RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 H3BRN7 92 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 M0R1W7 72 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 FCER1GP30273 86 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 CKS2P33552 79 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 LEPP41159 167 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 UCNP55089 124 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 FANCD2OSQ96PS1 177 aa10.06□□□□□ -0.8
CCNL1-216ENST00000475298 CELSR1Q9NYQ6 3014 aa10.05□□□□□ -0.8
CCNL1-216ENST00000475298 COL12A1Q99715 3063 aa10.05□□□□□ -0.8
CCNL1-216ENST00000475298 TRBV19A0A075B6N1 114 aa10.05□□□□□ -0.8
CCNL1-216ENST00000475298 TRAV40A0A0B4J280 105 aa10.05□□□□□ -0.8
CCNL1-216ENST00000475298 CCDC179H3BU77 68 aa10.05□□□□□ -0.8
CCNL1-216ENST00000475298 GAS8-AS1O95177 125 aa10.05□□□□□ -0.8
CCNL1-216ENST00000475298 SRD5A1P18405 259 aa10.05□□□□□ -0.8
CCNL1-216ENST00000475298 LY6DQ14210 128 aa10.05□□□□□ -0.8
CCNL1-216ENST00000475298 KIR2DL4Q99706 377 aa10.05□□□□□ -0.8
CCNL1-216ENST00000475298 VPS13CQ709C8 3753 aa10.05□□□□□ -0.8
CCNL1-216ENST00000475298 M0R3E3 92 aa10.04□□□□□ -0.8
CCNL1-216ENST00000475298 TEN1Q86WV5 123 aa10.04□□□□□ -0.8
CCNL1-216ENST00000475298 TMEM160Q9NX00 188 aa10.04□□□□□ -0.8
CCNL1-216ENST00000475298 RHODO00212 210 aa10.04□□□□□ -0.8
CCNL1-216ENST00000475298 SIGLEC15Q6ZMC9 328 aa10.04□□□□□ -0.8
CCNL1-216ENST00000475298 ZFP2Q6ZN57 461 aa10.04□□□□□ -0.8
CCNL1-216ENST00000475298 TMEM75Q8N9X5 138 aa10.04□□□□□ -0.8
CCNL1-216ENST00000475298 TMSB15BA0A087X1C1 80 aa10.03□□□□□ -0.8
CCNL1-216ENST00000475298 F8W735 103 aaPredicted RBP10.03□□□□□ -0.8
CCNL1-216ENST00000475298 HOXA3O43365 443 aaPredicted RBP10.03□□□□□ -0.8
CCNL1-216ENST00000475298 AJUBAQ96IF1 538 aa10.03□□□□□ -0.8
CCNL1-216ENST00000475298 MRPL35Q9NZE8 188 aaKnown RBP10.03□□□□□ -0.8
CCNL1-216ENST00000475298 IGLV11-55A0A075B6I3 123 aa10.03□□□□□ -0.8
CCNL1-216ENST00000475298 IGHV3OR16-8A0A075B7F1 116 aa10.03□□□□□ -0.8
CCNL1-216ENST00000475298 ZNF688P0C7X2 276 aa10.03□□□□□ -0.8
CCNL1-216ENST00000475298 PSMB2P49721 201 aa10.03□□□□□ -0.8
CCNL1-216ENST00000475298 TWIST1Q15672 202 aa10.03□□□□□ -0.8
CCNL1-216ENST00000475298 C8orf49Q96NF6 230 aa10.03□□□□□ -0.8
CCNL1-216ENST00000475298 HIF1ANQ9NWT6 349 aa10.03□□□□□ -0.8
CCNL1-216ENST00000475298 A0A087WX48 190 aa10.02□□□□□ -0.8
CCNL1-216ENST00000475298 GAGE12JA6NER3 117 aa10.02□□□□□ -0.8
CCNL1-216ENST00000475298 LINC01619G3V211 115 aa10.02□□□□□ -0.8
CCNL1-216ENST00000475298 MRPS12O15235 138 aaKnown RBP10.02□□□□□ -0.8
CCNL1-216ENST00000475298 GAGE7O76087 117 aa10.02□□□□□ -0.8
CCNL1-216ENST00000475298 GAGE12FP0CL80 117 aa10.02□□□□□ -0.8
CCNL1-216ENST00000475298 GAGE12GP0CL81 117 aa10.02□□□□□ -0.8
CCNL1-216ENST00000475298 GAGE12IP0CL82 117 aa10.02□□□□□ -0.8
CCNL1-216ENST00000475298 NDUFV3P56181 108 aaKnown RBP10.02□□□□□ -0.8
CCNL1-216ENST00000475298 GAGE4Q13068 117 aa10.02□□□□□ -0.8
CCNL1-216ENST00000475298 RAX2Q96IS3 184 aa10.02□□□□□ -0.8
CCNL1-216ENST00000475298 IGHV3-35A0A0C4DH35 117 aa10.02□□□□□ -0.81
CCNL1-216ENST00000475298 FABP5P3A8MUU1 101 aa10.02□□□□□ -0.81
CCNL1-216ENST00000475298 VCX2Q9H322 139 aa10.02□□□□□ -0.81
CCNL1-216ENST00000475298 UBTD1Q9HAC8 227 aa10.02□□□□□ -0.81
CCNL1-216ENST00000475298 SPTAN1Q13813 2472 aaKnown RBP10.01□□□□□ -0.81
CCNL1-216ENST00000475298 ATP5LO75964 103 aa10.01□□□□□ -0.81
CCNL1-216ENST00000475298 UBE2D3P61077 147 aa10.01□□□□□ -0.81
CCNL1-216ENST00000475298 UBE2D2P62837 147 aa10.01□□□□□ -0.81
CCNL1-216ENST00000475298 SFTA2Q6UW10 78 aa10.01□□□□□ -0.81
CCNL1-216ENST00000475298 DTX2Q86UW9 622 aa10.01□□□□□ -0.81
CCNL1-216ENST00000475298 SBSPONQ8IVN8 264 aa10.01□□□□□ -0.81
CCNL1-216ENST00000475298 RNF185Q96GF1 192 aa10.01□□□□□ -0.81
CCNL1-216ENST00000475298 MAP1LC3AQ9H492 121 aa10.01□□□□□ -0.81
CCNL1-216ENST00000475298 KMT2BQ9UMN6 2715 aaPredicted RBP10.01□□□□□ -0.81
CCNL1-216ENST00000475298 TRBV20-1A0A075B6N2 111 aa10.01□□□□□ -0.81
CCNL1-216ENST00000475298 MFAP4P55083 255 aa10.01□□□□□ -0.81
CCNL1-216ENST00000475298 Q8N6K4 173 aa10.01□□□□□ -0.81
CCNL1-216ENST00000475298 LINC01549A6NIU2 74 aa10□□□□□ -0.81
CCNL1-216ENST00000475298 EGR2P11161 476 aaPredicted RBP10□□□□□ -0.81
CCNL1-216ENST00000475298 C21orf62Q9NYP8 219 aa10□□□□□ -0.81
CCNL1-216ENST00000475298 MAP1AP78559 2803 aaPredicted RBP10□□□□□ -0.81
CCNL1-216ENST00000475298 IGHV7-81A0A0B4J1V7 117 aa9.99□□□□□ -0.81
CCNL1-216ENST00000475298 IGFL4Q6B9Z1 124 aa9.99□□□□□ -0.81
CCNL1-216ENST00000475298 ZNF575Q86XF7 245 aa9.99□□□□□ -0.81
CCNL1-216ENST00000475298 SIRPDQ9H106 197 aa9.99□□□□□ -0.81
CCNL1-216ENST00000475298 LOC107984156A0A0G2JMH3 177 aa9.99□□□□□ -0.81
CCNL1-216ENST00000475298 MYMXA0A1B0GTQ4 84 aa9.99□□□□□ -0.81
CCNL1-216ENST00000475298 SH2D1AO60880 128 aa9.99□□□□□ -0.81
CCNL1-216ENST00000475298 CLEC3BP05452 202 aa9.99□□□□□ -0.81
CCNL1-216ENST00000475298 UBE2D1P51668 147 aa9.99□□□□□ -0.81
CCNL1-216ENST00000475298 LINC01559Q495D7 138 aa9.99□□□□□ -0.81
CCNL1-216ENST00000475298 ARL17AQ8IVW1 177 aa9.99□□□□□ -0.81
CCNL1-216ENST00000475298 ANKRD29Q8N6D5 301 aa9.99□□□□□ -0.81
CCNL1-216ENST00000475298 MSRB1Q9NZV6 116 aa9.99□□□□□ -0.81
CCNL1-216ENST00000475298 TRAV4A0A0B4J268 109 aa9.98□□□□□ -0.81
CCNL1-216ENST00000475298 TMEM262E9PQX1 116 aa9.98□□□□□ -0.81
CCNL1-216ENST00000475298 CRLF1O75462 422 aa9.98□□□□□ -0.81
CCNL1-216ENST00000475298 Q8N9W7 124 aa9.98□□□□□ -0.81
CCNL1-216ENST00000475298 IGKV2-40A0A087WW87 121 aaPredicted RBP9.97□□□□□ -0.81
CCNL1-216ENST00000475298 TNFRSF6BO95407 300 aa9.97□□□□□ -0.81
CCNL1-216ENST00000475298 TCL1BO95988 128 aa9.97□□□□□ -0.81
CCNL1-216ENST00000475298 IGKV2D-40P01614 121 aaPredicted RBP9.97□□□□□ -0.81
CCNL1-216ENST00000475298 GATA1P15976 413 aaPredicted RBP9.97□□□□□ -0.81
CCNL1-216ENST00000475298 NXT2Q9NPJ8 142 aaKnown RBP9.97□□□□□ -0.81
CCNL1-216ENST00000475298 IGLV2-18A0A075B6J9 118 aa9.97□□□□□ -0.81
CCNL1-216ENST00000475298 CENPVL3A0A0U1RRI6 287 aa9.97□□□□□ -0.81
CCNL1-216ENST00000475298 C19orf84I3L1E1 186 aa9.97□□□□□ -0.81
CCNL1-216ENST00000475298 CTSGP08311 255 aa9.97□□□□□ -0.81
CCNL1-216ENST00000475298 HLA-DMBP28068 263 aa9.97□□□□□ -0.81
CCNL1-216ENST00000475298 GAGE2BQ13066 116 aa9.97□□□□□ -0.81
CCNL1-216ENST00000475298 ECSCRQ19T08 205 aa9.97□□□□□ -0.81
CCNL1-216ENST00000475298 GAGE2EQ4V326 116 aa9.97□□□□□ -0.81
CCNL1-216ENST00000475298 BPESC1Q9GZL8 116 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms