RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 LINC00467Q9BRT7 94 aa7.24□□□□□ -1.25
COL8A1-206ENST00000474648 NIPSNAP3BQ9BS92 247 aa7.24□□□□□ -1.25
COL8A1-206ENST00000474648 SEC11CQ9BY50 192 aa7.24□□□□□ -1.25
COL8A1-206ENST00000474648 RETNQ9HD89 108 aa7.24□□□□□ -1.25
COL8A1-206ENST00000474648 TP53TG1Q9Y2A0 90 aa7.24□□□□□ -1.25
COL8A1-206ENST00000474648 GOLT1BQ9Y3E0 138 aa7.24□□□□□ -1.25
COL8A1-206ENST00000474648 X6R8D5 127 aa7.24□□□□□ -1.25
COL8A1-206ENST00000474648 IGHV1OR15-1A0A075B7D0 117 aa7.23□□□□□ -1.25
COL8A1-206ENST00000474648 ZNF705GA8MUZ8 300 aaPredicted RBP7.23□□□□□ -1.25
COL8A1-206ENST00000474648 H7BYZ3 331 aa7.23□□□□□ -1.25
COL8A1-206ENST00000474648 AZU1P20160 251 aa7.23□□□□□ -1.25
COL8A1-206ENST00000474648 TDRG1Q3Y452 100 aa7.23□□□□□ -1.25
COL8A1-206ENST00000474648 ANXA2RQ3ZCQ2 193 aa7.23□□□□□ -1.25
COL8A1-206ENST00000474648 MUC21Q5SSG8 566 aa7.23□□□□□ -1.25
COL8A1-206ENST00000474648 TMEM256Q8N2U0 113 aa7.23□□□□□ -1.25
COL8A1-206ENST00000474648 NUDT10Q8NFP7 164 aa7.23□□□□□ -1.25
COL8A1-206ENST00000474648 ISOC2Q96AB3 205 aa7.23□□□□□ -1.25
COL8A1-206ENST00000474648 NUDT11Q96G61 164 aa7.23□□□□□ -1.25
COL8A1-206ENST00000474648 NEU1Q99519 415 aa7.23□□□□□ -1.25
COL8A1-206ENST00000474648 RNASE7Q9H1E1 156 aaKnown RBP7.23□□□□□ -1.25
COL8A1-206ENST00000474648 BIN3Q9NQY0 253 aa7.23□□□□□ -1.25
COL8A1-206ENST00000474648 TP53TG3Q9ULZ0 132 aa7.23□□□□□ -1.25
COL8A1-206ENST00000474648 CARHSP1Q9Y2V2 147 aaKnown RBP7.23□□□□□ -1.25
COL8A1-206ENST00000474648 TENM3Q9P273 2699 aa7.22□□□□□ -1.25
COL8A1-206ENST00000474648 IGHV3OR16-12A0A075B7B8 117 aa7.22□□□□□ -1.25
COL8A1-206ENST00000474648 KRBOX1C9JBD0 128 aa7.22□□□□□ -1.25
COL8A1-206ENST00000474648 GNRH2O43555 120 aa7.22□□□□□ -1.25
COL8A1-206ENST00000474648 ADIRFQ15847 76 aa7.22□□□□□ -1.25
COL8A1-206ENST00000474648 FAM231DQ6ZW35 169 aa7.22□□□□□ -1.25
COL8A1-206ENST00000474648 OR11H2Q8NH07 326 aa7.22□□□□□ -1.25
COL8A1-206ENST00000474648 PYGO2Q9BRQ0 406 aa7.22□□□□□ -1.25
COL8A1-206ENST00000474648 TMEM208Q9BTX3 173 aa7.22□□□□□ -1.25
COL8A1-206ENST00000474648 SMIM9A6NGZ8 99 aa7.21□□□□□ -1.26
COL8A1-206ENST00000474648 ORM1P02763 201 aa7.21□□□□□ -1.26
COL8A1-206ENST00000474648 RPL19P84098 196 aaKnown RBP7.21□□□□□ -1.26
COL8A1-206ENST00000474648 FAM159AQ6UWV7 190 aa7.21□□□□□ -1.26
COL8A1-206ENST00000474648 Q8N3U1 123 aa7.21□□□□□ -1.26
COL8A1-206ENST00000474648 DAZAP1Q96EP5 407 aaKnown RBP7.21□□□□□ -1.26
COL8A1-206ENST00000474648 SPATA25Q9BR10 227 aa7.21□□□□□ -1.26
COL8A1-206ENST00000474648 OSTCQ9NRP0 149 aa7.21□□□□□ -1.26
COL8A1-206ENST00000474648 NAGKQ9UJ70 344 aa7.21□□□□□ -1.26
COL8A1-206ENST00000474648 IGHV3-16A0A0C4DH30 117 aa7.2□□□□□ -1.26
COL8A1-206ENST00000474648 TMEM238LA0A1B0GVL6 79 aa7.2□□□□□ -1.26
COL8A1-206ENST00000474648 PLAC8L1A1L4L8 177 aa7.2□□□□□ -1.26
COL8A1-206ENST00000474648 TMEM189A5PLL7 270 aa7.2□□□□□ -1.26
COL8A1-206ENST00000474648 B4DEV8 164 aa7.2□□□□□ -1.26
COL8A1-206ENST00000474648 M0R036 132 aa7.2□□□□□ -1.26
COL8A1-206ENST00000474648 TYMSP04818 313 aa7.2□□□□□ -1.26
COL8A1-206ENST00000474648 HTN1P15515 57 aa7.2□□□□□ -1.26
COL8A1-206ENST00000474648 ERVFC1-1P60608 527 aa7.2□□□□□ -1.26
COL8A1-206ENST00000474648 PNRC1Q12796 327 aaPredicted RBP7.2□□□□□ -1.26
COL8A1-206ENST00000474648 Q8NAQ8 132 aa7.2□□□□□ -1.26
COL8A1-206ENST00000474648 C11orf72Q8NBR9 251 aa7.2□□□□□ -1.26
COL8A1-206ENST00000474648 SFRP2Q96HF1 295 aa7.2□□□□□ -1.26
COL8A1-206ENST00000474648 KCNS1Q96KK3 526 aa7.2□□□□□ -1.26
COL8A1-206ENST00000474648 MDFICQ9P1T7 246 aa7.2□□□□□ -1.26
COL8A1-206ENST00000474648 TMSB15BA0A087X1C1 80 aa7.19□□□□□ -1.26
COL8A1-206ENST00000474648 IGHV4-28A0A0C4DH34 117 aa7.19□□□□□ -1.26
COL8A1-206ENST00000474648 GRIFINA4D1Z8 144 aa7.19□□□□□ -1.26
COL8A1-206ENST00000474648 CBY3A6NI87 242 aa7.19□□□□□ -1.26
COL8A1-206ENST00000474648 GATCO43716 136 aaKnown RBP7.19□□□□□ -1.26
COL8A1-206ENST00000474648 P01737 135 aa7.19□□□□□ -1.26
COL8A1-206ENST00000474648 NHLRC4P0CG21 123 aaPredicted RBP7.19□□□□□ -1.26
COL8A1-206ENST00000474648 RRN3P1Q2M238 152 aa7.19□□□□□ -1.26
COL8A1-206ENST00000474648 DNLZQ5SXM8 178 aa7.19□□□□□ -1.26
COL8A1-206ENST00000474648 IBA57Q5T440 356 aaKnown RBP7.19□□□□□ -1.26
COL8A1-206ENST00000474648 OR2D3Q8NGH3 330 aa7.19□□□□□ -1.26
COL8A1-206ENST00000474648 OR10G8Q8NGN5 311 aa7.19□□□□□ -1.26
COL8A1-206ENST00000474648 RNASE8Q8TDE3 154 aaKnown RBP7.19□□□□□ -1.26
COL8A1-206ENST00000474648 RPP21Q9H633 154 aaKnown RBP7.19□□□□□ -1.26
COL8A1-206ENST00000474648 V9GYV3 84 aa7.19□□□□□ -1.26
COL8A1-206ENST00000474648 APOC3P02656 99 aa7.18□□□□□ -1.26
COL8A1-206ENST00000474648 CXCL1P09341 107 aa7.18□□□□□ -1.26
COL8A1-206ENST00000474648 GZMBP10144 247 aa7.18□□□□□ -1.26
COL8A1-206ENST00000474648 RNASE3P12724 160 aaKnown RBP7.18□□□□□ -1.26
COL8A1-206ENST00000474648 MIFP14174 115 aa7.18□□□□□ -1.26
COL8A1-206ENST00000474648 RPS20P60866 119 aaKnown RBP7.18□□□□□ -1.26
COL8A1-206ENST00000474648 ZNF493Q6ZR52 646 aa7.18□□□□□ -1.26
COL8A1-206ENST00000474648 CLRN3Q8NCR9 226 aa7.18□□□□□ -1.26
COL8A1-206ENST00000474648 IL17DQ8TAD2 202 aa7.18□□□□□ -1.26
COL8A1-206ENST00000474648 TMEM263Q8WUH6 116 aaKnown RBP7.18□□□□□ -1.26
COL8A1-206ENST00000474648 GSN-AS1Q9NRJ2 163 aa7.18□□□□□ -1.26
COL8A1-206ENST00000474648 TRGV11A0A075B6L2 103 aa7.17□□□□□ -1.26
COL8A1-206ENST00000474648 DEFB4AO15263 64 aa7.17□□□□□ -1.26
COL8A1-206ENST00000474648 RNF212Q495C1 297 aa7.17□□□□□ -1.26
COL8A1-206ENST00000474648 CT83Q5H943 113 aa7.17□□□□□ -1.26
COL8A1-206ENST00000474648 XP32Q5T750 250 aa7.17□□□□□ -1.26
COL8A1-206ENST00000474648 C15orf54Q8N8G6 183 aa7.17□□□□□ -1.26
COL8A1-206ENST00000474648 GTSF1Q8WW33 167 aa7.17□□□□□ -1.26
COL8A1-206ENST00000474648 C9orf85Q96MD7 179 aa7.17□□□□□ -1.26
COL8A1-206ENST00000474648 ZMAT4Q9H898 229 aa7.17□□□□□ -1.26
COL8A1-206ENST00000474648 SCRT2Q9NQ03 307 aa7.17□□□□□ -1.26
COL8A1-206ENST00000474648 COL7A1Q02388 2944 aa7.17□□□□□ -1.26
COL8A1-206ENST00000474648 C7orf77A4D0Y5 90 aa7.16□□□□□ -1.26
COL8A1-206ENST00000474648 ARMS2P0C7Q2 107 aa7.16□□□□□ -1.26
COL8A1-206ENST00000474648 IGLC6P0CF74 106 aa7.16□□□□□ -1.26
COL8A1-206ENST00000474648 ASIPP42127 132 aa7.16□□□□□ -1.26
COL8A1-206ENST00000474648 FOXA3P55318 350 aaPredicted RBP7.16□□□□□ -1.26
COL8A1-206ENST00000474648 TCL1AP56279 114 aa7.16□□□□□ -1.26
COL8A1-206ENST00000474648 DAZ2Q13117 558 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms