RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 MUC21Q5SSG8 566 aa9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 PRR9Q5T870 116 aa9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 RNF185Q96GF1 192 aa9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 MIEN1Q9BRT3 115 aa9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 USP9YO00507 2555 aaPredicted RBP9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 PTPN13Q12923 2485 aa9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 IFI27P40305 119 aaPredicted RBP9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 SPATA12Q7Z6I5 190 aa9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 DPF1Q92782 380 aa9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 MSRB1Q9NZV6 116 aa9.38□□□□□ -0.91
TRAF3IP3-213ENST00000478359 TSPOP30536 169 aa9.37□□□□□ -0.91
TRAF3IP3-213ENST00000478359 RNASE4P34096 147 aaKnown RBP9.37□□□□□ -0.91
TRAF3IP3-213ENST00000478359 SPATA45Q537H7 98 aa9.37□□□□□ -0.91
TRAF3IP3-213ENST00000478359 HIST2H2BCQ6DN03 193 aa9.37□□□□□ -0.91
TRAF3IP3-213ENST00000478359 DEFB125Q8N687 156 aa9.37□□□□□ -0.91
TRAF3IP3-213ENST00000478359 MRAP2Q96G30 205 aa9.37□□□□□ -0.91
TRAF3IP3-213ENST00000478359 GCN1Q92616 2671 aaKnown RBP9.37□□□□□ -0.91
TRAF3IP3-213ENST00000478359 TRAV9-2A0A087WT02 112 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 A0A0J9YX75 114 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 LINC01546A6NGU7 62 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 PRSS47A8MTI9 375 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 F6UB75 175 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 H3BVH4 76 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 NPYP01303 97 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 HBDP02042 147 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 SRD5A1P18405 259 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 FAM159AQ6UWV7 190 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 ZNF705AQ6ZN79 300 aaPredicted RBP9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 WFDC3Q8IUB2 231 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 PHLDA3Q9Y5J5 127 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 DNAJC9-AS1A6NH13 148 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 TNFRSF6BO95407 300 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 TDRG1Q3Y452 100 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 ANXA2RQ3ZCQ2 193 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 TCTEX1D4Q5JR98 221 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 PSMG4Q5JS54 123 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 FOXI2Q6ZQN5 318 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 SCRT2Q9NQ03 307 aa9.36□□□□□ -0.91
TRAF3IP3-213ENST00000478359 LOC389332A0A1B0GUA5 103 aa9.35□□□□□ -0.91
TRAF3IP3-213ENST00000478359 J3KRW8 73 aa9.35□□□□□ -0.91
TRAF3IP3-213ENST00000478359 ZNF688P0C7X2 276 aa9.35□□□□□ -0.91
TRAF3IP3-213ENST00000478359 EDN2P20800 178 aa9.35□□□□□ -0.91
TRAF3IP3-213ENST00000478359 EVI2AP22794 236 aa9.35□□□□□ -0.91
TRAF3IP3-213ENST00000478359 Q6ZSV7 163 aa9.35□□□□□ -0.91
TRAF3IP3-213ENST00000478359 OR11H1Q8NG94 326 aa9.35□□□□□ -0.91
TRAF3IP3-213ENST00000478359 OR1N2Q8NGR9 330 aa9.35□□□□□ -0.91
TRAF3IP3-213ENST00000478359 DUX5Q96PT3 197 aa9.35□□□□□ -0.91
TRAF3IP3-213ENST00000478359 ZNF747Q9BV97 191 aa9.35□□□□□ -0.91
TRAF3IP3-213ENST00000478359 UQCR10Q9UDW1 63 aa9.35□□□□□ -0.91
TRAF3IP3-213ENST00000478359 C7orf71A4D174 169 aa9.34□□□□□ -0.91
TRAF3IP3-213ENST00000478359 OR4C46A6NHA9 309 aa9.34□□□□□ -0.91
TRAF3IP3-213ENST00000478359 PPP1R17O96001 155 aa9.34□□□□□ -0.91
TRAF3IP3-213ENST00000478359 OR9G4Q8NGQ1 327 aa9.34□□□□□ -0.91
TRAF3IP3-213ENST00000478359 DPH3P1Q9H4G8 78 aa9.34□□□□□ -0.91
TRAF3IP3-213ENST00000478359 TMEM160Q9NX00 188 aa9.34□□□□□ -0.91
TRAF3IP3-213ENST00000478359 CREBBPQ92793 2442 aa9.34□□□□□ -0.91
TRAF3IP3-213ENST00000478359 POLQO75417 2590 aa9.34□□□□□ -0.91
TRAF3IP3-213ENST00000478359 HSBP1L1C9JCN9 74 aa9.34□□□□□ -0.91
TRAF3IP3-213ENST00000478359 CDKN1BP46527 198 aa9.34□□□□□ -0.91
TRAF3IP3-213ENST00000478359 AP1S3Q96PC3 154 aa9.34□□□□□ -0.91
TRAF3IP3-213ENST00000478359 APCP25054 2843 aa9.33□□□□□ -0.92
TRAF3IP3-213ENST00000478359 K7EMI3 77 aa9.33□□□□□ -0.92
TRAF3IP3-213ENST00000478359 M0R143 59 aa9.33□□□□□ -0.92
TRAF3IP3-213ENST00000478359 NCR2O95944 276 aa9.33□□□□□ -0.92
TRAF3IP3-213ENST00000478359 TFPI2P48307 235 aa9.33□□□□□ -0.92
TRAF3IP3-213ENST00000478359 LINC01545Q5VT33 79 aa9.33□□□□□ -0.92
TRAF3IP3-213ENST00000478359 Q8N8P6 123 aa9.33□□□□□ -0.92
TRAF3IP3-213ENST00000478359 OR2K2Q8NGT1 345 aa9.33□□□□□ -0.92
TRAF3IP3-213ENST00000478359 YAE1D1Q9NRH1 226 aa9.33□□□□□ -0.92
TRAF3IP3-213ENST00000478359 FASNP49327 2511 aaKnown RBP9.33□□□□□ -0.92
TRAF3IP3-213ENST00000478359 SMKR1H3BMG3 65 aa9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 NXPH4O95158 308 aa9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 IGLC3P0DOY3 106 aa9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 SLURP1P55000 103 aa9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 DEFB1P60022 68 aa9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 KHDC1LQ5JSQ8 128 aa9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 KLHL30-AS1Q8NEE0 82 aa9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 ST20Q9HBF5 79 aa9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 CENPEQ02224 2701 aa9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 MAP1AP78559 2803 aaPredicted RBP9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 M0R381 172 aa9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 RNASE1P07998 156 aaKnown RBP9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 KRTAP1-1Q07627 177 aa9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 Q6ZQT7 251 aa9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 C2orf88Q9BSF0 95 aa9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 C16orf95Q9H693 158 aa9.32□□□□□ -0.92
TRAF3IP3-213ENST00000478359 A0A096LNJ9 63 aa9.31□□□□□ -0.92
TRAF3IP3-213ENST00000478359 RNASE3P12724 160 aaKnown RBP9.31□□□□□ -0.92
TRAF3IP3-213ENST00000478359 FCER1GP30273 86 aa9.31□□□□□ -0.92
TRAF3IP3-213ENST00000478359 ZNF418Q8TF45 676 aaPredicted RBP9.31□□□□□ -0.92
TRAF3IP3-213ENST00000478359 C20orf78Q9BR46 151 aa9.31□□□□□ -0.92
TRAF3IP3-213ENST00000478359 ABCA12Q86UK0 2595 aa9.3□□□□□ -0.92
TRAF3IP3-213ENST00000478359 DEFB136Q30KP8 78 aa9.3□□□□□ -0.92
TRAF3IP3-213ENST00000478359 LGALS9BQ3B8N2 356 aa9.3□□□□□ -0.92
TRAF3IP3-213ENST00000478359 LGALS9CQ6DKI2 356 aa9.3□□□□□ -0.92
TRAF3IP3-213ENST00000478359 LINC00173Q6ZV60 143 aa9.3□□□□□ -0.92
TRAF3IP3-213ENST00000478359 TRAV12-3A0A0B4J271 114 aa9.3□□□□□ -0.92
TRAF3IP3-213ENST00000478359 TRAV25A0A0B4J276 109 aa9.3□□□□□ -0.92
TRAF3IP3-213ENST00000478359 GNRH2O43555 120 aa9.3□□□□□ -0.92
TRAF3IP3-213ENST00000478359 SMIM17P0DL12 118 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms