RNA–Protein interactions for RNA: ENST00000477434.5

PDZRN3-206, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-206ENST00000477434 EIF3GO75821 320 aaKnown RBP eCLIP2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 CXorf1O96002 111 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 IGLV1-51P01701 117 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 HBE1P02100 147 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 OR10J4P0C629 311 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 NBEAP1P0C6P0 100 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 ARL14EPLP0DKL9 152 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 IGLC2P0DOY2 106 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 HIST1H1EP10412 219 aaKnown RBP2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 GP9P14770 177 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 BMI1P35226 326 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 GALR1P47211 349 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 PSMB3P49720 205 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 MEOX2P50222 304 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 PPT1P50897 306 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 INSL3P51460 131 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 RAB14P61106 215 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 PDE6HQ13956 83 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 GUK1Q16774 197 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 DEFB114Q30KQ6 69 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 KHDC3LQ587J8 217 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 CLLU1Q5K131 121 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 LEMD1Q68G75 181 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 SIGLEC15Q6ZMC9 328 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 DCANP1Q8TF63 244 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 TM2D3Q9BRN9 247 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 PAXXQ9BUH6 204 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 MAP1LC3BQ9GZQ8 125 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 SLC25A22Q9H936 323 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 TMEM167BQ9NRX6 74 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 MLXQ9UH92 298 aa2.85□□□□□ -1.95
PDZRN3-206ENST00000477434 TRBV19A0A075B6N1 114 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 TRAV2A0A0B4J234 112 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 TRAV25A0A0B4J276 109 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 A0A1W2PRE2 83 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 OR7C2O60412 319 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 ZNF253O75346 499 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 DNAH10OSP0CZ25 163 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 PYYP10082 97 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 GCHFRP30047 84 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 TAGLN2P37802 199 aaKnown RBP2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 FGF8P55075 233 aaPredicted RBP2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 PAFAH1B2P68402 229 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 CCL20P78556 96 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 C9orf66Q5T8R8 295 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 SAMD13Q5VXD3 122 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 TCF24Q7RTU0 167 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 LYPD1Q8N2G4 141 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 OR2K2Q8NGT1 345 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 PCNPQ8WW12 178 aaKnown RBP2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 NKX6-2Q9C056 277 aaPredicted RBP2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 MS4A6AQ9H2W1 248 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 NRN1Q9NPD7 142 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 MED9Q9NWA0 146 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 ZNF586Q9NXT0 402 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 ARL2-SNX15V9GYD0 113 aa2.84□□□□□ -1.95
PDZRN3-206ENST00000477434 TRAV8-2A0A0B4J237 113 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 A0A1B0GV50 99 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 FAM74A7A6NL05 159 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 H3BTX0 84 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 DNASE2O00115 360 aaPredicted RBP2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 UBE2CO00762 179 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 ISLRO14498 428 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 NDUFS6O75380 124 aaKnown RBP2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 SNRPCP09234 159 aaKnown RBP2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 KRTAP1-4P0C5Y4 121 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 ID1P41134 155 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 RANP62826 216 aaKnown RBP2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 UBE2L3P68036 154 aaKnown RBP2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 PSG9Q00887 426 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 HAGHQ16775 308 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 LCN12Q6JVE5 192 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 IQCF2Q8IXL9 164 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 TMEM61Q8N0U2 210 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 ARL6IP6Q8N6S5 226 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 DYNLRB2Q8TF09 96 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 BLNKQ8WV28 456 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 FAM210AQ96ND0 272 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 SPAG8Q99932 426 aaPredicted RBP2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 TXNDC17Q9BRA2 123 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 SLC50A1Q9BRV3 221 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 SMDT1Q9H4I9 107 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 JPT2Q9H910 190 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 MANBALQ9NQG1 85 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 ZNF331Q9NQX6 463 aaPredicted RBP2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 CLEC5AQ9NY25 188 aa2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 YTHDF2Q9Y5A9 579 aaKnown RBP2.83□□□□□ -1.96
PDZRN3-206ENST00000477434 IGKV3-7A0A075B6H7 116 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 RAB19A4D1S5 217 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 LINC00862A6NCI5 91 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 PGPA6NDG6 321 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 RBFOX3A6NFN3 312 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 OR4C46A6NHA9 309 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 GGTLC3B5MD39 225 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 K7EQG2 157 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 M0R3E3 92 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 SLC17A3O00476 420 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 IFNA1P01562 189 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms