RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 BRI3O95415 125 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 RLN2P04090 185 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 CTXN2P0C2S0 81 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 SEC11BP0C7V7 166 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 PSMB8P28062 276 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 PPP1CCP36873 323 aaKnown RBP2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 SULT1A2P50226 295 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 DEFA6Q01524 100 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 IL15RAQ13261 267 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 DHRS2Q13268 280 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 DIAPH2-AS1Q14236 149 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 PEA15Q15121 130 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 MMDQ15546 238 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 RNASE10Q5GAN6 216 aaKnown RBP2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR10K2Q6IF99 312 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 PRSS54Q6PEW0 395 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 DPPA3Q6W0C5 159 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 SLC25A29Q8N8R3 303 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 TERB2Q8NHR7 220 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 PPP1R1CQ8WVI7 109 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 C4orf3Q8WVX3 66 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 ARHGAP5-AS1Q96IT6 56 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 BTF3L4Q96K17 158 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 HSPB9Q9BQS6 159 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 FAAP24Q9BTP7 215 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 PBDC1Q9BVG4 233 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 ZNF471Q9BX82 626 aaPredicted RBP2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 FXYD6Q9H0Q3 95 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR2D2Q9H210 308 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 TMEM242Q9NWH2 141 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 WASHC3Q9Y3C0 194 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 V9GYY9 64 aa2.23□□□□□ -2.05
CDC42BPA-212ENST00000478573 TGP01266 2768 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 COL7A1Q02388 2944 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 TRAV8-6A0A0B4J262 113 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 TRAV41A0A0B4J266 112 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 IGKV1-6A0A0C4DH72 117 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 DUXBA0A1W2PPF3 345 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 A8MUU9 505 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 SEC14L6B5MCN3 397 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 SCO1O75880 301 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 SFT2D2O95562 160 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 IFNA17P01571 189 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 IGHV3-7P01780 117 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 HLA-AP01891 365 aaKnown RBP2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 CD3DP04234 171 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 FABP1P07148 127 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 LGALS1P09382 135 aaKnown RBP2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 CD24P25063 80 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 GALR1P47211 349 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 REG1BP48304 166 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 INSL3P51460 131 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 CLDN12P56749 244 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 DEFA5Q01523 94 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 TMEM267Q0VDI3 215 aaPredicted RBP2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 SMCO1Q147U7 214 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 TAL2Q16559 108 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 RTL8BQ17RB0 113 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 RPL39P5Q59GN2 51 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 C10orf99Q6UWK7 81 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 LHFPL1Q86WI0 220 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 STX12Q86Y82 276 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 OR10J5Q8NHC4 309 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 C2orf50Q96LR7 162 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 C20orf144Q9BQM9 153 aa2.22□□□□□ -2.05
CDC42BPA-212ENST00000478573 BORCS7-ASMTA0A0B4J1R7 106 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 TRAV1-1A0A0B4J248 108 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 TMEM235A6NFC5 223 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 CA2P00918 260 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 IFNA21P01568 189 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 IFNA6P05013 189 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 SCTP09683 121 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 HIST1H1BP16401 226 aaKnown RBP2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 CNTFRP26992 372 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 LGALS7P47929 136 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 CMC4P56277 68 aaPredicted RBP2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 RAB2AP61019 212 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 UBE2KP61086 200 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 CATR1Q13166 79 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 PLGLAQ15195 96 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 KLK9Q2XQG4 91 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 VMA21Q3ZAQ7 101 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 KRTAP13-2Q52LG2 175 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 AKIRIN2Q53H80 203 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 IGFL1Q6UW32 110 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 RNF182Q8N6D2 247 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 OR13C8Q8NGS7 320 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 VSTM2AQ8TAG5 236 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 RNASEH2CQ8TDP1 164 aaKnown RBP2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 HIST1H2BAQ96A08 127 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 GINS3Q9BRX5 216 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 ZNF2Q9BSG1 426 aaPredicted RBP2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 ATG5Q9H1Y0 275 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 FBXL15Q9H469 300 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 BET1LQ9NYM9 111 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 ANXA10Q9UJ72 324 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 KLK9Q9UKQ9 250 aa2.21□□□□□ -2.06
CDC42BPA-212ENST00000478573 FAM240AA0A1B0GVK7 77 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 FAM223BA6NKX1 122 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 K7EIL1 84 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms