RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 P01737 135 aa9.87□□□□□ -0.83
SMARCAL1-211ENST00000479008 RPL19P84098 196 aaKnown RBP9.87□□□□□ -0.83
SMARCAL1-211ENST00000479008 PNRC1Q12796 327 aaPredicted RBP9.87□□□□□ -0.83
SMARCAL1-211ENST00000479008 LINC01559Q495D7 138 aa9.87□□□□□ -0.83
SMARCAL1-211ENST00000479008 NUDT10Q8NFP7 164 aa9.87□□□□□ -0.83
SMARCAL1-211ENST00000479008 NUDT11Q96G61 164 aa9.87□□□□□ -0.83
SMARCAL1-211ENST00000479008 KCNS1Q96KK3 526 aa9.87□□□□□ -0.83
SMARCAL1-211ENST00000479008 SPATA25Q9BR10 227 aa9.87□□□□□ -0.83
SMARCAL1-211ENST00000479008 TM2D3Q9BRN9 247 aa9.87□□□□□ -0.83
SMARCAL1-211ENST00000479008 CARHSP1Q9Y2V2 147 aaKnown RBP9.87□□□□□ -0.83
SMARCAL1-211ENST00000479008 TMEM189A5PLL7 270 aa9.86□□□□□ -0.83
SMARCAL1-211ENST00000479008 B4DEV8 164 aa9.86□□□□□ -0.83
SMARCAL1-211ENST00000479008 GATCO43716 136 aaKnown RBP9.86□□□□□ -0.83
SMARCAL1-211ENST00000479008 TYMSP04818 313 aa9.86□□□□□ -0.83
SMARCAL1-211ENST00000479008 RRN3P1Q2M238 152 aa9.86□□□□□ -0.83
SMARCAL1-211ENST00000479008 FAM231DQ6ZW35 169 aa9.86□□□□□ -0.83
SMARCAL1-211ENST00000479008 OR2D3Q8NGH3 330 aa9.86□□□□□ -0.83
SMARCAL1-211ENST00000479008 LINC00467Q9BRT7 94 aa9.86□□□□□ -0.83
SMARCAL1-211ENST00000479008 OSTCQ9NRP0 149 aa9.86□□□□□ -0.83
SMARCAL1-211ENST00000479008 TP53TG3Q9ULZ0 132 aa9.86□□□□□ -0.83
SMARCAL1-211ENST00000479008 MEGF8Q7Z7M0 2845 aa9.85□□□□□ -0.83
SMARCAL1-211ENST00000479008 TRGV11A0A075B6L2 103 aa9.85□□□□□ -0.83
SMARCAL1-211ENST00000479008 GNRH2O43555 120 aa9.85□□□□□ -0.83
SMARCAL1-211ENST00000479008 APOC3P02656 99 aa9.85□□□□□ -0.83
SMARCAL1-211ENST00000479008 AZU1P20160 251 aa9.85□□□□□ -0.83
SMARCAL1-211ENST00000479008 TDRG1Q3Y452 100 aa9.85□□□□□ -0.83
SMARCAL1-211ENST00000479008 C15orf54Q8N8G6 183 aa9.85□□□□□ -0.83
SMARCAL1-211ENST00000479008 OR10G8Q8NGN5 311 aa9.85□□□□□ -0.83
SMARCAL1-211ENST00000479008 SFRP2Q96HF1 295 aa9.85□□□□□ -0.83
SMARCAL1-211ENST00000479008 NEU1Q99519 415 aa9.85□□□□□ -0.83
SMARCAL1-211ENST00000479008 RPP21Q9H633 154 aaKnown RBP9.85□□□□□ -0.83
SMARCAL1-211ENST00000479008 ZMAT4Q9H898 229 aa9.85□□□□□ -0.83
SMARCAL1-211ENST00000479008 NBEAL2Q6ZNJ1 2754 aa9.85□□□□□ -0.83
SMARCAL1-211ENST00000479008 DNAH9Q9NYC9 4486 aa9.84□□□□□ -0.83
SMARCAL1-211ENST00000479008 GRIFINA4D1Z8 144 aa9.84□□□□□ -0.83
SMARCAL1-211ENST00000479008 SMIM9A6NGZ8 99 aa9.84□□□□□ -0.83
SMARCAL1-211ENST00000479008 IGHV4-28A0A0C4DH34 117 aa9.83□□□□□ -0.84
SMARCAL1-211ENST00000479008 GZMBP10144 247 aa9.83□□□□□ -0.84
SMARCAL1-211ENST00000479008 MIFP14174 115 aa9.83□□□□□ -0.84
SMARCAL1-211ENST00000479008 RPS20P60866 119 aaKnown RBP9.83□□□□□ -0.84
SMARCAL1-211ENST00000479008 RNASE8Q8TDE3 154 aaKnown RBP9.83□□□□□ -0.84
SMARCAL1-211ENST00000479008 TMEM263Q8WUH6 116 aaKnown RBP9.83□□□□□ -0.84
SMARCAL1-211ENST00000479008 C16orf74Q96GX8 76 aa9.83□□□□□ -0.84
SMARCAL1-211ENST00000479008 IGHV3-16A0A0C4DH30 117 aa9.82□□□□□ -0.84
SMARCAL1-211ENST00000479008 S100A4P26447 101 aaKnown RBP9.82□□□□□ -0.84
SMARCAL1-211ENST00000479008 ASIPP42127 132 aa9.82□□□□□ -0.84
SMARCAL1-211ENST00000479008 ZNF415Q09FC8 603 aa9.82□□□□□ -0.84
SMARCAL1-211ENST00000479008 RNF212Q495C1 297 aa9.82□□□□□ -0.84
SMARCAL1-211ENST00000479008 ZNF493Q6ZR52 646 aa9.82□□□□□ -0.84
SMARCAL1-211ENST00000479008 Q8NAQ8 132 aa9.82□□□□□ -0.84
SMARCAL1-211ENST00000479008 CLRN3Q8NCR9 226 aa9.82□□□□□ -0.84
SMARCAL1-211ENST00000479008 MDFICQ9P1T7 246 aa9.82□□□□□ -0.84
SMARCAL1-211ENST00000479008 TIMM8BQ9Y5J9 83 aaPredicted RBP9.82□□□□□ -0.84
SMARCAL1-211ENST00000479008 V9GYV3 84 aa9.82□□□□□ -0.84
SMARCAL1-211ENST00000479008 HUWE1Q7Z6Z7 4374 aaKnown RBP9.82□□□□□ -0.84
SMARCAL1-211ENST00000479008 XKRY2A2RUG3 117 aa9.81□□□□□ -0.84
SMARCAL1-211ENST00000479008 H3BVH4 76 aa9.81□□□□□ -0.84
SMARCAL1-211ENST00000479008 DEFB4AO15263 64 aa9.81□□□□□ -0.84
SMARCAL1-211ENST00000479008 MT-ND4LP03901 98 aa9.81□□□□□ -0.84
SMARCAL1-211ENST00000479008 CXCL1P09341 107 aa9.81□□□□□ -0.84
SMARCAL1-211ENST00000479008 EMP1P54849 157 aa9.81□□□□□ -0.84
SMARCAL1-211ENST00000479008 ZNF575Q86XF7 245 aa9.81□□□□□ -0.84
SMARCAL1-211ENST00000479008 SVBPQ8N300 66 aa9.81□□□□□ -0.84
SMARCAL1-211ENST00000479008 C11orf72Q8NBR9 251 aa9.81□□□□□ -0.84
SMARCAL1-211ENST00000479008 GSN-AS1Q9NRJ2 163 aa9.81□□□□□ -0.84
SMARCAL1-211ENST00000479008 MUC4Q99102 2169 aa9.8□□□□□ -0.84
SMARCAL1-211ENST00000479008 PLAC8L1A1L4L8 177 aa9.8□□□□□ -0.84
SMARCAL1-211ENST00000479008 A8MWL6 223 aa9.8□□□□□ -0.84
SMARCAL1-211ENST00000479008 SNURFLB1AK76 121 aa9.8□□□□□ -0.84
SMARCAL1-211ENST00000479008 PPP1R2P9O14990 202 aa9.8□□□□□ -0.84
SMARCAL1-211ENST00000479008 NHLRC4P0CG21 123 aaPredicted RBP9.8□□□□□ -0.84
SMARCAL1-211ENST00000479008 RNASE3P12724 160 aaKnown RBP9.8□□□□□ -0.84
SMARCAL1-211ENST00000479008 TCL1AP56279 114 aa9.8□□□□□ -0.84
SMARCAL1-211ENST00000479008 CT83Q5H943 113 aa9.8□□□□□ -0.84
SMARCAL1-211ENST00000479008 DNLZQ5SXM8 178 aa9.8□□□□□ -0.84
SMARCAL1-211ENST00000479008 ANAPC16Q96DE5 110 aa9.8□□□□□ -0.84
SMARCAL1-211ENST00000479008 PRKDCP78527 4128 aaKnown RBP9.8□□□□□ -0.84
SMARCAL1-211ENST00000479008 C7orf77A4D0Y5 90 aa9.79□□□□□ -0.84
SMARCAL1-211ENST00000479008 SNAPINO95295 136 aa9.79□□□□□ -0.84
SMARCAL1-211ENST00000479008 ARMS2P0C7Q2 107 aa9.79□□□□□ -0.84
SMARCAL1-211ENST00000479008 C9orf85Q96MD7 179 aa9.79□□□□□ -0.84
SMARCAL1-211ENST00000479008 IL36BQ9NZH7 164 aa9.79□□□□□ -0.84
SMARCAL1-211ENST00000479008 ATP6V1G1O75348 118 aa9.78□□□□□ -0.84
SMARCAL1-211ENST00000479008 IGLC6P0CF74 106 aa9.78□□□□□ -0.84
SMARCAL1-211ENST00000479008 RHEBQ15382 184 aa9.78□□□□□ -0.84
SMARCAL1-211ENST00000479008 FER1L6-AS1Q8NA97 138 aa9.78□□□□□ -0.84
SMARCAL1-211ENST00000479008 IL17DQ8TAD2 202 aa9.78□□□□□ -0.84
SMARCAL1-211ENST00000479008 TSKUQ8WUA8 353 aa9.78□□□□□ -0.84
SMARCAL1-211ENST00000479008 GTSF1Q8WW33 167 aa9.78□□□□□ -0.84
SMARCAL1-211ENST00000479008 TPPP3Q9BW30 176 aa9.78□□□□□ -0.84
SMARCAL1-211ENST00000479008 CTDSP1Q9GZU7 261 aa9.78□□□□□ -0.84
SMARCAL1-211ENST00000479008 NOP10Q9NPE3 64 aaKnown RBP9.78□□□□□ -0.84
SMARCAL1-211ENST00000479008 RPS10P5Q9NQ39 176 aa9.78□□□□□ -0.84
SMARCAL1-211ENST00000479008 TENM3Q9P273 2699 aa9.78□□□□□ -0.84
SMARCAL1-211ENST00000479008 A0A0J9YWU9 116 aa9.77□□□□□ -0.85
SMARCAL1-211ENST00000479008 MED14OSP0DP75 135 aa9.77□□□□□ -0.85
SMARCAL1-211ENST00000479008 SPXQ9BT56 116 aa9.77□□□□□ -0.85
SMARCAL1-211ENST00000479008 C11orf68Q9H3H3 251 aaKnown RBP9.77□□□□□ -0.85
SMARCAL1-211ENST00000479008 A0A1W2PPQ1 181 aa9.76□□□□□ -0.85
SMARCAL1-211ENST00000479008 HIGD1CA8MV81 97 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms