RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 STOML3Q8TAV4 291 aa15.84■□□□□ 0.13
TRAF4-211ENST00000478021 SDF2L1Q9HCN8 221 aa15.84■□□□□ 0.13
TRAF4-211ENST00000478021 MUC4Q99102 2169 aa15.84■□□□□ 0.13
TRAF4-211ENST00000478021 IGHV3-16A0A0C4DH30 117 aa15.83■□□□□ 0.12
TRAF4-211ENST00000478021 ZFP69Q49AA0 526 aa15.83■□□□□ 0.12
TRAF4-211ENST00000478021 VSIG2Q96IQ7 327 aa15.83■□□□□ 0.12
TRAF4-211ENST00000478021 C11orf21Q9P2W6 132 aa15.83■□□□□ 0.12
TRAF4-211ENST00000478021 CCL18P55774 89 aa15.82■□□□□ 0.12
TRAF4-211ENST00000478021 SMUG1Q53HV7 270 aa15.82■□□□□ 0.12
TRAF4-211ENST00000478021 SPXQ9BT56 116 aa15.82■□□□□ 0.12
TRAF4-211ENST00000478021 LINC00588Q9Y4M8 146 aa15.82■□□□□ 0.12
TRAF4-211ENST00000478021 DNAH10Q8IVF4 4471 aa15.82■□□□□ 0.12
TRAF4-211ENST00000478021 hCG_2014768A0A024R1R8 64 aa15.81■□□□□ 0.12
TRAF4-211ENST00000478021 UMAD1C9J7I0 102 aa15.81■□□□□ 0.12
TRAF4-211ENST00000478021 TPT1P13693 172 aaKnown RBP15.81■□□□□ 0.12
TRAF4-211ENST00000478021 EIF5AP63241 154 aaKnown RBP15.81■□□□□ 0.12
TRAF4-211ENST00000478021 CST9LP1Q5W188 147 aa15.81■□□□□ 0.12
TRAF4-211ENST00000478021 TCTE3Q8IZS6 198 aa15.81■□□□□ 0.12
TRAF4-211ENST00000478021 SFT2D1Q8WV19 159 aa15.81■□□□□ 0.12
TRAF4-211ENST00000478021 KCNS1Q96KK3 526 aa15.81■□□□□ 0.12
TRAF4-211ENST00000478021 NKX6-2Q9C056 277 aaPredicted RBP15.81■□□□□ 0.12
TRAF4-211ENST00000478021 ARL2-SNX15V9GYD0 113 aa15.81■□□□□ 0.12
TRAF4-211ENST00000478021 FBLL1A6NHQ2 334 aaKnown RBP15.8■□□□□ 0.12
TRAF4-211ENST00000478021 H3BNG1 76 aa15.8■□□□□ 0.12
TRAF4-211ENST00000478021 PFN1P07737 140 aaKnown RBP15.8■□□□□ 0.12
TRAF4-211ENST00000478021 SFTA3P0C7M3 94 aa15.8■□□□□ 0.12
TRAF4-211ENST00000478021 PPT1P50897 306 aa15.8■□□□□ 0.12
TRAF4-211ENST00000478021 SAPCD1Q5SSQ6 148 aa15.8■□□□□ 0.12
TRAF4-211ENST00000478021 Q86TA4 180 aa15.8■□□□□ 0.12
TRAF4-211ENST00000478021 FAM3BP58499 235 aaPredicted RBP15.79■□□□□ 0.12
TRAF4-211ENST00000478021 LGALSLQ3ZCW2 172 aaPredicted RBP15.79■□□□□ 0.12
TRAF4-211ENST00000478021 ZNRF2Q8NHG8 242 aa15.79■□□□□ 0.12
TRAF4-211ENST00000478021 MBD3L1Q8WWY6 194 aa15.79■□□□□ 0.12
TRAF4-211ENST00000478021 HIST1H2BAQ96A08 127 aa15.79■□□□□ 0.12
TRAF4-211ENST00000478021 PAGE4O60829 102 aa15.78■□□□□ 0.12
TRAF4-211ENST00000478021 FHL2Q14192 279 aa15.78■□□□□ 0.12
TRAF4-211ENST00000478021 Q6ZR54 194 aa15.78■□□□□ 0.12
TRAF4-211ENST00000478021 RASL10AQ92737 203 aa15.78■□□□□ 0.12
TRAF4-211ENST00000478021 ZNF479Q96JC4 524 aa15.78■□□□□ 0.12
TRAF4-211ENST00000478021 A0A096LPF7 62 aa15.77■□□□□ 0.12
TRAF4-211ENST00000478021 M0R2P5 195 aa15.77■□□□□ 0.12
TRAF4-211ENST00000478021 PAX4O43316 350 aa15.77■□□□□ 0.12
TRAF4-211ENST00000478021 DPPA3Q6W0C5 159 aa15.77■□□□□ 0.12
TRAF4-211ENST00000478021 TRGV4A0A0C4DH28 118 aa15.76■□□□□ 0.11
TRAF4-211ENST00000478021 H2AFB1P0C5Y9 115 aa15.76■□□□□ 0.11
TRAF4-211ENST00000478021 ESRGQ1W209 222 aa15.76■□□□□ 0.11
TRAF4-211ENST00000478021 PRO0255Q9UI72 69 aa15.76■□□□□ 0.11
TRAF4-211ENST00000478021 CRYBA4P53673 196 aa15.75■□□□□ 0.11
TRAF4-211ENST00000478021 UBE2G1P62253 170 aa15.75■□□□□ 0.11
TRAF4-211ENST00000478021 HHLA3Q9XRX5 114 aa15.75■□□□□ 0.11
TRAF4-211ENST00000478021 RTL8CO15255 209 aa15.74■□□□□ 0.11
TRAF4-211ENST00000478021 C1QBP02746 253 aa15.74■□□□□ 0.11
TRAF4-211ENST00000478021 FMC1Q96HJ9 113 aa15.74■□□□□ 0.11
TRAF4-211ENST00000478021 ICOSQ9Y6W8 199 aa15.74■□□□□ 0.11
TRAF4-211ENST00000478021 TRAV4A0A0B4J268 109 aa15.73■□□□□ 0.11
TRAF4-211ENST00000478021 C9JCJ5 164 aa15.73■□□□□ 0.11
TRAF4-211ENST00000478021 AKR1C3P42330 323 aa15.73■□□□□ 0.11
TRAF4-211ENST00000478021 AKAP14Q86UN6 197 aa15.73■□□□□ 0.11
TRAF4-211ENST00000478021 OR4C5Q8NGB2 326 aa15.73■□□□□ 0.11
TRAF4-211ENST00000478021 ZC2HC1AQ96GY0 325 aa15.73■□□□□ 0.11
TRAF4-211ENST00000478021 IGKV3D-20A0A0C4DH25 116 aa15.72■□□□□ 0.11
TRAF4-211ENST00000478021 FABP5P3A8MUU1 101 aa15.72■□□□□ 0.11
TRAF4-211ENST00000478021 SLAQ13239 276 aa15.72■□□□□ 0.11
TRAF4-211ENST00000478021 TCEAL7Q9BRU2 100 aa15.72■□□□□ 0.11
TRAF4-211ENST00000478021 NBDYA0A0U1RRE5 68 aa15.71■□□□□ 0.11
TRAF4-211ENST00000478021 LINC00336Q6ZUF6 198 aa15.71■□□□□ 0.11
TRAF4-211ENST00000478021 C9orf85Q96MD7 179 aa15.71■□□□□ 0.11
TRAF4-211ENST00000478021 ZFP30Q9Y2G7 519 aa15.71■□□□□ 0.11
TRAF4-211ENST00000478021 SCO2A0A1W2PP80 73 aa15.7■□□□□ 0.1
TRAF4-211ENST00000478021 RNASE3P12724 160 aaKnown RBP15.7■□□□□ 0.1
TRAF4-211ENST00000478021 CRIP1P50238 77 aa15.7■□□□□ 0.1
TRAF4-211ENST00000478021 ZNF876PQ49A33 203 aa15.7■□□□□ 0.1
TRAF4-211ENST00000478021 Q9H8V8 135 aa15.7■□□□□ 0.1
TRAF4-211ENST00000478021 MRPS16Q9Y3D3 137 aaKnown RBP15.7■□□□□ 0.1
TRAF4-211ENST00000478021 PGPEP1LA6NFU8 196 aa15.69■□□□□ 0.1
TRAF4-211ENST00000478021 ORM1P02763 201 aa15.69■□□□□ 0.1
TRAF4-211ENST00000478021 CCL20P78556 96 aa15.69■□□□□ 0.1
TRAF4-211ENST00000478021 EIF5AL1Q6IS14 154 aaKnown RBP15.69■□□□□ 0.1
TRAF4-211ENST00000478021 NHLRC2Q8NBF2 726 aa15.69■□□□□ 0.1
TRAF4-211ENST00000478021 TRBV6-1A0A0K0K1D8 114 aa15.68■□□□□ 0.1
TRAF4-211ENST00000478021 PRSS29PA6NIE9 313 aa15.68■□□□□ 0.1
TRAF4-211ENST00000478021 B4DEV8 164 aa15.68■□□□□ 0.1
TRAF4-211ENST00000478021 M0R036 132 aa15.68■□□□□ 0.1
TRAF4-211ENST00000478021 SH2D1AO60880 128 aa15.68■□□□□ 0.1
TRAF4-211ENST00000478021 LTAP01374 205 aa15.68■□□□□ 0.1
TRAF4-211ENST00000478021 S100A4P26447 101 aaKnown RBP15.68■□□□□ 0.1
TRAF4-211ENST00000478021 C1orf134Q5TEV5 83 aa15.68■□□□□ 0.1
TRAF4-211ENST00000478021 UPK3BQ9BT76 320 aa15.68■□□□□ 0.1
TRAF4-211ENST00000478021 GNG13Q9P2W3 67 aa15.68■□□□□ 0.1
TRAF4-211ENST00000478021 GYPEP15421 78 aa15.67■□□□□ 0.1
TRAF4-211ENST00000478021 ASIPP42127 132 aa15.67■□□□□ 0.1
TRAF4-211ENST00000478021 SULT1A2P50226 295 aa15.67■□□□□ 0.1
TRAF4-211ENST00000478021 RAB5CP51148 216 aa15.67■□□□□ 0.1
TRAF4-211ENST00000478021 MRPL23Q16540 153 aaKnown RBP15.67■□□□□ 0.1
TRAF4-211ENST00000478021 ZNF506Q5JVG8 444 aa15.67■□□□□ 0.1
TRAF4-211ENST00000478021 SLC51BQ86UW2 128 aa15.67■□□□□ 0.1
TRAF4-211ENST00000478021 LOC100131303A0A0U1RQF7 123 aa15.66■□□□□ 0.1
TRAF4-211ENST00000478021 K7EQD1 137 aa15.66■□□□□ 0.1
TRAF4-211ENST00000478021 RS1O15537 224 aa15.66■□□□□ 0.1
TRAF4-211ENST00000478021 FAM162BQ5T6X4 162 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms