RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 AMTNQ6UX39 209 aa7.57□□□□□ -1.2
PRPF38A-202ENST00000474048 FER1L6-AS1Q8NA97 138 aa7.57□□□□□ -1.2
PRPF38A-202ENST00000474048 PYGO2Q9BRQ0 406 aa7.57□□□□□ -1.2
PRPF38A-202ENST00000474048 CSTL1Q9H114 145 aa7.57□□□□□ -1.2
PRPF38A-202ENST00000474048 C19orf73Q9NVV2 129 aa7.57□□□□□ -1.2
PRPF38A-202ENST00000474048 TIMM8BQ9Y5J9 83 aaPredicted RBP7.57□□□□□ -1.2
PRPF38A-202ENST00000474048 KIR2DL5BA0A0G2JN68 375 aa7.56□□□□□ -1.2
PRPF38A-202ENST00000474048 KIR2DL5BA0A0G2JPC4 375 aa7.56□□□□□ -1.2
PRPF38A-202ENST00000474048 GRIFINA4D1Z8 144 aa7.56□□□□□ -1.2
PRPF38A-202ENST00000474048 HIGD1CA8MV81 97 aa7.56□□□□□ -1.2
PRPF38A-202ENST00000474048 S100A8P05109 93 aa7.56□□□□□ -1.2
PRPF38A-202ENST00000474048 CRIP1P50238 77 aa7.56□□□□□ -1.2
PRPF38A-202ENST00000474048 ANXA2RQ3ZCQ2 193 aa7.56□□□□□ -1.2
PRPF38A-202ENST00000474048 PRR9Q5T870 116 aa7.56□□□□□ -1.2
PRPF38A-202ENST00000474048 SAMD5Q5TGI4 173 aa7.56□□□□□ -1.2
PRPF38A-202ENST00000474048 LINC00322Q6ZN03 302 aaPredicted RBP7.56□□□□□ -1.2
PRPF38A-202ENST00000474048 SMIM15Q7Z3B0 74 aa7.56□□□□□ -1.2
PRPF38A-202ENST00000474048 KIR2DL5AQ8N109 375 aa7.56□□□□□ -1.2
PRPF38A-202ENST00000474048 KIR2DL5BQ8NHK3 375 aa7.56□□□□□ -1.2
PRPF38A-202ENST00000474048 COL6A5A8TX70 2615 aa7.56□□□□□ -1.2
PRPF38A-202ENST00000474048 AGRNO00468 2067 aa7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 STAB1Q9NY15 2570 aa7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 RBMY1BA6NDE4 496 aaKnown RBP7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 RBMY1EA6NEQ0 496 aaKnown RBP7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 F2Z2F3 143 aa7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 UBE2CO00762 179 aa7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 CXCL1P09341 107 aa7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 RBMY1DP0C7P1 496 aaKnown RBP7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 IGHV4-30-4P0DP06 118 aa7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 RAB4BP61018 213 aa7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 ZNF415Q09FC8 603 aa7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 RIGQ13278 110 aa7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 SPANXN1Q5VSR9 72 aa7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 PGLYRP4Q96LB8 373 aa7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 NEU1Q99519 415 aa7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 PHLDA3Q9Y5J5 127 aa7.55□□□□□ -1.2
PRPF38A-202ENST00000474048 SMIM27A0A1W2PRY6 76 aa7.54□□□□□ -1.2
PRPF38A-202ENST00000474048 GZMBP10144 247 aa7.54□□□□□ -1.2
PRPF38A-202ENST00000474048 FAM3BP58499 235 aaPredicted RBP7.54□□□□□ -1.2
PRPF38A-202ENST00000474048 KIR3DS1Q14943 382 aa7.54□□□□□ -1.2
PRPF38A-202ENST00000474048 COX19Q49B96 90 aa7.54□□□□□ -1.2
PRPF38A-202ENST00000474048 C4orf48Q5BLP8 95 aa7.54□□□□□ -1.2
PRPF38A-202ENST00000474048 SYT8Q8NBV8 401 aa7.54□□□□□ -1.2
PRPF38A-202ENST00000474048 A0A1B0GUT8 65 aa7.53□□□□□ -1.2
PRPF38A-202ENST00000474048 A0A1B0GW15 77 aa7.53□□□□□ -1.2
PRPF38A-202ENST00000474048 SNURFLB1AK76 121 aa7.53□□□□□ -1.2
PRPF38A-202ENST00000474048 H3BVH4 76 aa7.53□□□□□ -1.2
PRPF38A-202ENST00000474048 SPINK4O60575 86 aa7.53□□□□□ -1.2
PRPF38A-202ENST00000474048 KRTAP10-11P60412 298 aa7.53□□□□□ -1.2
PRPF38A-202ENST00000474048 CACNG7P62955 275 aa7.53□□□□□ -1.2
PRPF38A-202ENST00000474048 RRN3P1Q2M238 152 aa7.53□□□□□ -1.2
PRPF38A-202ENST00000474048 MRPL54Q6P161 138 aaKnown RBP7.53□□□□□ -1.2
PRPF38A-202ENST00000474048 WDR73Q6P4I2 378 aa7.53□□□□□ -1.2
PRPF38A-202ENST00000474048 ATP5L2Q7Z4Y8 100 aa7.53□□□□□ -1.2
PRPF38A-202ENST00000474048 Q8N1Y9 231 aa7.53□□□□□ -1.2
PRPF38A-202ENST00000474048 FAM210BQ96KR6 192 aa7.53□□□□□ -1.2
PRPF38A-202ENST00000474048 IGKV3D-20A0A0C4DH25 116 aa7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 CRXO43186 299 aaPredicted RBP7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 ZNF324O75467 553 aaPredicted RBP7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 TYMSP04818 313 aa7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 MED14OSP0DP75 135 aa7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 SSTP61278 116 aa7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 HBBP68871 147 aa7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 ELOBQ15370 118 aa7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 TWIST1Q15672 202 aa7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 TDRG1Q3Y452 100 aa7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 DEFB121Q5J5C9 76 aa7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 LYZL1Q6UWQ5 148 aa7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 ZFP82Q8N141 532 aa7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 NUP35Q8NFH5 326 aa7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 C16orf74Q96GX8 76 aa7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 RCHY1Q96PM5 261 aa7.52□□□□□ -1.21
PRPF38A-202ENST00000474048 TRBV24-1A0A075B6N3 115 aa7.51□□□□□ -1.21
PRPF38A-202ENST00000474048 TGIF2-C20orf24A0A0A6YYL0 155 aa7.51□□□□□ -1.21
PRPF38A-202ENST00000474048 M0R381 172 aa7.51□□□□□ -1.21
PRPF38A-202ENST00000474048 MT-ND6P03923 174 aa7.51□□□□□ -1.21
PRPF38A-202ENST00000474048 ARMS2P0C7Q2 107 aa7.51□□□□□ -1.21
PRPF38A-202ENST00000474048 TRGC1P0CF51 173 aa7.51□□□□□ -1.21
PRPF38A-202ENST00000474048 SMIM17P0DL12 118 aa7.51□□□□□ -1.21
PRPF38A-202ENST00000474048 CTRLP40313 264 aa7.51□□□□□ -1.21
PRPF38A-202ENST00000474048 RPS10P46783 165 aaKnown RBP7.51□□□□□ -1.21
PRPF38A-202ENST00000474048 CAMPP49913 170 aa7.51□□□□□ -1.21
PRPF38A-202ENST00000474048 DEFB135Q30KP9 77 aa7.51□□□□□ -1.21
PRPF38A-202ENST00000474048 RASL11AQ6T310 242 aa7.51□□□□□ -1.21
PRPF38A-202ENST00000474048 FRZBQ92765 325 aa7.51□□□□□ -1.21
PRPF38A-202ENST00000474048 LINC00467Q9BRT7 94 aa7.51□□□□□ -1.21
PRPF38A-202ENST00000474048 C11orf21Q9P2W6 132 aa7.51□□□□□ -1.21
PRPF38A-202ENST00000474048 NOTCH3Q9UM47 2321 aa7.5□□□□□ -1.21
PRPF38A-202ENST00000474048 GNRH2O43555 120 aa7.5□□□□□ -1.21
PRPF38A-202ENST00000474048 OR5AL1P0C617 328 aa7.5□□□□□ -1.21
PRPF38A-202ENST00000474048 Q6ZQT7 251 aa7.5□□□□□ -1.21
PRPF38A-202ENST00000474048 ZNF493Q6ZR52 646 aa7.5□□□□□ -1.21
PRPF38A-202ENST00000474048 TMEM263Q8WUH6 116 aaKnown RBP7.5□□□□□ -1.21
PRPF38A-202ENST00000474048 GTSF1Q8WW33 167 aa7.5□□□□□ -1.21
PRPF38A-202ENST00000474048 AP1S3Q96PC3 154 aa7.5□□□□□ -1.21
PRPF38A-202ENST00000474048 SPXQ9BT56 116 aa7.5□□□□□ -1.21
PRPF38A-202ENST00000474048 IGHV3-16A0A0C4DH30 117 aa7.49□□□□□ -1.21
PRPF38A-202ENST00000474048 SMIM9A6NGZ8 99 aa7.49□□□□□ -1.21
PRPF38A-202ENST00000474048 A8MZ25 164 aa7.49□□□□□ -1.21
PRPF38A-202ENST00000474048 HLA-DQA1P01909 254 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms