RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 SPRY2O43597 315 aa13.42□□□□□ -0.26
VARS2-206ENST00000473916 NDUFA7O95182 113 aa13.42□□□□□ -0.26
VARS2-206ENST00000473916 SMIM6P0DI80 62 aa13.42□□□□□ -0.26
VARS2-206ENST00000473916 NTF3P20783 257 aa13.42□□□□□ -0.26
VARS2-206ENST00000473916 OR10J3Q5JRS4 329 aa13.42□□□□□ -0.26
VARS2-206ENST00000473916 KRTAP10-3P60369 221 aa13.42□□□□□ -0.26
VARS2-206ENST00000473916 ZNF124Q15973 351 aa13.42□□□□□ -0.26
VARS2-206ENST00000473916 DYNLRB2Q8TF09 96 aa13.42□□□□□ -0.26
VARS2-206ENST00000473916 ADARB2-AS1A8MUL3 147 aa13.41□□□□□ -0.26
VARS2-206ENST00000473916 TWIST1Q15672 202 aa13.41□□□□□ -0.26
VARS2-206ENST00000473916 DEFB114Q30KQ6 69 aa13.41□□□□□ -0.26
VARS2-206ENST00000473916 CD300EQ496F6 205 aaPredicted RBP13.41□□□□□ -0.26
VARS2-206ENST00000473916 GATD1Q8NB37 220 aa13.41□□□□□ -0.26
VARS2-206ENST00000473916 APRG1Q8IVJ8 170 aa13.4□□□□□ -0.26
VARS2-206ENST00000473916 AMN1Q8IY45 258 aa13.4□□□□□ -0.26
VARS2-206ENST00000473916 OR10AG1Q8NH19 301 aa13.4□□□□□ -0.26
VARS2-206ENST00000473916 JMJD8Q96S16 334 aa13.4□□□□□ -0.26
VARS2-206ENST00000473916 KLLNB2CW77 178 aa13.4□□□□□ -0.26
VARS2-206ENST00000473916 M0R2Z0 102 aa13.4□□□□□ -0.26
VARS2-206ENST00000473916 ESDP10768 282 aa13.4□□□□□ -0.26
VARS2-206ENST00000473916 PAFAH1B2P68402 229 aa13.4□□□□□ -0.26
VARS2-206ENST00000473916 TMEM18Q96B42 140 aa13.4□□□□□ -0.26
VARS2-206ENST00000473916 F8P00451 2351 aa13.4□□□□□ -0.27
VARS2-206ENST00000473916 TRAV12-2A0A075B6T6 113 aa13.39□□□□□ -0.27
VARS2-206ENST00000473916 TRAV21A0A0B4J279 112 aa13.39□□□□□ -0.27
VARS2-206ENST00000473916 KNCNA6PVL3 124 aa13.39□□□□□ -0.27
VARS2-206ENST00000473916 H3BVH4 76 aa13.39□□□□□ -0.27
VARS2-206ENST00000473916 NSUN5P1Q3KNT7 163 aa13.39□□□□□ -0.27
VARS2-206ENST00000473916 ANXA2RQ3ZCQ2 193 aa13.39□□□□□ -0.27
VARS2-206ENST00000473916 ZNF493Q6ZR52 646 aa13.39□□□□□ -0.27
VARS2-206ENST00000473916 TIMM8BQ9Y5J9 83 aaPredicted RBP13.39□□□□□ -0.27
VARS2-206ENST00000473916 A0A1B0GW15 77 aa13.39□□□□□ -0.27
VARS2-206ENST00000473916 DEFB131AP59861 70 aa13.39□□□□□ -0.27
VARS2-206ENST00000473916 URB1-AS1Q96HZ7 61 aa13.39□□□□□ -0.27
VARS2-206ENST00000473916 CNFNQ9BYD5 112 aa13.39□□□□□ -0.27
VARS2-206ENST00000473916 TCF21O43680 179 aa13.38□□□□□ -0.27
VARS2-206ENST00000473916 KCNS1Q96KK3 526 aa13.38□□□□□ -0.27
VARS2-206ENST00000473916 TRBV7-9A0A0J9YWB2 115 aa13.37□□□□□ -0.27
VARS2-206ENST00000473916 GNRH2O43555 120 aa13.37□□□□□ -0.27
VARS2-206ENST00000473916 EBLN2Q6P2I7 272 aa13.37□□□□□ -0.27
VARS2-206ENST00000473916 ZMAT5Q9UDW3 170 aaKnown RBP13.37□□□□□ -0.27
VARS2-206ENST00000473916 TRAV12-3A0A0B4J271 114 aa13.37□□□□□ -0.27
VARS2-206ENST00000473916 SPINK13Q1W4C9 94 aa13.37□□□□□ -0.27
VARS2-206ENST00000473916 FAM19A2Q8N3H0 131 aa13.37□□□□□ -0.27
VARS2-206ENST00000473916 NIT2Q9NQR4 276 aa13.37□□□□□ -0.27
VARS2-206ENST00000473916 MUC4Q99102 2169 aa13.36□□□□□ -0.27
VARS2-206ENST00000473916 PMCHP20382 165 aa13.36□□□□□ -0.27
VARS2-206ENST00000473916 FXYD7P58549 80 aa13.36□□□□□ -0.27
VARS2-206ENST00000473916 FAM104BQ5XKR9 115 aa13.36□□□□□ -0.27
VARS2-206ENST00000473916 TENM1Q9UKZ4 2725 aa13.36□□□□□ -0.27
VARS2-206ENST00000473916 SMKR1H3BMG3 65 aa13.35□□□□□ -0.27
VARS2-206ENST00000473916 FOSL1P15407 271 aa13.35□□□□□ -0.27
VARS2-206ENST00000473916 RNASEKQ6P5S7 137 aaKnown RBP13.35□□□□□ -0.27
VARS2-206ENST00000473916 AMTNQ6UX39 209 aa13.35□□□□□ -0.27
VARS2-206ENST00000473916 FOXI2Q6ZQN5 318 aa13.35□□□□□ -0.27
VARS2-206ENST00000473916 Q6ZWC4 215 aa13.35□□□□□ -0.27
VARS2-206ENST00000473916 SAMD10Q9BYL1 202 aa13.35□□□□□ -0.27
VARS2-206ENST00000473916 PCP4L1A6NKN8 68 aa13.35□□□□□ -0.27
VARS2-206ENST00000473916 D6R8Y8 96 aa13.35□□□□□ -0.27
VARS2-206ENST00000473916 MRPL51Q4U2R6 128 aaKnown RBP13.35□□□□□ -0.27
VARS2-206ENST00000473916 SNAI2O43623 268 aa13.34□□□□□ -0.27
VARS2-206ENST00000473916 GAS8-AS1O95177 125 aa13.34□□□□□ -0.27
VARS2-206ENST00000473916 MAP6D1Q9H9H5 199 aa13.34□□□□□ -0.27
VARS2-206ENST00000473916 ZNF256Q9Y2P7 627 aaPredicted RBP13.34□□□□□ -0.27
VARS2-206ENST00000473916 C7orf71A4D174 169 aa13.34□□□□□ -0.27
VARS2-206ENST00000473916 RBMY1BA6NDE4 496 aaKnown RBP13.34□□□□□ -0.27
VARS2-206ENST00000473916 RBMY1EA6NEQ0 496 aaKnown RBP13.34□□□□□ -0.27
VARS2-206ENST00000473916 CRLF1O75462 422 aa13.34□□□□□ -0.27
VARS2-206ENST00000473916 ZNF324O75467 553 aaPredicted RBP13.34□□□□□ -0.27
VARS2-206ENST00000473916 NCR2O95944 276 aa13.34□□□□□ -0.27
VARS2-206ENST00000473916 OR5AL1P0C617 328 aa13.34□□□□□ -0.27
VARS2-206ENST00000473916 RBMY1DP0C7P1 496 aaKnown RBP13.34□□□□□ -0.27
VARS2-206ENST00000473916 AMTP48728 403 aa13.34□□□□□ -0.27
VARS2-206ENST00000473916 NIT1Q86X76 327 aa13.34□□□□□ -0.27
VARS2-206ENST00000473916 RNF185Q96GF1 192 aa13.34□□□□□ -0.27
VARS2-206ENST00000473916 JMJD1CQ15652 2540 aa13.33□□□□□ -0.28
VARS2-206ENST00000473916 EVI2AP22794 236 aa13.33□□□□□ -0.28
VARS2-206ENST00000473916 LEPP41159 167 aa13.33□□□□□ -0.28
VARS2-206ENST00000473916 PMCHL1Q16048 86 aa13.33□□□□□ -0.28
VARS2-206ENST00000473916 ODF3Q96PU9 254 aa13.33□□□□□ -0.28
VARS2-206ENST00000473916 TMEM191AQ9H0A3 160 aa13.33□□□□□ -0.28
VARS2-206ENST00000473916 TRAV2A0A0B4J234 112 aa13.32□□□□□ -0.28
VARS2-206ENST00000473916 RNASE3P12724 160 aaKnown RBP13.32□□□□□ -0.28
VARS2-206ENST00000473916 ASIPP42127 132 aa13.32□□□□□ -0.28
VARS2-206ENST00000473916 CDKN1BP46527 198 aa13.32□□□□□ -0.28
VARS2-206ENST00000473916 SPANXN1Q5VSR9 72 aa13.32□□□□□ -0.28
VARS2-206ENST00000473916 VWFP04275 2813 aa13.32□□□□□ -0.28
VARS2-206ENST00000473916 H3BMM0 161 aa13.31□□□□□ -0.28
VARS2-206ENST00000473916 DUSP14O95147 198 aaKnown RBP13.31□□□□□ -0.28
VARS2-206ENST00000473916 HLA-DRB4P13762 266 aa13.31□□□□□ -0.28
VARS2-206ENST00000473916 RAB4AP20338 218 aa13.31□□□□□ -0.28
VARS2-206ENST00000473916 S100A4P26447 101 aaKnown RBP13.31□□□□□ -0.28
VARS2-206ENST00000473916 JOSD1Q15040 202 aaPredicted RBP13.31□□□□□ -0.28
VARS2-206ENST00000473916 SPAG8Q99932 426 aaPredicted RBP13.31□□□□□ -0.28
VARS2-206ENST00000473916 HLA-DRB4X5D2U9 266 aa13.31□□□□□ -0.28
VARS2-206ENST00000473916 BAHCC1Q9P281 2608 aa13.31□□□□□ -0.28
VARS2-206ENST00000473916 M0R381 172 aa13.3□□□□□ -0.28
VARS2-206ENST00000473916 RBMY1A1P0DJD3 496 aaKnown RBP13.3□□□□□ -0.28
VARS2-206ENST00000473916 RBMY1CP0DJD4 496 aa13.3□□□□□ -0.28
VARS2-206ENST00000473916 RBMY1FQ15415 496 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms