
SYNGAP1-206ENST00000479510 J3KRW8 73 aa18.58■□□□□ 0.56
SYNGAP1-206ENST00000479510 IGHV3-11P01762 117 aa18.58■□□□□ 0.56
SYNGAP1-206ENST00000479510 RPL11P62913 178 aaKnown RBP18.58■□□□□ 0.56
SYNGAP1-206ENST00000479510 SAMD5Q5TGI4 173 aa18.58■□□□□ 0.56
SYNGAP1-206ENST00000479510 TTTY13Q9BZ97 58 aa18.58■□□□□ 0.56
SYNGAP1-206ENST00000479510 SPCS1Q9Y6A9 102 aa18.58■□□□□ 0.56
SYNGAP1-206ENST00000479510 LINC01549A6NIU2 74 aa18.57■□□□□ 0.56
SYNGAP1-206ENST00000479510 CFHR3Q02985 330 aa18.57■□□□□ 0.56
SYNGAP1-206ENST00000479510 C14orf178Q8N769 122 aaPredicted RBP18.57■□□□□ 0.56
SYNGAP1-206ENST00000479510 NEXN-AS1Q8NBZ9 246 aa18.57■□□□□ 0.56
SYNGAP1-206ENST00000479510 RNASE3P12724 160 aaKnown RBP18.56■□□□□ 0.56
SYNGAP1-206ENST00000479510 KLLNB2CW77 178 aa18.56■□□□□ 0.56
SYNGAP1-206ENST00000479510 MSMBP08118 114 aa18.56■□□□□ 0.56
SYNGAP1-206ENST00000479510 ID1P41134 155 aa18.56■□□□□ 0.56
SYNGAP1-206ENST00000479510 CHTOPQ9Y3Y2 248 aaKnown RBP18.56■□□□□ 0.56
SYNGAP1-206ENST00000479510 PHLDA1Q8WV24 401 aaPredicted RBP18.55■□□□□ 0.56
SYNGAP1-206ENST00000479510 TM4SF20Q53R12 229 aa18.54■□□□□ 0.56
SYNGAP1-206ENST00000479510 VPS25Q9BRG1 176 aa18.54■□□□□ 0.56
SYNGAP1-206ENST00000479510 ABCA2Q9BZC7 2435 aa18.54■□□□□ 0.56
SYNGAP1-206ENST00000479510 RNF223E7ERA6 249 aa18.54■□□□□ 0.56
SYNGAP1-206ENST00000479510 BLCAPP62952 87 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms