RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 MDFICQ9P1T7 246 aa9.99□□□□□ -0.81
VAMP4-203ENST00000474047 GNRH2O43555 120 aa9.98□□□□□ -0.81
VAMP4-203ENST00000474047 C1QBP02746 253 aa9.98□□□□□ -0.81
VAMP4-203ENST00000474047 UBE2G1P62253 170 aa9.98□□□□□ -0.81
VAMP4-203ENST00000474047 LGALSLQ3ZCW2 172 aaPredicted RBP9.98□□□□□ -0.81
VAMP4-203ENST00000474047 RNF212Q495C1 297 aa9.98□□□□□ -0.81
VAMP4-203ENST00000474047 MBD3L1Q8WWY6 194 aa9.98□□□□□ -0.81
VAMP4-203ENST00000474047 LINC00479Q96M42 142 aa9.98□□□□□ -0.81
VAMP4-203ENST00000474047 PLECQ15149 4684 aaKnown RBP9.97□□□□□ -0.81
VAMP4-203ENST00000474047 IGLV2-11P01706 119 aa9.97□□□□□ -0.81
VAMP4-203ENST00000474047 IGHV3-53P01767 116 aa9.97□□□□□ -0.81
VAMP4-203ENST00000474047 HOXA5P20719 270 aa9.97□□□□□ -0.81
VAMP4-203ENST00000474047 TDRG1Q3Y452 100 aa9.97□□□□□ -0.81
VAMP4-203ENST00000474047 PAGE4O60829 102 aa9.96□□□□□ -0.81
VAMP4-203ENST00000474047 PFN1P07737 140 aaKnown RBP9.96□□□□□ -0.81
VAMP4-203ENST00000474047 CCL18P55774 89 aa9.96□□□□□ -0.81
VAMP4-203ENST00000474047 C18orf15Q96N68 181 aa9.96□□□□□ -0.81
VAMP4-203ENST00000474047 ARL2-SNX15V9GYD0 113 aa9.96□□□□□ -0.81
VAMP4-203ENST00000474047 SACSQ9NZJ4 4579 aa9.96□□□□□ -0.82
VAMP4-203ENST00000474047 TEX46H3BTG2 121 aa9.96□□□□□ -0.82
VAMP4-203ENST00000474047 ZNF80P51504 273 aaPredicted RBP9.96□□□□□ -0.82
VAMP4-203ENST00000474047 TCEAL7Q9BRU2 100 aa9.96□□□□□ -0.82
VAMP4-203ENST00000474047 IGHV3-16A0A0C4DH30 117 aa9.95□□□□□ -0.82
VAMP4-203ENST00000474047 M0R2N4 97 aa9.95□□□□□ -0.82
VAMP4-203ENST00000474047 TYMSP04818 313 aa9.95□□□□□ -0.82
VAMP4-203ENST00000474047 AKR1C3P42330 323 aa9.95□□□□□ -0.82
VAMP4-203ENST00000474047 RAB5CP51148 216 aa9.95□□□□□ -0.82
VAMP4-203ENST00000474047 FMC1Q96HJ9 113 aa9.95□□□□□ -0.82
VAMP4-203ENST00000474047 TRGV4A0A0C4DH28 118 aa9.94□□□□□ -0.82
VAMP4-203ENST00000474047 FABP5P3A8MUU1 101 aa9.94□□□□□ -0.82
VAMP4-203ENST00000474047 M0R2P5 195 aa9.94□□□□□ -0.82
VAMP4-203ENST00000474047 Q86TA4 180 aa9.94□□□□□ -0.82
VAMP4-203ENST00000474047 SLC51BQ86UW2 128 aa9.94□□□□□ -0.82
VAMP4-203ENST00000474047 ZFP30Q9Y2G7 519 aa9.94□□□□□ -0.82
VAMP4-203ENST00000474047 IGLV2-18A0A075B6J9 118 aa9.93□□□□□ -0.82
VAMP4-203ENST00000474047 PAX4O43316 350 aa9.93□□□□□ -0.82
VAMP4-203ENST00000474047 FAM3BP58499 235 aaPredicted RBP9.93□□□□□ -0.82
VAMP4-203ENST00000474047 SLAQ13239 276 aa9.93□□□□□ -0.82
VAMP4-203ENST00000474047 H3BNG1 76 aa9.93□□□□□ -0.82
VAMP4-203ENST00000474047 RASL10AQ92737 203 aa9.93□□□□□ -0.82
VAMP4-203ENST00000474047 HHLA3Q9XRX5 114 aa9.93□□□□□ -0.82
VAMP4-203ENST00000474047 DNAH1Q9P2D7 4330 aa9.93□□□□□ -0.82
VAMP4-203ENST00000474047 C9JCJ5 164 aa9.92□□□□□ -0.82
VAMP4-203ENST00000474047 ORM1P02763 201 aa9.92□□□□□ -0.82
VAMP4-203ENST00000474047 S100A4P26447 101 aaKnown RBP9.92□□□□□ -0.82
VAMP4-203ENST00000474047 OR4C5Q8NGB2 326 aa9.92□□□□□ -0.82
VAMP4-203ENST00000474047 GNG13Q9P2W3 67 aa9.92□□□□□ -0.82
VAMP4-203ENST00000474047 C11orf21Q9P2W6 132 aa9.92□□□□□ -0.82
VAMP4-203ENST00000474047 PRO0255Q9UI72 69 aa9.92□□□□□ -0.82
VAMP4-203ENST00000474047 S100A9P06702 114 aaKnown RBP9.91□□□□□ -0.82
VAMP4-203ENST00000474047 SFTA3P0C7M3 94 aa9.91□□□□□ -0.82
VAMP4-203ENST00000474047 SULT1A2P50226 295 aa9.91□□□□□ -0.82
VAMP4-203ENST00000474047 MANBALQ9NQG1 85 aa9.91□□□□□ -0.82
VAMP4-203ENST00000474047 MUC4Q99102 2169 aa9.91□□□□□ -0.82
VAMP4-203ENST00000474047 HYDINQ4G0P3 5121 aa9.91□□□□□ -0.82
VAMP4-203ENST00000474047 VSIG2Q96IQ7 327 aa9.9□□□□□ -0.82
VAMP4-203ENST00000474047 ICOSQ9Y6W8 199 aa9.9□□□□□ -0.82
VAMP4-203ENST00000474047 EPPK1P58107 5090 aaKnown RBP9.9□□□□□ -0.82
VAMP4-203ENST00000474047 NACAE9PAV3 2078 aa9.9□□□□□ -0.82
VAMP4-203ENST00000474047 TRAV4A0A0B4J268 109 aa9.9□□□□□ -0.83
VAMP4-203ENST00000474047 FHL2Q14192 279 aa9.9□□□□□ -0.83
VAMP4-203ENST00000474047 ZNF876PQ49A33 203 aa9.9□□□□□ -0.83
VAMP4-203ENST00000474047 FAM162BQ5T6X4 162 aa9.9□□□□□ -0.83
VAMP4-203ENST00000474047 PCNPQ8WW12 178 aaKnown RBP9.9□□□□□ -0.83
VAMP4-203ENST00000474047 ZC2HC1AQ96GY0 325 aa9.9□□□□□ -0.83
VAMP4-203ENST00000474047 ZNF479Q96JC4 524 aa9.9□□□□□ -0.83
VAMP4-203ENST00000474047 LINC00588Q9Y4M8 146 aa9.9□□□□□ -0.83
VAMP4-203ENST00000474047 TRAV1-1A0A0B4J248 108 aa9.89□□□□□ -0.83
VAMP4-203ENST00000474047 TRBV6-1A0A0K0K1D8 114 aa9.89□□□□□ -0.83
VAMP4-203ENST00000474047 SCO2A0A1W2PP80 73 aa9.89□□□□□ -0.83
VAMP4-203ENST00000474047 B4DEV8 164 aa9.89□□□□□ -0.83
VAMP4-203ENST00000474047 ASIPP42127 132 aa9.89□□□□□ -0.83
VAMP4-203ENST00000474047 C9orf62Q8N4C0 152 aa9.89□□□□□ -0.83
VAMP4-203ENST00000474047 M0R036 132 aa9.88□□□□□ -0.83
VAMP4-203ENST00000474047 SH2D1AO60880 128 aa9.88□□□□□ -0.83
VAMP4-203ENST00000474047 LTAP01374 205 aa9.88□□□□□ -0.83
VAMP4-203ENST00000474047 IFNA1P01562 189 aa9.88□□□□□ -0.83
VAMP4-203ENST00000474047 CRYBA4P53673 196 aa9.88□□□□□ -0.83
VAMP4-203ENST00000474047 CCL20P78556 96 aa9.88□□□□□ -0.83
VAMP4-203ENST00000474047 A0A096LPF7 62 aa9.87□□□□□ -0.83
VAMP4-203ENST00000474047 MRPL23Q16540 153 aaKnown RBP9.87□□□□□ -0.83
VAMP4-203ENST00000474047 ESRGQ1W209 222 aa9.87□□□□□ -0.83
VAMP4-203ENST00000474047 BAGE2Q86Y30 109 aa9.87□□□□□ -0.83
VAMP4-203ENST00000474047 NHLRC2Q8NBF2 726 aa9.87□□□□□ -0.83
VAMP4-203ENST00000474047 IGKV3D-20A0A0C4DH25 116 aa9.87□□□□□ -0.83
VAMP4-203ENST00000474047 A0A1B0GVG6 124 aa9.87□□□□□ -0.83
VAMP4-203ENST00000474047 SOHLH1Q5JUK2 328 aa9.87□□□□□ -0.83
VAMP4-203ENST00000474047 C9orf85Q96MD7 179 aa9.87□□□□□ -0.83
VAMP4-203ENST00000474047 TXNDC17Q9BRA2 123 aa9.87□□□□□ -0.83
VAMP4-203ENST00000474047 RNASE3P12724 160 aaKnown RBP9.86□□□□□ -0.83
VAMP4-203ENST00000474047 CRIP1P50238 77 aa9.86□□□□□ -0.83
VAMP4-203ENST00000474047 COX8CQ7Z4L0 72 aa9.86□□□□□ -0.83
VAMP4-203ENST00000474047 ZNRF2Q8NHG8 242 aa9.86□□□□□ -0.83
VAMP4-203ENST00000474047 Q9H8V8 135 aa9.86□□□□□ -0.83
VAMP4-203ENST00000474047 TMSB15BA0A087X1C1 80 aa9.85□□□□□ -0.83
VAMP4-203ENST00000474047 GRIFINA4D1Z8 144 aa9.85□□□□□ -0.83
VAMP4-203ENST00000474047 PGPEP1LA6NFU8 196 aa9.85□□□□□ -0.83
VAMP4-203ENST00000474047 KRBOX1C9JBD0 128 aa9.85□□□□□ -0.83
VAMP4-203ENST00000474047 GYPEP15421 78 aa9.85□□□□□ -0.83
VAMP4-203ENST00000474047 SRIP30626 198 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms